PDB: 20505 件ウェブページステータス検索Chemie searchBIRD

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1YH8	Crystal structure of Aquifex aeolicus LpxC deacetylase complexed with palmitate 分子名称: CHLORIDE ION, PALMITOLEIC ACID, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ... 著者 Hernick, M, Gennadios, H.A, Whittington, D.A, Rusche, K.M, Christianson, D.W, Fierke, C.A. 登録日 2005-01-07 公開日 2005-02-15 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine Deacetylase Functions through a General Acid-Base Catalyst Pair Mechanism J.Biol.Chem., 280, 2005
2ATB	Triple mutant 8D9D10V of scorpion toxin LQH-alpha-IT 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, NITRATE ION, ... 著者 Kahn, R, Karbat, I, Gurevitz, M, Frolow, F. 登録日 2005-08-24 公開日 2006-09-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 X-ray structures of Lqh-alpha-IT and Lqh-alpha-IT8D9D10V mutant To be Published
2AUX	Cathepsin K complexed with a semicarbazone inhibitor 分子名称: (1R)-2-METHYL-1-(PHENYLMETHYL)PROPYL[(1S)-1-FORMYLPENTYL]CARBAMATE, Cathepsin K 著者 Adkison, K.K, Barrett, D.G, Deaton, D.N, Gampe, R.T, Hassell, A.M, Long, S.T, McFadyen, R.B, Miller, A.B, Miller, L.R, Shewchuk, L.M. 登録日 2005-08-29 公開日 2006-08-08 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Semicarbazone-based inhibitors of cathepsin K, are they prodrugs for aldehyde inhibitors? Bioorg.Med.Chem.Lett., 16, 2006
2AUZ	Cathepsin K complexed with a semicarbazone inhibitor 分子名称: 1-(PHENYLMETHYL)CYCLOPENTYL[(1S)-1-FORMYLPENTYL]CARBAMATE, Cathepsin K, SULFATE ION 著者 Adkison, K.K, Barrett, D.G, Deaton, D.N, Gampe, R.T, Hassell, A.M, Long, S.T, McFadyen, R.B, Miller, A.B, Miller, L.R, Shewchuk, L.M. 登録日 2005-08-29 公開日 2006-08-08 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Semicarbazone-based inhibitors of cathepsin K, are they prodrugs for aldehyde inhibitors? Bioorg.Med.Chem.Lett., 16, 2006
1BVI	RIBONUCLEASE T1 (WILDTYPE) COMPLEXED WITH 2'GMP 分子名称: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1) 著者 Langhorst, U, Loris, R, Denisov, V.P, Doumen, J, Roose, P, Maes, D, Halle, B, Steyaert, J. 登録日 1998-09-15 公開日 1998-09-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Dissection of the structural and functional role of a conserved hydration site in RNase T1. Protein Sci., 8, 1999
5DTO	Dengue virus full length NS5 complexed with viral Cap 0-RNA and SAH 分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, ACETATE ION, MAGNESIUM ION, ... 著者 Zhao, Y, Soh, T.S, Lim, S.P, Chung, K.Y, Swaminathan, K, Vasudevan, S.G, Shi, P.-Y, Lescar, J, Luo, D. 登録日 2015-09-18 公開日 2015-11-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.603 Å) 主引用文献 Molecular basis for specific viral RNA recognition and 2'-O-ribose methylation by the dengue virus nonstructural protein 5 (NS5) Proc.Natl.Acad.Sci.USA, 112, 2015
2D56	Solution Structure of ASABF, Antibacterial Peptide Isolated from a Nematode, Ascaris Suum 分子名称: ASABF 著者 Nakano, M, Aizawa, T, Kamiya, M, Miura, K, Kumaki, Y, Demura, M, Tsuda, S, Kawano, K. 登録日 2005-10-28 公開日 2006-11-14 最終更新日 2022-03-09 実験手法 SOLUTION NMR 主引用文献 Solution structure and function of ASABFd18c, antibacterial peptide isolated from a nematode, asucaris suum To be Published
2DF6	Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2 分子名称: 18-mer from PAK2, Rho guanine nucleotide exchange factor 7 著者 Hoelz, A. 登録日 2006-02-25 公開日 2006-04-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal Structure of the SH3 Domain of betaPIX in Complex with a High Affinity Peptide from PAK2 J.Mol.Biol., 358, 2006
2DWG	RUN domain of Rap2 interacting protein x, crystallized in P2(1)2(1)2(1) space group 分子名称: Protein RUFY3 著者 Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-08-11 公開日 2006-10-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Crystal Structure of the RUN Domain of the RAP2-interacting Protein x J.Biol.Chem., 281, 2006
2BLX	HEWL before a high dose x-ray "burn" 分子名称: LYSOZYME C, TETRAETHYLENE GLYCOL 著者 Nanao, M.H, Ravelli, R.B. 登録日 2005-03-08 公開日 2005-09-07 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Improving Radiation-Damage Substructures for Rip. Acta Crystallogr.,Sect.D, 61, 2005
2BQZ	Crystal structure of a ternary complex of the human histone methyltransferase Pr-SET7 (also known as SET8) 分子名称: HISTONE H4, S-ADENOSYL-L-HOMOCYSTEINE, SET8 PROTEIN 著者 Xiao, B, Jing, C, Kelly, G, Walker, P.A, Muskett, F.W, Frenkiel, T.A, Martin, S.R, Sarma, K, Reinberg, D, Gamblin, S.J, Wilson, J.R. 登録日 2005-04-28 公開日 2005-06-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Specificity and Mechanism of the Histone Methyltransferase Pr-Set7 Genes Dev., 19, 2005
2BVR	Human thrombin complexed with fragment-based small molecules occupying the S1 pocket 分子名称: 2-[2-(4-CHLORO-PHENYLSULFANYL)-ACETYLAMINO]-3-(4-GUANIDINO-PHENYL)-PROPIONAMIDE, ALPHA THROMBIN, HIRUDIN VARIANT-2 著者 Neumann, T, Junker, H.-D, Keil, O, Burkert, K, Ottleben, H, Gamer, J, Sekul, R, Deppe, H, Feurer, A, Tomandl, D, Metz, G. 登録日 2005-07-04 公開日 2006-10-25 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Discovery of Thrombin Inhibitor Fragments from Chemical Microarray Screening Lett.Drug Des.Discovery, 2, 2005
2BVS	Human thrombin complexed with fragment-based small molecules occupying the S1 pocket 分子名称: ALPHA THROMBIN, HIRUDIN VARIANT-2, N-[2-(2-CARBAMOYLMETHOXY-ETHOXY)-ETHYL]-2-[2-(4-CHLORO-PHENYLSULFANYL)-ACETYLAMINO]-3-(4-GUANIDINO-PHENYL)-PROPIONAMIDE 著者 Neumann, T, Junker, H.-D, Keil, O, Burkert, K, Ottleben, H, Gamer, J, Sekul, R, Deppe, H, Feurer, A, Tomandl, D, Metz, G. 登録日 2005-07-04 公開日 2006-10-25 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Discovery of Thrombin Inhibitor Fragments from Chemical Microarray Screening Lett.Drug Des.Discovery, 2, 2005
2BXT	Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker 分子名称: 6-CHLORO-1-(2-{[(5-CHLORO-1-BENZOTHIEN-3-YL)METHYL]AMINO}ETHYL)-3-[(2-PYRIDIN-2-YLETHYL)AMINO]-1,4-DIHYDROPYRAZIN-2-OL, ALPHA THROMBIN, HIRUDIN VARIANT-2 著者 Bulat, S, Bosio, S, Grabowski, E, Papadopoulos, M.A, Cerezo-Galvez, S, Rosenbaum, C, Matassa, V.G, Ott, I, Metz, G, Schamberger, J, Sekul, R, Feurer, A. 登録日 2005-07-27 公開日 2006-10-26 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Design and Discovery of Novel, Potent Pyrazinone-Based Thrombin Inhibitors with a Solubilizing P1-P2-Linker Lett.Drug Des.Discovery, 3, 2006
2BPU	The Kedge Holmium Derivative of Hen Egg-White Lysozyme at high resolution from Single Wavelength Anomalous Diffraction 分子名称: CHLORIDE ION, HOLMIUM ATOM, LYSOZYME C, ... 著者 Jakoncic, J, Di Michiel, M, Zhong, Z, Honkimaki, V, Jouanneau, Y, Stojanoff, V. 登録日 2005-04-25 公開日 2006-08-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Anomalous Diffraction at Ultra-High Energy for Protein Crystallography. J.Appl.Crystallogr., 39, 2006
2BSR	Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705 分子名称: BETA-2-MICROGLOBULIN, EPSTEIN-BARR NUCLEAR ANTIGEN-6, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ... 著者 Stewart-Jones, G.B.E, Di Gleria, K, Kollnberger, S, Mcmichael, A.J, Jones, E.Y, Bowness, P. 登録日 2005-05-23 公開日 2005-05-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705 Eur.J.Immunol., 35, 2005
2BGV	X-ray structure of ferric cytochrome c-550 from Paracoccus versutus 分子名称: CYTOCHROME C-550, HEME C 著者 Worrall, J.A.R, Van Roon, A.-M.M, Ubbink, M, Canters, G.W. 登録日 2005-01-05 公開日 2005-05-11 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Effect of Replacing the Axial Methionine Ligand with a Lysine Residue in Cytochrome C-550 from Paracoccus Versutus Assessed by X-Ray Crystallography and Unfolding. FEBS J., 272, 2005
2BSS	Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705 分子名称: BETA-2-MICROGLOBULIN, HIV PEPTIDE, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN B-27 ALPHA CHAIN 著者 Stewart-Jones, G.B.E, Di Gleria, K, Kollnberger, S, Mcmichael, A.J, Jones, E.Y, Bowness, P. 登録日 2005-05-23 公開日 2005-05-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705 Eur.J.Immunol., 35, 2005
2BNR	Structural and kinetic basis for heightened immunogenicity of T cell vaccines 分子名称: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, SYNTHETIC PEPTIDE, ... 著者 Chen, J.-L, Stewart-Jones, G, Bossi, G, Lissin, N.M, Wooldridge, L, Choi, E.M.L, Held, G, Dunbar, P.R, Esnouf, R.M, Sami, M, Boultier, J.M, Rizkallah, P.J, Renner, C, Sewell, A, van der Merwe, P.A, Jackobsen, B.K, Griffiths, G, Jones, E.Y, Cerundolo, V. 登録日 2005-03-31 公開日 2005-05-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and Kinetic Basis for Heightened Immunogenicity of T Cell Vaccines J.Exp.Med., 201, 2005
2DW7	Crystal structure of D-tartrate dehydratase from Bradyrhizobium japonicum complexed with Mg++ and meso-tartrate 分子名称: Bll6730 protein, MAGNESIUM ION, S,R MESO-TARTARIC ACID 著者 Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2006-08-07 公開日 2006-12-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum Biochemistry, 45, 2006
2DJ9	Solution structure of growth-blocking peptide of the cabbage armyworm, Mamestra brassicae 分子名称: growth-blocking peptide 著者 Umetsu, Y, Kamiya, M, Aizawa, T, Kumaki, Y, Demura, M, Kawano, K. 登録日 2006-03-31 公開日 2007-03-31 最終更新日 2022-03-09 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Growth-blocking Peptide of the Cabbage Armyworm, Mamestra brassicae to be published
2DJC	Solution structure of growth-blocking peptide of the tobacco cutworm, Spodoptera litura 分子名称: growth-blocking peptide 著者 Umetsu, Y, Kamiya, M, Aizawa, T, Kumaki, Y, Demura, M, Kawano, K. 登録日 2006-03-31 公開日 2007-03-31 最終更新日 2022-03-09 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Growth-blocking Peptide of the Tobacco Cutworm, Spodoptera litura to be published
2DOB	Crystal Structure of Human Saposin A 分子名称: CALCIUM ION, Proactivator polypeptide 著者 Prive, G.G, Ahn, V.E. 登録日 2006-04-28 公開日 2006-07-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of saposins A and C. Protein Sci., 15, 2006
2BLI	L29W Mb deoxy 分子名称: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE 著者 Nienhaus, K, Ostermann, A, Nienhaus, G.U, Parak, F.G, Schmidt, M. 登録日 2005-03-04 公開日 2005-04-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Ligand Migration and Protein Fluctuations in Myoglobin Mutant L29W Biochemistry, 44, 2005
2BST	Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705 分子名称: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-27 ALPHA CHAIN PRECURSOR, ... 著者 Stewart-Jones, G.B.E, diGleria, K, Kollnberger, S, McMichael, A.J, Bowness, P, Jones, E.Y. 登録日 2005-05-23 公開日 2005-05-24 最終更新日 2015-05-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705 Eur.J.Immunol., 35, 2005

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