PDB: 41686 件ウェブページステータス検索Chemie searchBIRD

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1N9K	Crystal structure of the bromide adduct of AphA class B acid phosphatase/phosphotransferase from E. coli at 2.2 A resolution 分子名称: BROMIDE ION, Class B acid phosphatase, MAGNESIUM ION 著者 Calderone, V, Forleo, C, Benvenuti, M, Rossolini, G.M, Thaller, M.C, Mangani, S. 登録日 2002-11-25 公開日 2004-02-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The first structure of a bacterial class B Acid phosphatase reveals further structural heterogeneity among phosphatases of the haloacid dehalogenase fold. J.Mol.Biol., 335, 2004
1ZPD	PYRUVATE DECARBOXYLASE FROM ZYMOMONAS MOBILIS 分子名称: CITRIC ACID, MAGNESIUM ION, MONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER, ... 著者 Lu, G, Dobritzsch, D, Schneider, G. 登録日 1998-04-17 公開日 1999-02-02 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 High resolution crystal structure of pyruvate decarboxylase from Zymomonas mobilis. Implications for substrate activation in pyruvate decarboxylases. J.Biol.Chem., 273, 1998
3U0N	Crystal structure of the engineered fluorescent protein mRuby, crystal form 2 分子名称: SULFATE ION, mRuby 著者 Akerboom, J, Looger, L.L, Schreiter, E.R. 登録日 2011-09-28 公開日 2012-10-03 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
3C9S	AaThiL complexed with AMPPCP 分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Thiamine monophosphate kinase 著者 McCulloch, K.M, Kinsland, C, Begley, T.P, Ealick, S.E. 登録日 2008-02-18 公開日 2008-03-18 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural studies of thiamin monophosphate kinase in complex with substrates and products. Biochemistry, 47, 2008
4BA1	Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate 分子名称: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, PHOSPHATE ION, ... 著者 Lorentzen, E, Conti, E. 登録日 2012-09-10 公開日 2012-10-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of a 9-Subunit Archaeal Exosome in Pre-Catalytic States of the Phosphorolytic Reaction. Archaea, 2012, 2012
4BA2	Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate 分子名称: 5'-R(*AP*AP*AP*AP)-3', PENTAETHYLENE GLYCOL, PHOSPHATE ION, ... 著者 Lorentzen, E, Conti, E. 登録日 2012-09-10 公開日 2012-10-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.501 Å) 主引用文献 Crystal Structure of a 9-Subunit Archaeal Exosome in Pre-Catalytic States of the Phosphorolytic Reaction. Archaea, 2012, 2012
3U0K	Crystal Structure of the genetically encoded calcium indicator RCaMP 分子名称: ACETATE ION, CALCIUM ION, RCaMP 著者 Akerboom, J, Looger, L.L, Schreiter, E.R. 登録日 2011-09-28 公開日 2012-10-03 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
1F44	CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEX 分子名称: CRE RECOMBINASE, DNA (5'- D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*GP*C)-3'), DNA (5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3') 著者 Baldwin, E.P, Woods, K.C. 登録日 2000-06-07 公開日 2001-10-12 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Quasi-equivalence in site-specific recombinase structure and function: crystal structure and activity of trimeric Cre recombinase bound to a three-way Lox DNA junction. J.Mol.Biol., 313, 2001
2Q1N	Actin Dimer Cross-linked Between Residues 41 and 374 分子名称: Actin, alpha skeletal muscle, CALCIUM ION, ... 著者 Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Adisetiyo, H, Reisler, E, Yeates, T.O. 登録日 2007-05-25 公開日 2007-06-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Multiple crystal structures of actin dimers and their implications for interactions in the actin filament. Acta Crystallogr.,Sect.D, 64, 2008
3C9T	AaThiL complexed with AMPPCP and TMP 分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, THIAMIN PHOSPHATE, ... 著者 McCulloch, K.M, Kinsland, C, Begley, T.P, Ealick, S.E. 登録日 2008-02-18 公開日 2008-03-18 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural studies of thiamin monophosphate kinase in complex with substrates and products. Biochemistry, 47, 2008
2Q36	Actin Dimer Cross-linked between Residues 191 and 374 and complexed with Kabiramide C 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Reisler, E, Yeates, T.O. 登録日 2007-05-29 公開日 2007-06-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Multiple crystal structures of actin dimers and their implications for interactions in the actin filament. Acta Crystallogr.,Sect.D, 64, 2008
3C7T	Crystal structure of the ecdysone phosphate phosphatase, EPPase, from Bombix mori in complex with tungstate 分子名称: CHLORIDE ION, Ecdysteroid-phosphate phosphatase, IODIDE ION, ... 著者 Chen, Y, Carpino, N, Nassar, N. 登録日 2008-02-08 公開日 2009-03-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural and functional characterization of the c-terminal domain of the ecdysteroid phosphate phosphatase from Bombyx mori reveals a new enzymatic activity. Biochemistry, 47, 2008
3C9U	AaThiL complexed with ADP and TPP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THIAMINE DIPHOSPHATE, ... 著者 McCulloch, K.M, Kinsland, C, Begley, T.P, Ealick, S.E. 登録日 2008-02-18 公開日 2008-03-18 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structural studies of thiamin monophosphate kinase in complex with substrates and products. Biochemistry, 47, 2008
3U0L	Crystal structure of the engineered fluorescent protein mRuby, crystal form 1, pH 4.5 分子名称: ACETATE ION, mRuby 著者 Akerboom, J, Looger, L.L, Schreiter, E.R. 登録日 2011-09-28 公開日 2012-10-03 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
3U0M	Crystal structure of the engineered fluorescent protein mRuby, crystal form 1, pH 8.5 分子名称: mRuby 著者 Akerboom, J, Looger, L.L, Schreiter, E.R. 登録日 2011-09-28 公開日 2012-10-03 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
4OCX	Fab complex with methotrexate 分子名称: Fab ADD056 Heavy Chain, Fab ADD056 Light Chain, N-(4-{[(2,4-DIAMINOPTERIDIN-1-IUM-6-YL)METHYL](METHYL)AMINO}BENZOYL)-L-GLUTAMIC ACID 著者 Longenecker, K.L, Judge, R.A, Gayda, S, Manoj, S, Saldana, S, Ruan, Q, Swift, K, Tetin, S. 登録日 2014-01-09 公開日 2014-07-02 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Water channel in the binding site of a high affinity anti-methotrexate antibody. Biochemistry, 53, 2014
3L7C	Crystal Structure of Glycogen Phosphorylase DK4 complex 分子名称: 1-(3-deoxy-3-fluoro-beta-D-glucopyranosyl)-5-fluoropyrimidine-2,4(1H,3H)-dione, Glycogen phosphorylase, muscle form 著者 Tsirkone, V.G, Lamprakis, C, Hayes, J.M, Skamnaki, V, Drakou, C, Zographos, S.E, Leonidas, D.D. 登録日 2009-12-28 公開日 2010-10-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies. Bioorg.Med.Chem., 18, 2010
4D8L	Crystal structure of the 2-pyrone-4,6-dicarboxylic acid hydrolase from sphingomonas paucimobilis 分子名称: 2-pyrone-4,6-dicarbaxylate hydrolase 著者 Malashkevich, V.N, Toro, R, Bonanno, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2012-01-10 公開日 2012-01-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and Catalytic Mechanism of LigI: Insight into the Amidohydrolase Enzymes of cog3618 and Lignin Degradation. Biochemistry, 51, 2012
7OW7	EIF6-bound large subunit of the human ribosome 分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S rRNA, ... 著者 Faille, A, Warren, A.J. 登録日 2021-06-16 公開日 2022-10-05 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structure of human EIF6-bound large ribosomal subunit To Be Published
7OLA	Structure of Primase-Helicase in SaPI5 分子名称: DNA primase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 著者 Qiao, C.C, Mir-Sanchis, I. 登録日 2021-05-19 公開日 2022-07-13 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility. Nucleic Acids Res., 50, 2022
7OZH	PMCA-amplified alpha-synuclein fibril polymorph, Multiple System Atrophy patient-derived seeds 分子名称: Alpha-synuclein 著者 Frieg, B, Geraets, J.A, Schroeder, G.F. 登録日 2021-06-28 公開日 2022-07-13 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 alpha-synuclein polymorphism determines oligodendroglial dysfunction To Be Published
7OM0	Structure of Primase-Helicase in SaPI5 分子名称: DNA primase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 著者 Qiao, C.C, Mir-Sanchis, I. 登録日 2021-05-21 公開日 2022-07-13 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility. Nucleic Acids Res., 50, 2022
7P74	The PDZ domain of SYNJ2BP complexed with the phosphorylated PDZ-binding motif of RSK1 分子名称: CALCIUM ION, GLYCEROL, Ribosomal protein S6 kinase alpha-1, ... 著者 Gogl, G, Cousido-Siah, A, Trave, G. 登録日 2021-07-19 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7P4U	Crystal structure of PqsR (MvfR) ligand-binding domain in complex with 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE 分子名称: Transcriptional regulator MvfR, ~{N}-[[2-(3-chloranyl-4-propan-2-yloxy-phenyl)pyrimidin-5-yl]methyl]-2-(trifluoromethyl)pyridin-4-amine 著者 Schmelz, S, Blankenfeldt, W. 登録日 2021-07-13 公開日 2022-07-27 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Towards Translation of PqsR Inverse Agonists: From In Vitro Efficacy Optimization to In Vivo Proof-of-Principle. Adv Sci, 10, 2023
7P70	The PDZ-domain of SNTB1 complexed with the PDZ-binding motif of HPV35-E6 分子名称: Beta-1-syntrophin,Annexin A2, CALCIUM ION, GLYCEROL, ... 著者 Gogl, G, Cousido-Siah, A, Trave, G. 登録日 2021-07-19 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022

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