PDB: 45176 件ウェブページステータス検索Chemie searchBIRD

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359D	INHIBITION OF THE HAMMERHEAD RIBOZYME CLEAVAGE REACTION BY SITE-SPECIFIC BINDING OF TB(III) 分子名称: RNA HAMMERHEAD RIBOZYME, TERBIUM(III) ION 著者 Feig, A.L, Scott, W.G, Uhlenbeck, O.C. 登録日 1997-10-27 公開日 1997-11-07 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Inhibition of the hammerhead ribozyme cleavage reaction by site-specific binding of Tb. Science, 279, 1998
303D	META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL OUT' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2 分子名称: 3-[5-[5-(4-METHYL-PIPERAZIN-1-YL)-1H-IMIDAZO[4,5-B]PYRIDIN-2-YL]-BENZIMIDAZOL-2-YL]-PHENOL, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION 著者 Clark, G.R, Squire, C.J, Gray, E.J, Leupin, W, Neidle, S. 登録日 1996-06-26 公開日 1997-01-20 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Designer DNA-binding drugs: the crystal structure of a meta-hydroxy analogue of Hoechst 33258 bound to d(CGCGAATTCGCG)2. Nucleic Acids Res., 24, 1996
308D	BINDING OF DAUNOMYCIN TO B-D-GLUCOSYLATED DNA FOUND IN PROTOZOA TRYPANOSOMA BRUCEI STUDIED BY X-RAY CRYSTALLOGRAPH 分子名称: DAUNOMYCIN, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), MAGNESIUM ION, ... 著者 Gao, Y.-G, Robinson, H, Wijsman, E.R, Van Der Marel, G.A, Van Boom, J.H, Wang, A.H.-J. 登録日 1997-01-15 公開日 1997-01-21 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Binding of Daunomycin to beta-D-Glucosylated DNA Found in Protozoa Trypanosoma brucei Studied by X-Ray Crystallography J.Am.Chem.Soc., 119, 1997
326D	CRYSTAL STRUCTURES OF D(CM5CGGGCCM5CGG)-ORTHOGONAL FORM 分子名称: DNA (5'-D(*CP*(5CM)P*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3'), SPERMINE 著者 Tippin, D.B, Sundaralingam, M. 登録日 1997-03-17 公開日 1997-05-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
317D	STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS 分子名称: DNA (5'-D(*CP*CP*CP*TP*AP*GP*GP*G)-3') 著者 Tippin, D.B, Sundaralingam, M. 登録日 1997-03-17 公開日 1997-05-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of d(CCCTAGGG): comparison with nine isomorphous octamer sequences reveals four distinct patterns of sequence-dependent intermolecular interactions. Acta Crystallogr.,Sect.D, 52, 1996
368D	STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) 分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') 著者 Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L, Malinina, L. 登録日 1997-12-19 公開日 1998-07-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG) J.Biomol.Struct.Dyn., 15, 1997
393D	CRYSTAL STRUCTURE OF TWO SELF-COMPLEMENTARY CHIMERIC DECAMER D(CCGG)R(C)D(GCCGG) AND D(CCGG)R(CG)D(CCGG) 分子名称: DNA/RNA (5'-D(*CP*CP*GP*GP)-R(*CP)-D(*GP*CP*CP*GP*G)-3') 著者 Ban, C, Sundaralingam, M, Ramakrishnan, B. 登録日 1998-04-29 公開日 1998-05-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of Two Self-Complementary Chimeric Decamer d(CCGG)r(C)d(GCCGG) and d(CCGG)r(CG)d(CCGG) To be Published
322D	CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-HEXAGONAL FORM 分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3') 著者 Tippin, D.B, Sundaralingam, M. 登録日 1997-03-17 公開日 1997-05-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
6V4Q	Crystal structure of a MR78-like antibody naive-1 Fab 分子名称: GLYCEROL, ISOPROPYL ALCOHOL, Naive-1 Fab heavy chain, ... 著者 Bozhanova, N.G, Crowe, J.E, Meiler, J. 登録日 2019-11-28 公開日 2020-11-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Discovery of Marburg virus neutralizing antibodies from virus-naive human antibody repertoires using large-scale structural predictions. Proc.Natl.Acad.Sci.USA, 117, 2020
305D	SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE TETRAGONAL FORM 分子名称: DISTAMYCIN A, DNA (5'-D(*IP*CP*AP*TP*AP*TP*IP*C)-3'), MAGNESIUM ION 著者 Chen, X, Ramakrishnan, B, Sundaralingam, M. 登録日 1997-01-03 公開日 1997-09-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Crystal structures of the side-by-side binding of distamycin to AT-containing DNA octamers d(ICITACIC) and d(ICATATIC). J.Mol.Biol., 267, 1997
3A43	Crystal structure of HypA 分子名称: Hydrogenase nickel incorporation protein hypA, ZINC ION 著者 Watanabe, S, Arai, T, Matsumi, R, Aromi, H, Imanaka, T, Miki, K. 登録日 2009-06-30 公開日 2009-10-06 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation. J.Mol.Biol., 394, 2009
312D	Z-DNA HEXAMER WITH 5' OVERHANGS THAT FORM A REVERSE WATSON-CRICK BASE PAIR 分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*CP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*CP*GP*CP*G)-3'), ... 著者 Mooers, B.H.M, Eichman, B.F, Ho, P.S. 登録日 1997-02-04 公開日 1997-08-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The structures and relative stabilities of d(G x G) reverse Hoogsteen, d(G x T) reverse wobble, and d(G x C) reverse Watson-Crick base-pairs in DNA crystals. J.Mol.Biol., 269, 1997
8AMM	Crystal structure of AUGUGGCAU duplex with cesium ions 分子名称: CESIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3') 著者 Kiliszek, A, Rypniewski, W. 登録日 2022-08-03 公開日 2022-11-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair. Rna, 29, 2022
8AMN	Crystal structure of AUGUGGCAU duplex with strontium ions 分子名称: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), STRONTIUM ION 著者 Kiliszek, A, Rypniewski, W. 登録日 2022-08-03 公開日 2022-11-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair. Rna, 29, 2022
394D	CRYSTAL STRUCTURE OF TWO SELF-COMPLEMENTARY CHIMERIC DECAMERS D(CCGG)R(C)D(GCCGG) AND D(CCGG)R(CG)D(CCGG) 分子名称: DNA/RNA (5'-D(*CP*CP*GP*GP)-R(*CP*GP)-D(*CP*CP*GP*G)-3') 著者 Ban, C, Sundaralingam, M. 登録日 1998-04-29 公開日 1998-05-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Two Self-Complementary Chimeric Decamers d(CCGG)r(C)d(GCCGG) and d(CCGG)r(CG)d(CCGG) To be Published
3A58	Crystal structure of Sec3p - Rho1p complex from Saccharomyces cerevisiae 分子名称: Exocyst complex component SEC3, GTP-binding protein RHO1, MAGNESIUM ION, ... 著者 Yamashita, M, Sato, Y, Yamagata, A, Mimura, H, Yoshikawa, A, Fukai, S. 登録日 2009-08-03 公開日 2010-01-12 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for the Rho- and phosphoinositide-dependent localization of the exocyst subunit Sec3 Nat.Struct.Mol.Biol., 17, 2010
301D	CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MG(II)-SOAKED 分子名称: MAGNESIUM ION, RNA HAMMERHEAD RIBOZYME 著者 Scott, W.G, Murray, J.B, Arnold, J.R.P, Stoddard, B.L, Klug, A. 登録日 1996-12-14 公開日 1997-01-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme. Science, 274, 1996
306D	SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICITACIC) 分子名称: DISTAMYCIN A, DNA (5'-D(*IP*CP*IP*TP*AP*CP*IP*C)-3'), MAGNESIUM ION 著者 Chen, X, Ramakrishnan, B, Sundaralingam, M. 登録日 1997-01-03 公開日 1997-09-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structures of the side-by-side binding of distamycin to AT-containing DNA octamers d(ICITACIC) and d(ICATATIC). J.Mol.Biol., 267, 1997
313D	Z-DNA HEXAMER WITH 5' OVERHANGS THAT FORM A REVERSE HOOGSTEEN BASE PAIR 分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*(5CM)P*GP*CP*GP*CP*G)-3'), MAGNESIUM ION 著者 Mooers, B.H.M, Eichman, B.F, Ho, P.S. 登録日 1997-02-04 公開日 1997-08-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 The structures and relative stabilities of d(G x G) reverse Hoogsteen, d(G x T) reverse wobble, and d(G x C) reverse Watson-Crick base-pairs in DNA crystals. J.Mol.Biol., 269, 1997
321D	CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM 分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'), SPERMINE 著者 Tippin, D.B, Sundaralingam, M. 登録日 1997-03-17 公開日 1997-05-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
379D	THE STRUCTURAL BASIS OF HAMMERHEAD RIBOZYME SELF-CLEAVAGE 分子名称: COBALT (II) ION, RNA (5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*A P*GP*UP*CP*AP*CP*CP*AP*C)-3'), RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3') 著者 Murray, J.B, Terwey, D.P, Maloney, L, Karpeisky, A, Usman, N, Beigelman, L, Scott, W.G. 登録日 1998-02-05 公開日 1998-02-11 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The structural basis of hammerhead ribozyme self-cleavage. Cell(Cambridge,Mass.), 92, 1998
332D	CRYSTAL STRUCTURE OF R(GUGUGUA)D(C) WITH TANDEM G-U/U-G WOBBLE PAIRS WITH STRAND SLIPPAGE 分子名称: DNA/RNA (5'-R(*GP*UP*GP*UP*GP*UP*AP*)-D(*C)-3') 著者 Biswas, R, Sundaralingam, M. 登録日 1997-05-14 公開日 1997-09-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Crystal structure of r(GUGUGUA)dC with tandem G x U/U x G wobble pairs with strand slippage. J.Mol.Biol., 270, 1997
399D	STRUCTURE OF D(CGCCCGCGGGCG) 分子名称: DNA (5'-D(*CP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*G)-3') 著者 Malinina, L, Fernandez, L.G, Subirana, J.A. 登録日 1998-05-11 公開日 1999-01-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the d(CGCCCGCGGGCG) dodecamer: a kinked A-DNA molecule showing some B-DNA features. J.Mol.Biol., 285, 1999
357D	3.5 A structure of fragment I from E. coli 5S RRNA 分子名称: MAGNESIUM ION, MERCURY (II) ION, RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP* GP*CP*CP*AP*GP*GP*CP*AP*U)-3'), ... 著者 Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A. 登録日 1997-10-09 公開日 1997-12-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain. Cell(Cambridge,Mass.), 91, 1997
371D	STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) 分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') 著者 Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L. 登録日 1997-12-19 公開日 1998-07-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG) J.Biomol.Struct.Dyn., 15, 1997

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