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7QQA
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MgADP-bound Fe protein of the iron-only nitrogenase from Azotobacter vinelandii
分子名称: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Trncik, C, Mueller, T, Franke, P, Einsle, O.
登録日2022-01-07
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献MgADP-bound Fe protein of the iron-only nitrogenase from Azotobacter vinelandii
Journal of Inorganic Biochemistry, 227, 2022
7BI7
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BU of 7bi7 by Molmil
An Unexpected P-Cluster like Intermediate En Route to the Nitrogenase FeMo-co
分子名称: FE(8)-S(7) CLUSTER, FeMo cofactor biosynthesis protein NifB, HYDROSULFURIC ACID, ...
著者Jenner, L.P, Cherrier, M.V, Amara, P, Rubio, L.M, Nicolet, Y.
登録日2021-01-12
公開日2021-03-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献An unexpected P-cluster like intermediate en route to the nitrogenase FeMo-co.
Chem Sci, 12, 2021
3PDI
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BU of 3pdi by Molmil
Precursor bound NifEN
分子名称: IRON/SULFUR CLUSTER, L-Cluster (Fe8S9), Nitrogenase MoFe cofactor biosynthesis protein NifE, ...
著者Kaiser, J.T, Hu, Y, Wiig, J.A, Rees, D.C, Ribbe, M.W.
登録日2010-10-22
公開日2011-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of Precursor-Bound NifEN: A Nitrogenase FeMo Cofactor Maturase/Insertase.
Science, 331, 2011
3FWY
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BU of 3fwy by Molmil
Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase (BchL) with MgADP bound: a homologue of the nitrogenase Fe protein
分子名称: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein, ...
著者Sarma, R, Barney, B.M, Hamilton, T.L, Jones, A, Seefeldt, L.C, Peters, J.W.
登録日2009-01-19
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal Structure of the L Protein of Rhodobacter sphaeroides Light-Independent Protochlorophyllide Reductase with MgADP Bound: A Homologue of the Nitrogenase Fe Protein.
Biochemistry, 47, 2008
8BOQ
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BU of 8boq by Molmil
A. vinelandii Fe-nitrogenase FeFe protein
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE(8)-S(7) CLUSTER, Fe-only nitrogenase, ...
著者Trncik, C, Detemple, F, Einsle, O.
登録日2022-11-15
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.547 Å)
主引用文献Iron-only Fe-nitrogenase underscores common catalytic principles in biological nitrogen fixation
Nat Catal, 2023
6OP1
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BU of 6op1 by Molmil
Selenium incorporated, carbon monoxide inhibited FeMo-cofactor of azotobacter vinelandii
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, CARBON MONOXIDE, ...
著者Arias, R.J, Rees, D.C.
登録日2019-04-24
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Localized Electronic Structure of Nitrogenase FeMoco Revealed by Selenium K-Edge High Resolution X-ray Absorption Spectroscopy.
J.Am.Chem.Soc., 141, 2019
7UT6
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BU of 7ut6 by Molmil
C1 symmetric cryoEM structure of Azotobacter vinelandii MoFeP under non-turnover conditions
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
著者Rutledge, H.L, Cook, B, Tezcan, F.A, Herzik, M.A.
登録日2022-04-26
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (1.91 Å)
主引用文献Structures of the nitrogenase complex prepared under catalytic turnover conditions.
Science, 377, 2022
7UT7
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C2 symmetric cryoEM structure of Azotobacter vinelandii MoFeP under non-turnover conditions
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
著者Rutledge, H.L, Cook, B.D, Tezcan, F.A, Herzik, M.A.
登録日2022-04-26
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (1.91 Å)
主引用文献Structures of the nitrogenase complex prepared under catalytic turnover conditions.
Science, 377, 2022
2KIC
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BU of 2kic by Molmil
n-NafY. N-terminal domain of NafY
分子名称: Nitrogenase gamma subunit
著者Phillips, A.H, Hernandez, J.A, Erbil, K, Pelton, J.G, Wemmer, D.E, Rubio, L.M.
登録日2009-05-01
公開日2010-12-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Biological activity and solution structure of the apo-dinitrogenase binding domain of NafY
J.Biol.Chem., 2010
7MCI
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BU of 7mci by Molmil
MoFe protein from Azotobacter vinelandii with a sulfur-replenished cofactor
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(8)-S(7) CLUSTER, ...
著者Kang, W, Lee, C, Hu, Y, Ribbe, M.W.
登録日2021-04-02
公開日2022-05-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Evidence of substrate binding and product release via belt-sulfur mobilization of the nitrogenase cofactor
Nat Catal, 5, 2022
6RK0
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BU of 6rk0 by Molmil
Structure of the Flavocytochrome Anf3 from Azotobacter vinelandii
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
著者Murray, J.W, Varghese, F, Kabasakal, B.
登録日2019-04-29
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献A low-potential terminal oxidase associated with the iron-only nitrogenase from the nitrogen-fixing bacteriumAzotobacter vinelandii.
J.Biol.Chem., 294, 2019
5FFI
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BU of 5ffi by Molmil
[2Fe:2S] ferredoxin FeSII from Azotobacter vinelandii
分子名称: Dimeric (2Fe-2S) protein, FE2/S2 (INORGANIC) CLUSTER
著者Schlesier, J, Rohde, M, Gerhardt, S, Einsle, O.
登録日2015-12-18
公開日2016-01-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献A Conformational Switch Triggers Nitrogenase Protection from Oxygen Damage by Shethna Protein II (FeSII).
J.Am.Chem.Soc., 138, 2016
2YNM
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BU of 2ynm by Molmil
Structure of the ADPxAlF3-Stabilized Transition State of the Nitrogenase-like Dark-Operative Protochlorophyllide Oxidoreductase Complex from Prochlorococcus marinus with Its Substrate Protochlorophyllide a
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
著者Krausze, J, Lange, C, Heinz, D.W, Moser, J.
登録日2012-10-16
公開日2013-01-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Adp-Aluminium Fluoride-Stabilized Protochlorophyllide Oxidoreductase Complex.
Proc.Natl.Acad.Sci.USA, 110, 2013
2XDQ
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BU of 2xdq by Molmil
Dark Operative Protochlorophyllide Oxidoreductase (ChlN-ChlB)2 Complex
分子名称: 1-METHYLGUANIDINE, IRON/SULFUR CLUSTER, LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B, ...
著者Broecker, M.J, Schomburg, S, Heinz, D.W, Jahn, D, Schubert, W.-D, Moser, J.
登録日2010-05-06
公開日2010-06-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Nitrogenase-Like Dark Operative Protochlorophyllide Oxidoreductase Catalytic Complex (Chln/Chlb)2.
J.Biol.Chem., 285, 2010
3O5T
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BU of 3o5t by Molmil
Structure of DraG-GlnZ complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Dinitrogenase reductase activacting glicohydrolase, MAGNESIUM ION, ...
著者Rajendran, C, Li, X.-D, Winkler, F.K.
登録日2010-07-28
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of the GlnZ-DraG complex reveals a different form of PII-target interaction
Proc.Natl.Acad.Sci.USA, 108, 2011
2WOD
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BU of 2wod by Molmil
Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP- ribsoyllysine
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, CHLORIDE ION, GLYCEROL, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-11
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WOE
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BU of 2woe by Molmil
Crystal Structure of the D97N variant of dinitrogenase reductase- activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP-ribose
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WOC
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BU of 2woc by Molmil
Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, CHLORIDE ION, FORMIC ACID, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
3AET
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BU of 3aet by Molmil
Structure of the light-independent protochlorophyllide reductase catalyzing a key reduction for greening in the dark
分子名称: IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase subunit B, Light-independent protochlorophyllide reductase subunit N
著者Muraki, N, Nomata, J, Shiba, T, Fujita, Y, Kurisu, G.
登録日2010-02-10
公開日2010-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献X-ray crystal structure of the light-independent protochlorophyllide reductase
Nature, 465, 2010
2RE2
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BU of 2re2 by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE IRON-MOLYBDENUM COFACTOR (FEMO-CO) DINITROGENASE (TA1041M) FROM THERMOPLASMA ACIDOPHILUM DSM 1728 AT 1.30 A RESOLUTION
分子名称: Uncharacterized protein Ta1041
著者Joint Center for Structural Genomics (JCSG)
登録日2007-09-25
公開日2007-10-09
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of protein of unknown function (NP_394501.1) from Thermoplasma acidophilum at 1.30 A resolution
To be published
2KLA
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BU of 2kla by Molmil
NMR STRUCTURE OF A PUTATIVE DINITROGENASE (MJ0327) FROM METHANOCOCCUS JANNASCHII
分子名称: Uncharacterized protein MJ0327
著者Jaudzems, K, Mohanty, B, Geralt, M, Serrano, P, Wilson, I, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
登録日2009-06-30
公開日2009-08-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NMR structure of the protein NP_247299.1: comparison with the crystal structure.
Acta Crystallogr.,Sect.F, 66, 2010
2QTD
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BU of 2qtd by Molmil
Crystal structure of a putative dinitrogenase (mj0327) from methanocaldococcus jannaschii dsm at 1.70 A resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TETRAETHYLENE GLYCOL, Uncharacterized protein MJ0327
著者Joint Center for Structural Genomics (JCSG)
登録日2007-08-01
公開日2007-08-21
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献NMR structure of the protein NP_247299.1: comparison with the crystal structure.
Acta Crystallogr.,Sect.F, 66, 2010
1O13
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Crystal structure of a putative dinitrogenase iron-molybdenum cofactor (tm1816) from thermotoga maritima at 1.83 A resolution
分子名称: probable NifB protein
著者Joint Center for Structural Genomics (JCSG)
登録日2002-10-15
公開日2002-12-18
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structure of probable NifB protein that is involved in FeMo-Co biosynthesis TM1816 from Thermotoga maritima at 1.83 A resolution
To be published
3AEQ
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BU of 3aeq by Molmil
Structure of the light-independent protochlorophyllide reductase catalyzing a key reduction for greening in the dark
分子名称: IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase subunit B, Light-independent protochlorophyllide reductase subunit N, ...
著者Muraki, N, Nomata, J, Shiba, T, Fujita, Y, Kurisu, G.
登録日2010-02-10
公開日2010-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献X-ray crystal structure of the light-independent protochlorophyllide reductase
Nature, 465, 2010
3AES
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BU of 3aes by Molmil
Structure of the light-independent protochlorophyllide reductase catalyzing a key reduction for greening in the dark
分子名称: IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase subunit B, Light-independent protochlorophyllide reductase subunit N
著者Muraki, N, Nomata, J, Shiba, T, Fujita, Y, Kurisu, G.
登録日2010-02-10
公開日2010-04-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献X-ray crystal structure of the light-independent protochlorophyllide reductase
Nature, 465, 2010

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