Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Z2V
DownloadVisualize
BU of 4z2v by Molmil
Crystal structure of short hoefavidin-hoef-peptide complex
分子名称: Avidin family, Hoef-peptide
著者Livnah, O, Avraham, O.
登録日2015-03-30
公開日2015-07-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4I60
DownloadVisualize
BU of 4i60 by Molmil
Crystal structure of avidin - biotinylruthenocene complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}cyclopentadienyl]ruthenium
著者Strzelczyk, P, Bujacz, A, Bujacz, G.
登録日2012-11-29
公開日2013-08-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural investigation of the interactions of biotinylruthenocene with avidin.
Chem.Biol.Interact, 204, 2013
4Z27
DownloadVisualize
BU of 4z27 by Molmil
Crystal structure of apo short hoefavidin
分子名称: Avidin family
著者Livnah, O, Avraham, O.
登録日2015-03-29
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
6AUE
DownloadVisualize
BU of 6aue by Molmil
Artificial Metalloproteins Containing a Co4O4 Active Site - 2xm-S112Y-b
分子名称: N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine, Streptavidin
著者Olshansky, L, Vallapurakal, J, Huerta-Lavorie, R, Nguyen, A.I, Tilley, T.D, Borovik, A.S.
登録日2017-08-31
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Artificial Metalloproteins Containing Co
J. Am. Chem. Soc., 140, 2018
2A5C
DownloadVisualize
BU of 2a5c by Molmil
Structure of Avidin in complex with the ligand 8-oxodeoxyadenosine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8-OXODEOXYADENOSINE, Avidin
著者Conners, R, Hooley, E, Thomas, S, Brady, R.L.
登録日2005-06-30
公開日2006-05-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Recognition of oxidatively modified bases within the biotin-binding site of avidin.
J.Mol.Biol., 357, 2006
7CQ0
DownloadVisualize
BU of 7cq0 by Molmil
Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
分子名称: Mature Streptoavidin-C1
著者Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
登録日2020-08-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
7CPZ
DownloadVisualize
BU of 7cpz by Molmil
Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
分子名称: BIOTIN, Mature Streptoavidin-C1
著者Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
登録日2020-08-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
2A5B
DownloadVisualize
BU of 2a5b by Molmil
Avidin complexed with 8-oxodeoxyguanosine
分子名称: 2'-DEOXY-8-OXOGUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Conners, R, Hooley, E, Thomas, S, Brady, R.L.
登録日2005-06-30
公開日2006-05-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Recognition of oxidatively modified bases within the biotin-binding site of avidin.
J.Mol.Biol., 357, 2006
4IRW
DownloadVisualize
BU of 4irw by Molmil
Co-crystallization of streptavidin-biotin complex with a lanthanide-ligand complex gives rise to a novel crystal form
分子名称: BIOTIN, PYRIDINE-2,6-DICARBOXYLIC ACID, SODIUM ION, ...
著者Bandara, R.A.M.S.S, Liu, D.Q, Hindupur, A, Tesh, K.F, Fox, R.O.
登録日2013-01-15
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.396 Å)
主引用文献Co-crystallization of streptavidin-biotin complex with a lanthanide-ligand complex gives rise to a novel crystal form
To be Published
1HY2
DownloadVisualize
BU of 1hy2 by Molmil
MINIPROTEIN MP-1 COMPLEX WITH STREPTAVIDIN
分子名称: MP-1, STREPTAVIDIN
著者Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
登録日2001-01-17
公開日2003-06-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-Protein Complexes
To be Published
1HXL
DownloadVisualize
BU of 1hxl by Molmil
MINIPROTEIN MP-2 (V10A) COMPLEX WITH STREPTAVIDIN
分子名称: MP-2, STREPTAVIDIN
著者Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
登録日2001-01-16
公開日2003-06-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-Protein Complexes
To be Published
1HXZ
DownloadVisualize
BU of 1hxz by Molmil
MINIPROTEIN MP-2 COMPLEX WITH STREPTAVIDIN
分子名称: MP-2, STREPTAVIDIN
著者Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
登録日2001-01-17
公開日2003-06-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-Protein Complexes
To be Published
1IJ8
DownloadVisualize
BU of 1ij8 by Molmil
CRYSTAL STRUCTURE OF LITE AVIDIN-BNI COMPLEX
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, AVIDIN
著者Livnah, O, Huberman, T.
登録日2001-04-25
公開日2001-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences.
J.Biol.Chem., 276, 2001
1I9H
DownloadVisualize
BU of 1i9h by Molmil
CORE STREPTAVIDIN-BNA COMPLEX
分子名称: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, STREPTAVIDIN
著者Livnah, O, Huberman, T, Wilchek, M, Bayer, E.A, Eisenberg-Domovich, Y.
登録日2001-03-20
公開日2001-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences.
J.Biol.Chem., 276, 2001
7ZX9
DownloadVisualize
BU of 7zx9 by Molmil
Streptavidin with a fluorescent substrate
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(3,4-dihydro-1~{H}-isoquinolin-2-yl)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-05-20
公開日2022-06-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.546 Å)
主引用文献Streptavidin Iron-Porphyrin
To Be Published
7ZXZ
DownloadVisualize
BU of 7zxz by Molmil
dithiol-ligand bound to streptavidin
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[(1~{R},3~{S})-3-[3,5-bis(sulfanylmethyl)phenyl]-2,4-bis(oxidanylidene)cyclopentyl]pentanamide, DI(HYDROXYETHYL)ETHER, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-05-23
公開日2022-06-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献dithiol-ligand bound to streptavidin
To Be Published
7ZOF
DownloadVisualize
BU of 7zof by Molmil
Streptavidin Iron-Porphyrin
分子名称: (2R)-2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-3-[[(5Z,10Z,14Z,19Z)-15-[[[(2R)-2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-3-sulfo-propanoyl]amino]methyl]-1,4,21,23-tetrahydroporphyrin-5-yl]methylamino]-3-oxidanylidene-propane-1-sulfonic acid, FE (III) ION, IMIDAZOLE, ...
著者Igareta, N.V, Ward, T.R.
登録日2022-04-25
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Streptavidin Iron-Porphyrin
To Be Published
7ZN1
DownloadVisualize
BU of 7zn1 by Molmil
Avidin + Biotin-Tempo
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, ...
著者Milani, J, Lau, K, Pojer, F, Ansermet, J.P, Saenz, F.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Avidin + Biotin-Tempo
To Be Published
7ZYL
DownloadVisualize
BU of 7zyl by Molmil
Avidin + Biotin-Tempo
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, Avidin
著者Milani, J, Myasnikov, A, Beckert, B, Nazarov, S, Ansermet, J.P, Saenz, F.
登録日2022-05-25
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Avidin + Biotin-Tempo
To Be Published
8AQX
DownloadVisualize
BU of 8aqx by Molmil
streptavidin mutant S112I with an iridium catalyst for CH activation
分子名称: Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-08-14
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
8AQD
DownloadVisualize
BU of 8aqd by Molmil
Hydrophobic probe bound to Streptavidin - 1
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(dimethylamino)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-08-12
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Hydrophobic probe bound to Streptavidin - 1
To Be Published
8AQJ
DownloadVisualize
BU of 8aqj by Molmil
Hydrophobic probe bound to Streptavidin - 2
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(dimethylamino)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-08-12
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Hydrophobic probe bound to Streptavidin - 2
To Be Published
1HQQ
DownloadVisualize
BU of 1hqq by Molmil
MINIPROTEIN MP-2 (M9A) COMPLEX WITH STREPTAVIDIN
分子名称: MP-2, STREPTAVIDIN
著者Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
登録日2000-12-19
公開日2003-09-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-protein Complexes
To be Published
8AQO
DownloadVisualize
BU of 8aqo by Molmil
Streptavidin with a bisbiothinilated Fe4S4 cluster
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[[20-[2-[5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethanoylamino]-2$l^{3},4,12,14$l^{3},16,24,25$l^{3},27$l^{3}-octathia-1$l^{4},3$l^{4},13$l^{4},15$l^{4}-tetraferranonacyclo[11.11.1.1^{1,13}.1^{6,10}.1^{18,22}.0^{2,15}.0^{3,14}.0^{3,25}.0^{15,27}]octacosa-6(28),7,9,18,20,22(26)-hexaen-8-yl]amino]-2-oxidanylidene-ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-08-13
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Hydrophobic probe bound to Streptavidin - 1
To Be Published
1KL4
DownloadVisualize
BU of 1kl4 by Molmil
AN ENGINEERED STREPTAVIDIN WITH IMPROVED AFFINITY FOR THE STREP-TAG II PEPTIDE : apo-SAM2
分子名称: streptavidin
著者Korndoerfer, I.P, Skerra, A.
登録日2001-12-11
公開日2002-04-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon