4ENB
 
 | | Crystal structure of fluoride riboswitch, bound to Iridium | | 分子名称: | FLUORIDE ION, Fluoride riboswitch, IRIDIUM HEXAMMINE ION, ... | | 著者 | Ren, A.M, Rajashankar, K.R, Patel, D.J. | | 登録日 | 2012-04-12 | | 公開日 | 2012-05-09 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (2.302 Å) | | 主引用文献 | Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
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2EEW
 | | Guanine Riboswitch U47C mutant bound to hypoxanthine | | 分子名称: | ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ... | | 著者 | Gilbert, S.D, Love, C.E, Batey, R.T. | | 登録日 | 2007-02-19 | | 公開日 | 2007-11-13 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | | 主引用文献 | Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
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4ENC
 | | Crystal structure of fluoride riboswitch | | 分子名称: | FLUORIDE ION, Fluoride riboswitch, MAGNESIUM ION, ... | | 著者 | Ren, A.M, Rajashankar, K.R, Patel, D.J. | | 登録日 | 2012-04-12 | | 公開日 | 2012-05-09 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (2.272 Å) | | 主引用文献 | Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
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2EET
 | | Guanine Riboswitch A21G, U75C mutant bound to hypoxanthine | | 分子名称: | ACETATE ION, COBALT HEXAMMINE(III), Guanine Riboswitch, ... | | 著者 | Gilbert, S.D, Edwards, A.L, Batey, R.T. | | 登録日 | 2007-02-18 | | 公開日 | 2007-11-13 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
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2EEU
 | | Guanine riboswitch U22A, A52U mutant bound to hypoxanthine | | 分子名称: | ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ... | | 著者 | Gilbert, S.D, Love, C.E, Batey, R.T. | | 登録日 | 2007-02-19 | | 公開日 | 2007-11-13 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
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6DN3
 | | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA | | 分子名称: | 7,8-dimethyl-2,4-dioxo-10-(3-phenylpropyl)-1,2,3,4-tetrahydrobenzo[g]pteridin-10-ium, CHLORIDE ION, MAGNESIUM ION, ... | | 著者 | Vicens, Q, Mondragon, E, Reyes, F.E, Berman, J, Kaur, H, Kells, K, Wickens, P, Wilson, J, Gadwood, R, Schostarez, H, Suto, R.K, Coish, P, Blount, K.F, Batey, R.T. | | 登録日 | 2018-06-05 | | 公開日 | 2018-09-05 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.
ACS Chem. Biol., 13, 2018
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6DN1
 | | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1151 SPLIT RNA | | 分子名称: | 10-(6-carboxyhexyl)-8-(cyclopentylamino)-2,4-dihydroxy-7-methylbenzo[g]pteridin-10-ium, MAGNESIUM ION, POTASSIUM ION, ... | | 著者 | Vicens, Q, Mondragon, E, Reyes, F.E, Berman, J, Kaur, H, Kells, K, Wickens, P, Wilson, J, Gadwood, R, Schostarez, H, Suto, R.K, Coish, P, Blount, K.F, Batey, R.T. | | 登録日 | 2018-06-05 | | 公開日 | 2018-09-05 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (3.03 Å) | | 主引用文献 | Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.
ACS Chem. Biol., 13, 2018
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3D2X
 | | Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate | | 分子名称: | 3-[(4-hydroxy-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, MAGNESIUM ION, TPP-specific riboswitch | | 著者 | Thore, S, Frick, C, Ban, N. | | 登録日 | 2008-05-09 | | 公開日 | 2008-07-01 | | 最終更新日 | 2023-08-30 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
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3P49
 | | Crystal Structure of a Glycine Riboswitch from Fusobacterium nucleatum | | 分子名称: | GLYCINE, GLYCINE RIBOSWITCH, MAGNESIUM ION, ... | | 著者 | Butler, E.B, Wang, J, Xiong, Y, Strobel, S. | | 登録日 | 2010-10-06 | | 公開日 | 2011-04-06 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (3.55 Å) | | 主引用文献 | Structural basis of cooperative ligand binding by the glycine riboswitch.
Chem.Biol., 18, 2011
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6DN2
 | | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA | | 分子名称: | 4-{benzyl[2-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)ethyl]amino}butanoic acid, MAGNESIUM ION, POTASSIUM ION, ... | | 著者 | Vicens, Q, Mondragon, E, Reyes, F.E, Berman, J, Kaur, H, Kells, K, Wickens, P, Wilson, J, Gadwood, R, Schostarez, H, Suto, R.K, Coish, P, Blount, K.F, Batey, R.T. | | 登録日 | 2018-06-05 | | 公開日 | 2018-09-05 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (2.88 Å) | | 主引用文献 | Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.
ACS Chem. Biol., 13, 2018
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4L81
 | | Structure of the SAM-I/IV riboswitch (env87(deltaU92, deltaG93)) | | 分子名称: | COBALT HEXAMMINE(III), MAGNESIUM ION, S-ADENOSYLMETHIONINE, ... | | 著者 | Trausch, J.J, Reyes, F.E, Edwards, A.L, Batey, R.T. | | 登録日 | 2013-06-15 | | 公開日 | 2014-05-28 | | 最終更新日 | 2023-09-20 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Structural basis for diversity in the SAM clan of riboswitches.
Proc.Natl.Acad.Sci.USA, 111, 2014
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3SD3
 | | The structure of the tetrahydrofolate riboswitch containing a U25C mutation | | 分子名称: | IRIDIUM HEXAMMINE ION, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, Tetrahydrofolate riboswitch | | 著者 | Reyes, F.E, Trausch, J.J, Ceres, P, Batey, R.T. | | 登録日 | 2011-06-08 | | 公開日 | 2011-09-21 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | The structure of a tetrahydrofolate-sensing riboswitch reveals two ligand binding sites in a single aptamer.
Structure, 19, 2011
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4OQU
 | | Structure of the SAM-I/IV riboswitch (env87(deltaU92)) | | 分子名称: | MAGNESIUM ION, S-ADENOSYLMETHIONINE, SAM-I/IV riboswitch | | 著者 | Trausch, J.J, Reyes, F.E, Edwards, A.L, Batey, R.T. | | 登録日 | 2014-02-10 | | 公開日 | 2014-06-04 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Structural basis for diversity in the SAM clan of riboswitches.
Proc.Natl.Acad.Sci.USA, 111, 2014
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3Q3Z
 | | Structure of a c-di-GMP-II riboswitch from C. acetobutylicum bound to c-di-GMP | | 分子名称: | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, c-di-GMP-II riboswitch | | 著者 | Smith, K.D, Shanahan, C.A, Moore, E.L, Simon, A.C, Strobel, S.A. | | 登録日 | 2010-12-22 | | 公開日 | 2011-05-11 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (2.51 Å) | | 主引用文献 | Structural basis of differential ligand recognition by two classes of bis-(3'-5')-cyclic dimeric guanosine monophosphate-binding riboswitches.
Proc.Natl.Acad.Sci.USA, 108, 2011
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3F4E
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3D2V
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3VRS
 | | Crystal structure of fluoride riboswitch, soaked in Mn2+ | | 分子名称: | FLUORIDE ION, Fluoride riboswitch, MANGANESE (II) ION, ... | | 著者 | Ren, A.M, Rajashankar, K.R, Patel, D.J. | | 登録日 | 2012-04-13 | | 公開日 | 2012-05-09 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (2.603 Å) | | 主引用文献 | Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
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3D2G
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3GOG
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3GOT
 | | Guanine riboswitch C74U mutant bound to 2-fluoroadenine. | | 分子名称: | 2-fluoroadenine, ACETATE ION, COBALT HEXAMMINE(III), ... | | 著者 | Gilbert, S.D, Reyes, F.E, Batey, R.T. | | 登録日 | 2009-03-20 | | 公開日 | 2009-06-23 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009
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3F2T
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3FO4
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3E5F
 | | Crystal Structures of the SMK box (SAM-III) Riboswitch with Se-SAM | | 分子名称: | SMK box (SAM-III) Riboswitch for RNA, STRONTIUM ION, [(3S)-3-amino-4-hydroxy-4-oxo-butyl]-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]-methyl-selanium | | 著者 | Lu, C. | | 登録日 | 2008-08-13 | | 公開日 | 2008-10-07 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Crystal structures of the SAM-III/S(MK) riboswitch reveal the SAM-dependent translation inhibition mechanism.
Nat.Struct.Mol.Biol., 15, 2008
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3IWN
 | | Co-crystal structure of a bacterial c-di-GMP riboswitch | | 分子名称: | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), C-di-GMP riboswitch, U1 small nuclear ribonucleoprotein A | | 著者 | Kulshina, N, Baird, N.J, Ferre-D'Amare, A.R. | | 登録日 | 2009-09-02 | | 公開日 | 2009-11-10 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch.
Nat.Struct.Mol.Biol., 16, 2009
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3E5C
 | | Crystal Structure of the SMK box (SAM-III) Riboswitch with SAM | | 分子名称: | S-ADENOSYLMETHIONINE, SMK box (SAM-III) Riboswitch, STRONTIUM ION | | 著者 | Lu, C. | | 登録日 | 2008-08-13 | | 公開日 | 2008-10-07 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | | 主引用文献 | Crystal structures of the SAM-III/S(MK) riboswitch reveal the SAM-dependent translation inhibition mechanism.
Nat.Struct.Mol.Biol., 15, 2008
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