PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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7MEQ	Crystal structure of human TMPRSS2 in complex with Nafamostat 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-carbamimidamidobenzoic acid, Transmembrane protease serine 2, ... 著者 Fraser, B, Beldar, S, Hutchinson, A, Li, Y, Seitova, A, Edwards, A.M, Benard, F, Arrowsmith, C.H, Halabelian, L, Structural Genomics Consortium (SGC) 登録日 2021-04-07 公開日 2021-04-21 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure and activity of human TMPRSS2 protease implicated in SARS-CoV-2 activation. Nat.Chem.Biol., 18, 2022
5JR5	RHCC in Complex with Elemental Sulfur 分子名称: SULFATE ION, Tetrabrachion, octathiocane 著者 McDougall, M, Meier, M, Stetefeld, J. 登録日 2016-05-05 公開日 2017-05-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Archaea S-layer nanotube from a "black smoker" in complex with cyclo-octasulfur (S8 ) rings. Proteins, 85, 2017
5W4N	Crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2(C45S) 分子名称: DIMETHYL SULFOXIDE, GLYCEROL, Transcriptional regulator 著者 Neiditch, M.B, Khataokar, A.A, Capodagli, G.C. 登録日 2017-06-12 公開日 2017-10-25 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.198 Å) 主引用文献 Activating mutations in quorum-sensing regulator Rgg2 and its conformational flexibility in the absence of an intermolecular disulfide bond. J. Biol. Chem., 292, 2017
5VY1	Crystal structure of the extended Tudor domain from BmPAPI 分子名称: Tudor and KH domain-containing protein homolog 著者 Hubbard, P.A, Pan, X, McNally, R, Ohtaki, A, Honda, S, Kirino, Y, Murali, R. 登録日 2017-05-24 公開日 2017-06-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis To Be Published
5JQ0	Crystal structure of human carbonic anhydrase II in complex with Benzoxaborole at pH=8.7 分子名称: 1,1-dihydroxy-1,3-dihydro-2,1-benzoxaborol-1-ium, Carbonic anhydrase 2, ZINC ION 著者 Alterio, V, Esposito, D, Di Fiore, A, De Simone, G. 登録日 2016-05-04 公開日 2016-10-19 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Benzoxaborole as a new chemotype for carbonic anhydrase inhibition. Chem.Commun.(Camb.), 52, 2016
5VQH	Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA 分子名称: N3, N4-DIMETHYLARGININE, Tudor and KH domain-containing protein homolog 著者 Hubbard, P.A, Pan, X, Ohtaki, A, McNally, R, Honda, S, Kirino, Y, Murali, R. 登録日 2017-05-08 公開日 2017-06-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis To Be Published
5JUH	Crystal structure of C-terminal domain (RV) of MpAFP 分子名称: Antifreeze protein, CALCIUM ION 著者 Guo, S. 登録日 2016-05-10 公開日 2017-07-19 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice. Sci Adv, 3, 2017
5VVM	Crystal structure of human CDH23 EC21-23 分子名称: CALCIUM ION, Cadherin-23 著者 Patel, A, Jaiganesh, A, Sotomayor, M. 登録日 2017-05-19 公開日 2018-05-23 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.54 Å) 主引用文献 Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness. Structure, 26, 2018
5WEY	Joint X-ray/neutron structure of Concanavalin A with alpha1-2 D-mannobiose 分子名称: CALCIUM ION, Concanavalin-A, MANGANESE (II) ION, ... 著者 Kovalevsky, A, Gerlits, O.O, Woods, R.J. 登録日 2017-07-11 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 NEUTRON DIFFRACTION (1.8 Å), X-RAY DIFFRACTION 主引用文献 Mannobiose Binding Induces Changes in Hydrogen Bonding and Protonation States of Acidic Residues in Concanavalin A As Revealed by Neutron Crystallography. Biochemistry, 56, 2017
5WP0	Crystal structure of NAD synthetase NadE from Vibrio fischeri 分子名称: NH(3)-dependent NAD(+) synthetase 著者 Stogios, P.J, Evdokimova, E, Grimshaw, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2017-08-03 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of NAD synthetase NadE from Vibrio fischeri To Be Published
7MWA	Crystal structure of 2-octaprenyl-6-methoxyphenol hydroxylase UbiH from Acinetobacter baumannii, apoenzyme 分子名称: 1,2-ETHANEDIOL, 2-polyprenyl-6-methoxyphenol 4-hydroxylase, CHLORIDE ION, ... 著者 Stogios, P.J, Evdokimova, E, Endres, M, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2021-05-16 公開日 2021-05-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 UbiH from Acinetobacter baumannii To Be Published
5XXG	Crystal structure of SmyD3 in complex with covalent inhibitor 2 分子名称: S-ADENOSYLMETHIONINE, SMYD3, ZINC ION, ... 著者 Baburajendran, N, Jansson, E.A. 登録日 2017-07-03 公開日 2018-08-08 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Crystal structure of SmyD3 in complex with covalent inhibitor 2 To Be Published
5XYH	Crystal Structure of catalytic domain of 1,4-beta-Cellobiosidase (CbsA) from Xanthomonas oryzae pv. oryzae 分子名称: CbsA 著者 Kumar, S, Haque, A.S, Nathawat, R, Sankaranaryanan, R. 登録日 2017-07-07 公開日 2018-05-16 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.864 Å) 主引用文献 A mutation in an exoglucanase of Xanthomonas oryzae pv. oryzae, which confers an endo mode of activity, affects bacterial virulence, but not the induction of immune responses, in rice Mol. Plant Pathol., 19, 2018
5XYO	Structure of 6-aminohexanoate-oligomer hydrolase from Arthrobacter sp. KI72., D122G mutant 分子名称: CHLORIDE ION, Endo-type 6-aminohexanoate oligomer hydrolase, GLYCEROL, ... 著者 Negoro, S, Shibata, N, Nagai, K, Higuchi, Y. 登録日 2017-07-10 公開日 2018-11-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase Sci Rep, 8, 2018
5Y1T	Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-2-(3-(2,3-dimethylbenzyl)ureido)-N-hydroxy-4-methylpentanamide 分子名称: (2S)-2-[(2,3-dimethylphenyl)methylcarbamoylamino]-4-methyl-N-oxidanyl-pentanamide, GLYCEROL, M1 family aminopeptidase, ... 著者 Marapaka, A.K, Zhang, Y, Addlagatta, A. 登録日 2017-07-21 公開日 2018-08-01 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Development of peptidomimetic hydroxamates as PfA-M1 and PfA-M17 dual inhibitors: Biological evaluation and structural characterization by cocrystallization Chin.Chem.Lett., 33, 2022
1Y7A	Structure of D153H/K328W E. coli alkaline phosphatase in presence of cobalt at 1.77 A resolution 分子名称: Alkaline phosphatase, COBALT (II) ION, PHOSPHATE ION, ... 著者 Wang, J, Stieglitz, K, Kantrowitz, E.R. 登録日 2004-12-08 公開日 2005-06-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Metal Specificity Is Correlated with Two Crucial Active Site Residues in Escherichia coli Alkaline Phosphatase(,). Biochemistry, 44, 2005
5XYT	Structure of 6-aminohexanoate-oligomer hydrolase from Arthrobacter sp. KI72., H130Y mutant 分子名称: Endo-type 6-aminohexanoate oligomer hydrolase, GLYCEROL, SULFATE ION 著者 Negoro, S, Shibata, N, Nagai, K, Higuchi, Y. 登録日 2017-07-10 公開日 2018-11-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase Sci Rep, 8, 2018
5Y6H	Crystal structure of YcgR-N domain of YcgR from Escherichia coli 分子名称: Flagellar brake protein YcgR 著者 Hou, Y.J, Yang, W.S, Wang, D.C, Li, D.F. 登録日 2017-08-11 公開日 2018-07-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.774 Å) 主引用文献 Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility inEscherichia coli. J.Biol.Chem., 295, 2020
1ZUM	Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, ALDH2*2, Apo Form 分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, GUANIDINE, ... 著者 Larson, H.N, Weiner, H, Hurley, T.D. 登録日 2005-05-31 公開日 2005-06-28 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Disruption of the coenzyme binding site and dimer interface revealed in the crystal structure of mitochondrial aldehyde dehydrogenase "asian" variant J.Biol.Chem., 280, 2005
5ZI7	Crystal structure of Legionella pneumophila aminopeptidase A in complex with glutamic acid 分子名称: Aminopeptidase N, GLUTAMIC ACID 著者 Marapaka, A.K, Addlagatta, A. 登録日 2018-03-14 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Discovery, Structural and Biochemical Studies of a rare Glu/Asp Specific M1 Class Aminopeptidase from Legionella pneumophila Int. J. Biol. Macromol., 120, 2018
7DEL	Crystal structure of P.aeruginosa LpxC in complex with inhibitor 分子名称: 3-[4-[2-[3-[[2-[(1~{S})-1-oxidanylethyl]imidazol-1-yl]methyl]-1,2-oxazol-5-yl]ethynyl]phenyl]propan-1-ol, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION 著者 Mima, M, Ushiyama, F, Tanaka-Yamamoto, N. 登録日 2020-11-04 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Lead optimization of 2-hydroxymethyl imidazoles as non-hydroxamate LpxC inhibitors: Discovery of TP0586532. Bioorg.Med.Chem., 30, 2020
7DEM	Crystal structure of P.aeruginosa LpxC in complex with inhibitor 分子名称: 5-[4-[3-[[2-[(1~{S})-1-oxidanylethyl]imidazol-1-yl]methyl]-1,2-oxazol-5-yl]phenyl]pent-4-yn-1-ol, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION 著者 Mima, M, Ushiyama, F, Matsuda, Y. 登録日 2020-11-04 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Lead optimization of 2-hydroxymethyl imidazoles as non-hydroxamate LpxC inhibitors: Discovery of TP0586532. Bioorg.Med.Chem., 30, 2020
5YXF	Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105L mutant) in complex with Methionine 分子名称: COBALT (II) ION, METHIONINE, Methionine aminopeptidase, ... 著者 Sandeep, C.B, Addlagatta, A. 登録日 2017-12-05 公開日 2018-12-12 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105L mutant) in complex with Methionine To Be Published
1ZNS	Crystal structure of N-ColE7/12-bp DNA/Zn complex 分子名称: 5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3', Colicin E7, ZINC ION 著者 Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S. 登録日 2005-05-12 公開日 2006-03-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+ Protein Sci., 15, 2006
7D83	Crystal structure of HIV-1 integrase catalytic core domain in complex with 2-(tert-butoxy)-2-(2-(3-cyclohexylureido)-3,6-dimethyl-5-(5-methylchroman-6-yl)pyridin-4-yl)acetic acid 分子名称: (2S)-2-[2-(cyclohexylcarbamoylamino)-3,6-dimethyl-5-(5-methyl-3,4-dihydro-2H-chromen-6-yl)pyridin-4-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, Integrase, SULFATE ION 著者 Sugiyama, S, Sekiguchi, Y. 登録日 2020-10-07 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Discovery of novel HIV-1 integrase-LEDGF/p75 allosteric inhibitors based on a pyridine scaffold forming an intramolecular hydrogen bond. Bioorg.Med.Chem.Lett., 33, 2020

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