Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8HAT
DownloadVisualize
BU of 8hat by Molmil
NARROW LEAF 1-open from Japonica
分子名称: Protein NARROW LEAF 1
著者Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M.
登録日2022-10-26
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献NARROW LEAF 1-open from Japonica
To Be Published
5XUY
DownloadVisualize
BU of 5xuy by Molmil
Crystal structure of ATG101-ATG13HORMA
分子名称: Autophagy-related protein 101, Autophagy-related protein 13
著者Kim, B.-W, Song, H.K.
登録日2017-06-26
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation.
Autophagy, 14, 2018
3KCS
DownloadVisualize
BU of 3kcs by Molmil
Crystal structure of PAmCherry1 in the dark state
分子名称: PAmCherry1 protein
著者Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
登録日2009-10-21
公開日2009-11-17
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
3KCT
DownloadVisualize
BU of 3kct by Molmil
CRYSTAL STRUCTURE OF PAmCherry1 in the photoactivated state
分子名称: PAmCherry1 protein
著者Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
登録日2009-10-21
公開日2009-11-17
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FZA
DownloadVisualize
BU of 3fza by Molmil
Crystal structure of poplar glutaredoxin S12 in complex with glutathione and beta-mercaptoethanol
分子名称: BETA-MERCAPTOETHANOL, GLUTATHIONE, Glutaredoxin
著者Didierjean, C, Corbier, C, Koh, C.S, Rouhier, N, Jacquot, J.P.
登録日2009-01-24
公開日2009-02-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site.
J.Biol.Chem., 284, 2009
3FZ9
DownloadVisualize
BU of 3fz9 by Molmil
Crystal structure of poplar glutaredoxin S12 in complex with glutathione
分子名称: GLUTATHIONE, Glutaredoxin
著者Didierjean, C, Corbier, C, Koh, C.S, Rouhier, N, Jacquot, J.P.
登録日2009-01-24
公開日2009-02-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site.
J.Biol.Chem., 284, 2009
3JBM
DownloadVisualize
BU of 3jbm by Molmil
Electron cryo-microscopy of a virus-like particle of orange-spotted grouper nervous necrosis virus
分子名称: virus-like particle of orange-spotted grouper nervous necrosis virus
著者Xie, J, Li, K, Gao, Y, Huang, R, Lai, Y, Shi, Y, Yang, S, Zhu, G, Zhang, Q, He, J.
登録日2015-09-06
公開日2016-10-19
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural analysis and insertion study reveal the ideal sites for surface displaying foreign peptides on a betanodavirus-like particle
Vet. Res., 47, 2016
3IR8
DownloadVisualize
BU of 3ir8 by Molmil
Red fluorescent protein mKeima at pH 7.0
分子名称: Large stokes shift fluorescent protein
著者Henderson, J.N, Osborn, M.F, Koon, N, Gepshtein, R, Huppert, D, Remington, S.J.
登録日2009-08-21
公開日2009-09-08
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Excited state proton transfer in the red fluorescent protein mKeima.
J.Am.Chem.Soc., 131, 2009
5K4Z
DownloadVisualize
BU of 5k4z by Molmil
M. thermoresistible IMPDH in complex with IMP and Compound 6
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase, ~{N}-(4-fluorophenyl)-4-(2~{H}-indazol-6-ylsulfamoyl)-3,5-dimethyl-1~{H}-pyrrole-2-carboxamide
著者Pacitto, A, Ascher, D.B, Blundell, T.L.
登録日2016-05-22
公開日2016-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Essential but Not Vulnerable: Indazole Sulfonamides Targeting Inosine Monophosphate Dehydrogenase as Potential Leads against Mycobacterium tuberculosis.
ACS Infect Dis, 3, 2017
5K4X
DownloadVisualize
BU of 5k4x by Molmil
M. thermoresistible IMPDH in complex with IMP and Compound 1
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase, ~{N}-(2~{H}-indazol-6-yl)-3,5-dimethyl-1~{H}-pyrazole-4-sulfonamide
著者Pacitto, A, Ascher, D.B, Blundell, T.L.
登録日2016-05-22
公開日2016-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Essential but Not Vulnerable: Indazole Sulfonamides Targeting Inosine Monophosphate Dehydrogenase as Potential Leads against Mycobacterium tuberculosis.
ACS Infect Dis, 3, 2017
5LTQ
DownloadVisualize
BU of 5ltq by Molmil
Structure of the Yellow Fluorescent Protein lanYFP from Branchiostoma lanceolatum at pH 7.5
分子名称: CHLORIDE ION, Green fluorescent protein blFP-Y3
著者Clavel, D, Gotthard, G, Royant, A.
登録日2016-09-07
公開日2016-12-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
5LTR
DownloadVisualize
BU of 5ltr by Molmil
Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the near physiological pH 8.0
分子名称: CHLORIDE ION, mNeonGreen
著者Clavel, D, Gotthard, G, Royant, A.
登録日2016-09-07
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
5LU3
DownloadVisualize
BU of 5lu3 by Molmil
The Structure of Spirochaeta thermophila CBM64
分子名称: 3,6,9,12,15-pentaoxaoctadecan-17-amine, 4-oxobutanoic acid, CALCIUM ION, ...
著者Correia, M.A.S, Romao, M.J, Carvalho, A.L.
登録日2016-09-07
公開日2017-02-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Stability and Ligand Promiscuity of Type A Carbohydrate-binding Modules Are Illustrated by the Structure of Spirochaeta thermophila StCBM64C.
J. Biol. Chem., 292, 2017
5LTP
DownloadVisualize
BU of 5ltp by Molmil
Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the acidic pH 4.5
分子名称: CHLORIDE ION, CITRATE ANION, mNeonGreen
著者Clavel, D, Gotthard, G, Royant, A.
登録日2016-09-07
公開日2016-12-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
2VMA
DownloadVisualize
BU of 2vma by Molmil
The three-dimensional structure of the cytoplasmic domains of EpsF from the Type 2 Secretion System of Vibrio cholerae
分子名称: CALCIUM ION, GENERAL SECRETION PATHWAY PROTEIN F, IODIDE ION
著者Abendroth, J, Korotkov, K.V, Mitchell, D.D, Kreger, A, Hol, W.G.J.
登録日2008-01-25
公開日2009-02-10
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Three-Dimensional Structure of the Cytoplasmic Domains of Epsf from the Type 2 Secretion System of Vibrio Cholerae.
J.Struct.Biol., 166, 2009
2XVY
DownloadVisualize
BU of 2xvy by Molmil
Cobalt chelatase CbiK (periplasmic) from Desulvobrio vulgaris Hildenborough (co-crystallised with cobalt and SHC)
分子名称: CHELATASE, PUTATIVE, COBALT (II) ION, ...
著者Romao, C.V, Lobo, S.A.L, Carrondo, M.A, Saraiva, L.M, Matias, P.M.
登録日2010-10-28
公開日2011-11-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Desulfovibrio vulgaris CbiK(P) cobaltochelatase: evolution of a haem binding protein orchestrated by the incorporation of two histidine residues.
Environ. Microbiol., 19, 2017
2W9Y
DownloadVisualize
BU of 2w9y by Molmil
The structure of the lipid binding protein Ce-FAR-7 from Caenorhabditis elegans
分子名称: FATTY ACID/RETINOL BINDING PROTEIN PROTEIN 7, ISOFORM A, CONFIRMED BY TRANSCRIPT EVIDENCE, ...
著者Jordanova, R, Groves, M.R, Tucker, P.A.
登録日2009-01-30
公開日2009-10-20
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fatty Acid and Retinoid Binding Proteins Have Distinct Binding Pockets for the Two Types of Cargo
J.Biol.Chem., 284, 2009
1G7K
DownloadVisualize
BU of 1g7k by Molmil
CRYSTAL STRUCTURE OF DSRED, A RED FLUORESCENT PROTEIN FROM DISCOSOMA SP. RED
分子名称: FLUORESCENT PROTEIN FP583
著者Yarbrough, D, Wachter, R.M, Kallio, K, Matz, M.V, Remington, S.J.
登録日2000-11-10
公開日2000-12-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-A resolution.
Proc.Natl.Acad.Sci.USA, 98, 2001
8PMI
DownloadVisualize
BU of 8pmi by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458 in presence of peptide from FZP protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AMMONIUM ION, MAGNESIUM ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMG
DownloadVisualize
BU of 8pmg by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PML
DownloadVisualize
BU of 8pml by Molmil
Structure of Nal1 protein , SPIKE allele from japonica rice, construct 46-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2025-02-05
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
3QAY
DownloadVisualize
BU of 3qay by Molmil
Catalytic domain of CD27L endolysin targeting Clostridia Difficile
分子名称: Endolysin, PHOSPHATE ION, ZINC ION
著者Mayer, M.J, Garefaliki, V, Spoerl, R, Narbad, A, Meijers, R.
登録日2011-01-12
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based modification of a Clostridium difficile-targeting endolysin affects activity and host range.
J.Bacteriol., 193, 2011
5Z6Y
DownloadVisualize
BU of 5z6y by Molmil
Structure of sfYFP48S95C66BPA
分子名称: Green fluorescent protein
著者Wang, J.Y, Wang, J.Y.
登録日2018-01-25
公開日2019-06-12
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献structure of sfYFP48S95C66BPA at 1.95 Angstroms resolution
To Be Published
8PN2
DownloadVisualize
BU of 8pn2 by Molmil
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMM
DownloadVisualize
BU of 8pmm by Molmil
Structure of Nal1 protein, allele SPIKE from japonica rice, construct 31-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon