PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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8KCN	X-ray structure of 3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase mutant 分子名称: NADP-dependent (R)-specific alcohol dehydrogenase 著者 Song, S.K, Ma, Q.Q, Lv, D.Q, Cheng, C.Y, Su, Z.D. 登録日 2023-08-08 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 X-ray structure of 3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase mutant to be published
4DT8	Crystal Structure of Aminoglycoside-2''-Phosphotransferase Type IVa in Complex with Adenosine 分子名称: ADENOSINE, APH(2'')-Id, CHLORIDE ION 著者 Shi, K, Berghuis, A.M. 登録日 2012-02-20 公開日 2012-03-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural Basis for Dual Nucleotide Selectivity of Aminoglycoside 2''-Phosphotransferase IVa Provides Insight on Determinants of Nucleotide Specificity of Aminoglycoside Kinases. J.Biol.Chem., 287, 2012
1MOO	Site Specific Mutant (H64A) of Human Carbonic Anhydrase II at high resolution 分子名称: 4-METHYLIMIDAZOLE, Carbonic Anhydrase II, MERCURY (II) ION, ... 著者 Duda, D.M, Govindasamy, L, Agbandje-McKenna, M, Tu, C.K, Silverman, D.N, McKenna, R. 登録日 2002-09-09 公開日 2002-09-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 The refined atomic structure of carbonic anhydrase II at 1.05 A resolution: implications of chemical rescue of proton transfer. Acta Crystallogr.,Sect.D, 59, 2003
1MJ4	Crystal Structure Analysis of the cytochrome b5 domain of human sulfite oxidase 分子名称: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... 著者 Rudolph, M.J, Johnson, J.L, Rajagopalan, K.V, Kisker, C. 登録日 2002-08-26 公開日 2002-09-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 The 1.2 A structure of the human sulfite oxidase cytochrome b(5) domain. Acta Crystallogr.,Sect.D, 59, 2003
8K75	N-terminal domain of FIPV nucleocapsid protein 分子名称: Nucleoprotein 著者 Zhang, J.T, Liang, R, Shi, Y.J, Peng, G.Q. 登録日 2023-07-26 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 N-terminal domain of FIPV nucleocapsid protein To Be Published
8STY	Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI60 分子名称: 3C-like proteinase nsp5, benzyl (3S)-3-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-2-azaspiro[4.4]nonane-2-carboxylate 著者 Blankenship, L.B, Liu, W.R. 登録日 2023-05-11 公開日 2023-08-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A Systematic Survey of Reversibly Covalent Dipeptidyl Inhibitors of the SARS-CoV-2 Main Protease. J.Med.Chem., 66, 2023
8K5S	The structure of EntE with 3-(prop-2-yn-1-yloxy)benzoic acid sulfamoyl adenosine 分子名称: Enterobactin synthase component E, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-(3-prop-2-ynoxyphenyl)carbonylsulfamate 著者 Miyanaga, A, Ishikawa, F. 登録日 2023-07-24 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Reprogrammed aryl acid adenylation domain with an enlarged substrate binding pocket To be published
8K5T	The structure of EntE with2-methyl-3-chloro-benzoic acid sulfamoyl adenosine 分子名称: Enterobactin synthase component E, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-(3-chloranyl-2-methyl-phenyl)carbonylsulfamate 著者 Miyanaga, A, Ishikawa, F. 登録日 2023-07-24 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Reprogrammed aryl acid adenylation domain with an enlarged substrate binding pocket To be published
8KAR	Glutamate dehydrogenase-AKG 分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, Glutamate dehydrogenase, ... 著者 Sakuraba, H, Ohshima, T. 登録日 2023-08-03 公開日 2024-08-07 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Structure of glutamate dehydrogenase-AKG To be published
8SSY	Room-temperature X-ray structure of Thermus thermophilus serine hydroxymethyltransferase (SHMT) bound with D-Ser in a pseudo-Michaelis complex 分子名称: D-SERINE, SULFATE ION, Serine hydroxymethyltransferase 著者 Drago, V.N, Kovalevsky, A. 登録日 2023-05-09 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Revealing protonation states and tracking substrate in serine hydroxymethyltransferase with room-temperature X-ray and neutron crystallography. Commun Chem, 6, 2023
8EYM	CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM SHEWANELLA DENITRIFICANS OS217 IN COMPLEX WITH GLUCITOLAMINE-6-PHOSPHATE AND N-ACETYLGLUCOSAMINE-6-PHOSPHATE AT 2.31 A RESOLUTION 分子名称: 2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLUCOSAMINE-6-PHOSPHATE DEAMINASE 著者 Rodriguez-Hernandez, A, Marcos-Viquez, J, Rodriguez-Romero, A, Bustos-Jaimes, I. 登録日 2022-10-27 公開日 2023-05-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.311 Å) 主引用文献 Substrate binding in the allosteric site mimics homotropic cooperativity in the SIS-fold glucosamine-6-phosphate deaminases. Protein Sci., 32, 2023
8KB7	Crystal structure of UDP/mannose-bound AGO61/beta-1,4-N-Acetylglucosaminyltransferase 2 (POMGNT2) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2, ... 著者 Satoh, T, Umezawa, F, Yagi, H, Kato, K. 登録日 2023-08-04 公開日 2024-08-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of UDP/mannose-bound AGO61/beta-1,4-N-Acetylglucosaminyltransferase 2 (POMGNT2) To Be Published
8STZ	Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI37 分子名称: 3C-like proteinase nsp5, benzyl (3S)-3-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-2-azaspiro[4.5]decane-2-carboxylate 著者 Blankenship, L.B, Liu, W.R. 登録日 2023-05-11 公開日 2023-08-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A Systematic Survey of Reversibly Covalent Dipeptidyl Inhibitors of the SARS-CoV-2 Main Protease. J.Med.Chem., 66, 2023
8SDC	Crystal structure of fluoroacetate dehalogenase Daro3835 apoenzyme 分子名称: Alpha/beta hydrolase fold protein, CHLORIDE ION 著者 Stogios, P.J, Skarina, T, Khusnutdinova, A, Iakounine, A, Savchenko, A. 登録日 2023-04-06 公開日 2023-09-06 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural insights into hydrolytic defluorination of difluoroacetate by microbial fluoroacetate dehalogenases. Febs J., 290, 2023
8EOL	CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM SHEWANELLA DENITRIFICANS OS217 AT 2.17 A RESOLUTION 分子名称: GLUCOSAMINE-6-PHOSPHATE DEAMINASE 著者 Rodriguez-Hernandez, A, Marcos-Viquez, J, Rodriguez-Romero, A, Bustos-Jaimes, I. 登録日 2022-10-03 公開日 2023-05-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Substrate binding in the allosteric site mimics homotropic cooperativity in the SIS-fold glucosamine-6-phosphate deaminases. Protein Sci., 32, 2023
1M45	CRYSTAL STRUCTURE OF MLC1P BOUND TO IQ2 OF MYO2P, A CLASS V MYOSIN 分子名称: IQ2 Motif from MYO2P, A Class V Myosin, Myosin light chain 著者 Terrak, M, Dominguez, R. 登録日 2002-07-02 公開日 2003-02-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Two distinct myosin light chain structures are induced by specific variations within the bound IQ motifs-functional implications Embo J., 22, 2003
8KDU	Crystal structure of trypsin with its substrate 分子名称: (2~{R})-2-benzamido-5-carbamimidamido-pentanoic acid, ARGININE, CALCIUM ION, ... 著者 Akbar, Z, Ahmad, M.S. 登録日 2023-08-10 公開日 2024-08-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of trypsin with its substrate To Be Published
1M48	Crystal Structure of Human IL-2 Complexed with (R)-N-[2-[1-(Aminoiminomethyl)-3-piperidinyl]-1-oxoethyl]-4-(phenylethynyl)-L-phenylalanine methyl ester 分子名称: 2-[3-METHYL-4-(N-METHYL-GUANIDINO)-BUTYRYLAMINO]-3-(4-PHENYLETHYNYL-PHENYL)-PROPIONIC ACID METHYL ESTER, interleukin-2 著者 Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, McDowell, R.S, Wells, J.A, Braisted, A.C. 登録日 2002-07-02 公開日 2002-07-31 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Binding of small molecules to an adaptive protein-protein interface Proc.Natl.Acad.Sci.USA, 100, 2003
8KAO	Glutamate dehydrogenase-69O 分子名称: 2-oxopentanoic acid, Glutamate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Sakuraba, H, Ohshima, T. 登録日 2023-08-03 公開日 2024-08-07 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structure of glutamate dehydrogenase-69O To be published
1M67	Crystal Structure of Leishmania mexicana GPDH Complexed with Inhibitor 2-bromo-6-hydroxy-purine 分子名称: 2-BROMO-6-HYDROXY-PURINE, Glycerol-3-phosphate dehydrogenase, PALMITIC ACID 著者 Choe, J, Suresh, S, Wisedchaisri, G, Kennedy, K.J, Gelb, M.H, Hol, W.G.J. 登録日 2002-07-12 公開日 2002-12-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Anomalous differences of light elements in determining precise binding modes of ligands to glycerol-3-phosphate dehydrogenase Chem.Biol., 9, 2002
1M6G	Structural Characterisation of the Holliday Junction TCGGTACCGA 分子名称: 5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3', STRONTIUM ION 著者 Thorpe, J.H, Gale, B.C, Teixeira, S.C.M, Cardin, C.J. 登録日 2002-07-16 公開日 2003-05-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.652 Å) 主引用文献 Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA)(4) J.Mol.Biol., 327, 2003
1M7U	Crystal structure of a novel DNA-binding domain from Ndt80, a transcriptional activator required for meiosis in yeast 分子名称: Ndt80 protein 著者 Montano, S.P, Cote, M.L, Fingerman, I, Pierce, M, Vershon, A.K, Georgiadis, M.M. 登録日 2002-07-22 公開日 2002-11-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the DNA-binding domain from Ndt80, a transcriptional activator required for meiosis in yeast Proc.Natl.Acad.Sci.USA, 99, 2002
4L0A	X-ray structure of an all LNA quadruplex 分子名称: DNA/RNA (5'-R(*(TLN)P*(LCG)P*(LCG)P*(LCG)P*(TLN))-3'), GLYCEROL, POTASSIUM ION 著者 Russo Krauss, I, Parkinson, G, Merlino, A, Mazzarella, L, Sica, F. 登録日 2013-05-31 公開日 2014-03-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A regular thymine tetrad and a peculiar supramolecular assembly in the first crystal structure of an all-LNA G-quadruplex. Acta Crystallogr.,Sect.D, 70, 2014
3E27	Nicotinic acid mononucleotide (NaMN) adenylyltransferase from Bacillus anthracis: product complex 分子名称: MAGNESIUM ION, NICOTINIC ACID ADENINE DINUCLEOTIDE, Nicotinate (Nicotinamide) nucleotide adenylyltransferase 著者 Martynowski, D, Eyobo, Y, Zhang, H. 登録日 2008-08-05 公開日 2008-09-09 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Targeting NAD biosynthesis in bacterial pathogens: Structure-based development of inhibitors of nicotinate mononucleotide adenylyltransferase NadD. Chem.Biol., 16, 2009
4L2B	X-ray structure of the C57S mutant of the iron superoxide dismutase from Pseudoalteromonas haloplanktis 分子名称: FE (III) ION, Superoxide dismutase [Fe], alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose 著者 Merlino, A, Russo Krauss, I, Sica, F. 登録日 2013-06-04 公開日 2014-02-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural and denaturation studies of two mutants of a cold adapted superoxide dismutase point to the importance of electrostatic interactions in protein stability. Biochim.Biophys.Acta, 1844, 2014

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