PDB: 3712 件ウェブページステータス検索Chemie searchBIRD

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8IBD	Respiratory complex CI:CIII2, type II, Wild type mouse under cold temperature 分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-02-10 公開日 2024-09-18 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8IC2	Respiratory complex CI:CIII2, type I, PERK -/- mouse under cold temperature 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-02-10 公開日 2024-09-18 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8IB4	Respiratory complex CI:CIII2, type IA, Wild type mouse under cold temperature 分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-02-09 公開日 2024-09-18 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8IB9	Respiratory complex CI:CIII2, type IB, Wild type mouse under cold temperature 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-02-10 公開日 2024-09-18 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8IP9	Wheat 40S ribosome in complex with a tRNAi 分子名称: 18S ribosomal RNA, 40S ribosomal protein S23, 40S ribosomal protein eS1, ... 著者 Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T. 登録日 2023-03-14 公開日 2024-02-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1. Nat.Chem.Biol., 20, 2024
8IPB	Wheat 80S ribosome pausing on AUG-Stop with cycloheximide 分子名称: 18S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 40S ribosomal protein eL8, ... 著者 Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T. 登録日 2023-03-14 公開日 2024-02-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1. Nat.Chem.Biol., 20, 2024
8IPA	Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide 分子名称: 18S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 40S ribosomal protein eL8, ... 著者 Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T. 登録日 2023-03-14 公開日 2024-02-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1. Nat.Chem.Biol., 20, 2024
4MTK	Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System 分子名称: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1 著者 Sycheva, L.V, Shneider, M.M, Leiman, P.G. 登録日 2013-09-19 公開日 2014-10-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.322 Å) 主引用文献 The conserved architecture of the T6SS central spike complex To be Published
2WGM	Complete ion-coordination structure in the rotor ring of Na-dependent F-ATP synthase 分子名称: ATP SYNTHASE SUBUNIT C, SODIUM ION SPECIFIC, NONAN-1-OL, ... 著者 Meier, T, Pogoryelov, D, Diederichs, K. 登録日 2009-04-21 公開日 2009-06-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Complete Ion-Coordination Structure in the Rotor Ring of Na(+)-Dependent F-ATP Synthases. J.Mol.Biol., 391, 2009
4NXM	Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8) 分子名称: 16S rRNA, MAGNESIUM ION, ZINC ION, ... 著者 Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G. 登録日 2013-12-09 公開日 2014-05-21 最終更新日 2025-02-19 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 A structural basis for streptomycin resistance To be Published
2UXC	Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit. 分子名称: 16S RIBOSOMAL RNA, A-SITE MESSENGER RNA FRAGMENT CGGG, ANTICODON STEM-LOOP OF TRANSFER RNA WITH ANTICODON ACGA, ... 著者 Dunham, C.M, Selmer, M, Phelps, S.S, Kelley, A.C, Suzuki, T, Joseph, S, Ramakrishnan, V. 登録日 2007-03-28 公開日 2007-05-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structures of Trnas with an Expanded Anticodon Loop in the Decoding Center of the 30S Ribosomal Subunit. RNA, 13, 2007
4NZF	Crystal structure of Abp-D197A (a GH27-b-L-arabinopyranosidase from Geobacillus stearothermophilus), in complex with arabinose 分子名称: Abp, a GH27 beta-L-arabinopyranosidase, CITRIC ACID, ... 著者 Lansky, S, Solomon, H.V, Salama, R, Belrhali, H, Shoham, Y, Shoham, G. 登録日 2013-12-12 公開日 2014-12-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Structure-specificity relationships in Abp, a GH27 beta-L-arabinopyranosidase from Geobacillus stearothermophilus T6 Acta Crystallogr.,Sect.D, 70, 2014
4NWR	Computationally Designed Two-Component Self-Assembling Tetrahedral Cage T33-28 分子名称: Macrophage migration inhibitory factor-like protein, integron gene cassette protein 著者 McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O. 登録日 2013-12-06 公開日 2014-05-28 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Accurate design of co-assembling multi-component protein nanomaterials. Nature, 510, 2014
2VQF	Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding 分子名称: 16S RRNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Kurata, S, Weixlbaumer, A, Ohtsuki, T, Shimazaki, T, Wada, T, Kirino, Y, Takai, K, Watanabe, K, Ramakrishnan, V, Suzuki, T. 登録日 2008-03-14 公開日 2008-04-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding. J.Biol.Chem., 283, 2008
2VQE	Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding 分子名称: 16S RRNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Kurata, S, Weixlbaumer, A, Ohtsuki, T, Shimazaki, T, Wada, T, Kirino, Y, Takai, K, Watanabe, K, Ramakrishnan, V, Suzuki, T. 登録日 2008-03-13 公開日 2008-04-29 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding. J.Biol.Chem., 283, 2008
2WSC	Improved Model of Plant Photosystem I 分子名称: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ... 著者 Amunts, A, Toporik, H, Borovikov, A, Nelson, N. 登録日 2009-09-04 公開日 2009-11-17 最終更新日 2025-04-09 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structure Determination and Improved Model of Plant Photosystem I. J.Biol.Chem., 285, 2010
4NXK	Crystal structure of Abp-D197A, a catalytic mutant of a GH27-b-L-arabinopyranosidase from Geobacillus stearothermophilus 分子名称: Abp, a GH27 beta-L-arabinopyranosidase, CITRIC ACID, ... 著者 Lansky, S, Solomon, H.V, Salama, R, Belrhali, H, Shoham, Y, Shoham, G. 登録日 2013-12-09 公開日 2014-12-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-specificity relationships in Abp, a GH27 beta-L-arabinopyranosidase from Geobacillus stearothermophilus T6 Acta Crystallogr.,Sect.D, 70, 2014
4NXN	Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8), bound with streptomycin 分子名称: 16S rRNA, MAGNESIUM ION, STREPTOMYCIN, ... 著者 Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G. 登録日 2013-12-09 公開日 2014-05-21 最終更新日 2025-02-19 実験手法 X-RAY DIFFRACTION (3.544 Å) 主引用文献 A structural basis for streptomycin resistance To be Published
2WSE	Improved Model of Plant Photosystem I 分子名称: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ... 著者 Amunts, A, Toporik, H, Borovikov, A, Nelson, N. 登録日 2009-09-05 公開日 2009-11-17 最終更新日 2025-04-09 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Structure determination and improved model of plant photosystem I J. Biol. Chem., 285, 2010
4LSK	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-07-22 公開日 2014-08-06 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (3.48000622 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4LT8	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-07-23 公開日 2014-08-06 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (3.14000177 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
2VXJ	CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL13BGAL14GLC AT 1.9 A RESOLUTION 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PA-I GALACTOPHILIC LECTIN, ... 著者 Blanchard, B, Nurisso, A, Hollville, E, Tetaud, C, Wiels, J, Pokorna, M, Wimmerova, M, Varrot, A, Imberty, A. 登録日 2008-07-04 公開日 2008-09-16 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis of the Preferential Binding for Globo-Series Glycosphingolipids Displayed by Pseudomonas Aeruginosa Lectin I. J.Mol.Biol., 383, 2008
4OQ9	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints 分子名称: Coat protein, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Larson, S.B, Day, J.S, McPherson, A. 登録日 2014-02-07 公開日 2014-09-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Satellite tobacco mosaic virus refined to 1.4 angstrom resolution. Acta Crystallogr.,Sect.D, 70, 2014
4NIA	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints 分子名称: Coat protein, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Larson, S.B, Day, J.S, McPherson, A. 登録日 2013-11-05 公開日 2014-09-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Satellite tobacco mosaic virus refined to 1.4 angstrom resolution. Acta Crystallogr.,Sect.D, 70, 2014
2WQT	Dodecahedral assembly of MhpD 分子名称: 2-KETO-4-PENTENOATE HYDRATASE, PHOSPHATE ION, POTASSIUM ION, ... 著者 Montgomery, M.G, Wood, S.P. 登録日 2009-08-27 公開日 2010-01-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Assembly of a 20Nm Protein Cage by Escherichia Coli 2-Hydroxypentadienoic Acid Hydratase (Mhpd). J.Mol.Biol., 396, 2010

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