PDB: 324 件ウェブページステータス検索Chemie searchBIRD

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3G5W	Crystal structure of Blue Copper Oxidase from Nitrosomonas europaea 分子名称: COPPER (II) ION, CU-O LINKAGE, CU-O-CU LINKAGE, ... 著者 Lawton, T.J, Sayavedra-Soto, L.A, Arp, D.J, Rosenzweig, A.C. 登録日 2009-02-05 公開日 2009-02-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a two-domain multicopper oxidase: implications for the evolution of multicopper blue proteins. J.Biol.Chem., 284, 2009
3GDC	Crystal structure of multicopper oxidase 分子名称: CALCIUM ION, COPPER (II) ION, Multicopper oxidase 著者 MacPherson, I.S, Lee, W.C, Liang, T.I, Murphy, M.E.P. 登録日 2009-02-24 公開日 2010-03-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A trimeric multicopper oxidase provides an evolutionary link to nitrite reductase To be Published
4YSD	Room temperature structure of copper nitrite reductase from Geobacillus thermodenitrificans 分子名称: ACETIC ACID, COPPER (II) ION, Nitrite reductase 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YSQ	Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 8.38 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YST	Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 24.9 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YSP	Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 8.32 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diedrichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YSA	Completely oxidized structure of copper nitrite reductase from Geobacillus thermodenitrificans 分子名称: COPPER (II) ION, Nitrite reductase, SODIUM ION 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YSO	Copper nitrite reductase from Geobacillus thermodenitrificans - 0.064 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YSU	Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 25.0 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4YSR	Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 16.6 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
4ZK8	Copper-containing nitrite reductase from thermophilic bacterium Geobacillus thermodenitrificans (Re-refined) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... 著者 Fukuda, Y, Inoue, T. 登録日 2015-04-30 公開日 2015-05-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Structural insights into the function of a thermostable copper-containing nitrite reductase J.Biochem., 155, 2014
4YSS	Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 16.7 MGy 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... 著者 Fukuda, Y, Tse, K.M, Suzuki, M, Diedrichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. 登録日 2015-03-17 公開日 2016-02-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography J.Biochem., 159, 2016
6I3J	Bilirubin oxidase from Myrothecium verrucaria in complex with ferricyanide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bilirubin oxidase, CHLORIDE ION, ... 著者 Svecova, L, Koval, T, Skalova, T, Kolenko, P, Duskova, J, Ostergaard, L.H, Dohnalek, J. 登録日 2018-11-06 公開日 2019-10-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Trp-His covalent adduct in bilirubin oxidase is crucial for effective bilirubin binding but has a minor role in electron transfer. Sci Rep, 9, 2019
6IQZ	High resolution structure of bilirubin oxidase from Myrothecium verrucaria - wild type 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bilirubin oxidase, COPPER (II) ION, ... 著者 Shibata, N, Akter, M, Higuchi, Y. 登録日 2018-11-09 公開日 2018-11-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Redox Potential-Dependent Formation of an Unusual His-Trp Bond in Bilirubin Oxidase. Chemistry, 24, 2018
6IQY	High resolution structure of bilirubin oxidase from Myrothecium verrucaria - M467Q mutant, anaerobically prepared 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Bilirubin oxidase, ... 著者 Shibata, N, Akter, M, Higuchi, Y. 登録日 2018-11-09 公開日 2018-11-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Redox Potential-Dependent Formation of an Unusual His-Trp Bond in Bilirubin Oxidase. Chemistry, 24, 2018
6I3K	Bilirubin oxidase from Myrothecium verrucaria, mutant W396A in complex with ferricyanide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bilirubin oxidase, COPPER (II) ION, ... 著者 Koval, T, Svecova, L, Skalova, T, Kolenko, P, Duskova, J, Ostergaard, L.H, Dohnalek, J. 登録日 2018-11-06 公開日 2019-10-02 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Trp-His covalent adduct in bilirubin oxidase is crucial for effective bilirubin binding but has a minor role in electron transfer. Sci Rep, 9, 2019
6K3D	Structure of multicopper oxidase mutant 分子名称: COPPER (II) ION, CU-O-CU LINKAGE, Multicopper oxidase 著者 Sakuraba, H, Ohshida, T, Satomura, T, Yoneda, K, Ohshima, T. 登録日 2019-05-17 公開日 2020-05-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.919 Å) 主引用文献 Activity enhancement of multicopper oxidase from a hyperthermophile via directed evolution, and its application as the element of a high performance biocathode. J.Biotechnol., 325, 2021
6I3L	Bilirubin oxidase from Myrothecium verrucaria, mutant W396F 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bilirubin oxidase, COPPER (II) ION, ... 著者 Koval, T, Svecova, L, Skalova, T, Kolenko, P, Duskova, J, Ostergaard, L.H, Dohnalek, J. 登録日 2018-11-06 公開日 2019-10-02 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Trp-His covalent adduct in bilirubin oxidase is crucial for effective bilirubin binding but has a minor role in electron transfer. Sci Rep, 9, 2019
6IQX	High resolution structure of bilirubin oxidase from Myrothecium verrucaria - M467Q mutant, aerobically prepared 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Bilirubin oxidase, ... 著者 Shibata, N, Akter, M, Higuchi, Y. 登録日 2018-11-09 公開日 2018-11-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.432 Å) 主引用文献 Redox Potential-Dependent Formation of an Unusual His-Trp Bond in Bilirubin Oxidase. Chemistry, 24, 2018
4E9W	Multicopper Oxidase mgLAC (data2) 分子名称: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ... 著者 Komori, H, Miyazaki, K, Higuchi, Y. 登録日 2012-03-21 公開日 2013-03-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 New insights into the catalytic active-site structure of multicopper oxidases. Acta Crystallogr.,Sect.D, 70, 2014
4E9V	Multicopper Oxidase mgLAC (data1) 分子名称: CHLORIDE ION, COPPER (II) ION, HYDROXIDE ION, ... 著者 Komori, H, Miyazaki, K, Higuchi, Y. 登録日 2012-03-21 公開日 2013-03-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 New insights into the catalytic active-site structure of multicopper oxidases. Acta Crystallogr.,Sect.D, 70, 2014
4E9X	Multicopper Oxidase mgLAC (data3) 分子名称: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ... 著者 Komori, H, Miyazaki, K, Higuchi, Y. 登録日 2012-03-21 公開日 2013-03-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 New insights into the catalytic active-site structure of multicopper oxidases. Acta Crystallogr.,Sect.D, 70, 2014
4GYB	Two-domain laccase from streptomyces lividans at 2.4 A resolution AC1709 分子名称: CHLORIDE ION, COPPER (II) ION, Copper oxidase, ... 著者 Gabdulkhakov, A, Tischenko, S, Yurevich, L, Lisov, A, Leontievsky, A. 登録日 2012-09-05 公開日 2013-10-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Two-domain laccase from streptomyces lividans at 2.4 A resolution AC1709 To be Published
4GXF	Role of the biradical intermediate observed during the turnover of SLAC: A two-domain laccase from Streptomyces coelicolor 分子名称: COPPER (II) ION, OXYGEN ATOM, Putative copper oxidase, ... 著者 Nederlof, I, Gupta, A, Canters, G.W. 登録日 2012-09-04 公開日 2012-09-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.734 Å) 主引用文献 Involvement of Tyr108 in the enzyme mechanism of the small laccase from Streptomyces coelicolor J.Am.Chem.Soc., 134, 2012
4GY4	Role of the biradical intermediate observed during the turnover of SLAC: A two-domain laccase from Streptomyces coelicolor 分子名称: COPPER (II) ION, OXYGEN ATOM, Putative copper oxidase, ... 著者 Nederlof, I, Gupta, A, Canters, G.W. 登録日 2012-09-05 公開日 2012-09-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Involvement of Tyr108 in the enzyme mechanism of the small laccase from Streptomyces coelicolor J.Am.Chem.Soc., 134, 2012

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