PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

---

8TFU	Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 1 分子名称: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet 著者 Bell, C.E. 登録日 2023-07-11 公開日 2024-03-13 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.482 Å) 主引用文献 Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein. J.Mol.Biol., 436, 2024
8TGC	Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 4 分子名称: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet 著者 Bell, C.E. 登録日 2023-07-12 公開日 2024-03-13 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.484 Å) 主引用文献 Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein. J.Mol.Biol., 436, 2024
8TG7	Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 2 分子名称: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet 著者 Bell, C.E. 登録日 2023-07-12 公開日 2024-03-13 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.775 Å) 主引用文献 Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein. J.Mol.Biol., 436, 2024
1PH2	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-29 公開日 2003-06-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH3	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGTG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*TP*G)-3', SODIUM ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-29 公開日 2003-06-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH4	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*CP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-29 公開日 2003-06-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH5	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG(3DR)GG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*(3DR)P*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', CHLORIDE ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-29 公開日 2003-06-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
1PH7	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGIGG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*IP*GP*G)-3', CHLORIDE ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-29 公開日 2003-06-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 2003
2R63	STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES 分子名称: REPRESSOR PROTEIN FROM BACTERIOPHAGE 434 著者 Pervushin, K.V, Billeter, M, Siegal, G, Wuthrich, K. 登録日 1996-11-13 公開日 1997-06-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural role of a buried salt bridge in the 434 repressor DNA-binding domain. J.Mol.Biol., 264, 1996
5YK4	Mismatch Repair Protein 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA mismatch repair protein MutS 著者 Nirwal, S, Nair, D.T. 登録日 2017-10-12 公開日 2017-11-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.97 Å) 主引用文献 Mechanism of formation of a toroid around DNA by the mismatch sensor protein. Nucleic Acids Res., 46, 2018
1K8G	Crystal Structure of the N-terminal domain of Oxytricha nova telomere end binding protein alpha subunit both uncomplexed and complexed with telomeric ssDNA 分子名称: 5'-D(TP*TP*GP*GP*GP*G)-3', SULFATE ION, Telomere-Binding Protein alpha Subunit 著者 Classen, S, Ruggles, J.A, Schultz, S.C. 登録日 2001-10-24 公開日 2001-12-20 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of the N-terminal domain of Oxytricha nova telomere end-binding protein alpha subunit both uncomplexed and complexed with telomeric ssDNA. J.Mol.Biol., 314, 2001
1KIX	Dimeric Structure of the O. nova Telomere End Binding Protein Alpha Subunit with Bound ssDNA 分子名称: 5'-D(*T*TP*TP*TP*GP*GP*GP*G)-3', SULFATE ION, Telomere-Binding Protein alpha Subunit 著者 Peersen, O.B, Ruggles, J.A, Schultz, S.C. 登録日 2001-12-03 公開日 2002-02-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Dimeric structure of the Oxytricha nova telomere end-binding protein alpha-subunit bound to ssDNA. Nat.Struct.Biol., 9, 2002
6T9Q	Crystal structure of the second, C-terminal repeat of the DNA-binding domain of human TImeless 分子名称: Protein timeless homolog 著者 Pellegrini, L, Holzer, S. 登録日 2019-10-28 公開日 2020-07-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Timeless couples G-quadruplex detection with processing by DDX11 helicase during DNA replication. Embo J., 39, 2020
3O3G	T. maritima RNase H2 in complex with nucleic acid substrate and calcium ions 分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3'), ... 著者 Rychlik, M.P, Chon, H, Cerritelli, S.M, Klimek, P, Crouch, R.J, Nowotny, M. 登録日 2010-07-24 公開日 2010-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage. Mol.Cell, 40, 2010
1CA5	INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA 分子名称: 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3', CHROMOSOMAL PROTEIN SAC7D 著者 Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J. 登録日 1999-02-23 公開日 2000-02-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs J.Mol.Biol., 303, 2000
2VIH	CRYSTAL STRUCTURE OF THE IS608 TRANSPOSASE IN COMPLEX WITH Left END 26-MER DNA 分子名称: 5'-D(*AP*AP*AP*GP*CP*CP*CP*CP*TP*AP *GP*CP*TP*TP*TP*TP*AP*GP*CP*TP*AP*TP*GP*GP*GP*G)-3', TRANSPOSASE ORFA 著者 Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F. 登録日 2007-12-04 公開日 2008-02-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection. Cell(Cambridge,Mass.), 132, 2008
1CA6	INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA 分子名称: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', CHROMOSOMAL PROTEIN SAC7D 著者 Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J. 登録日 1999-02-23 公開日 2000-02-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs J.Mol.Biol., 303, 2000
1PA6	Crystal structure of the OXYTRICHA nova telomere end-binding protein complexed with noncognate ssDNA GGGGTTTTGAGG 分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*AP*GP*G)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', CHLORIDE ION, ... 著者 Theobald, D.L, Schultz, S.C. 登録日 2003-05-13 公開日 2003-06-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Nucleotide shuffling and ssDNA recognition in Oxytricha nova telomere end-binding protein complexes Embo J., 22, 2003
3G2D	Complex of Mth0212 and a 4 bp dsDNA with 3'-overhang 分子名称: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*G*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-01-31 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
6KHY	The crystal structure of AsfvAP:AG 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (AGCGTCACCGACGAGGC), DNA(AGCGTCACCGACGAGG), ... 著者 Chen, Y.Q, Gan, J.H. 登録日 2019-07-16 公開日 2020-06-03 実験手法 X-RAY DIFFRACTION (3.008 Å) 主引用文献 A unique DNA-binding mode of African swine fever virus AP endonuclease. Cell Discov, 6, 2020
3G4T	Mth0212 (WT) in complex with a 7bp dsDNA 分子名称: 5'-D(*CP*G*TP*AP*CP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', Exodeoxyribonuclease, ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-02-04 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
3G3C	Mth0212 (WT) in complex with a 6bp dsDNA containing a single one nucleotide long 3'-overhang 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*TP*AP*CP*G)-3', ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-02-02 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.04 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
3G38	The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA 分子名称: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*GP*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-02-02 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.04 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
3G00	Mth0212 in complex with a 9bp blunt end dsDNA at 1.7 Angstrom 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-D(*CP*GP*TP*AP*TP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*UP*TP*AP*CP*G)-3', ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-01-27 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
3G0R	Complex of Mth0212 and an 8bp dsDNA with distorted ends 分子名称: 5'-D(*CP*CP*CP*TP*GP*UP*GP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*CP*GP*CP*AP*GP*GP*GP*CP*G)-3', Exodeoxyribonuclease, ... 著者 Lakomek, K, Dickmanns, A, Ficner, R. 登録日 2009-01-28 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010

<286287288289290291292293294295296297298299300301>