PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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6PRV	58nt RNA L11-binding domain from E. coli 23S rRNA 分子名称: 23S rRNA, MAGNESIUM ION, POTASSIUM ION 著者 Conn, G.L, Dunstan, M.S. 登録日 2019-07-11 公開日 2020-01-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 Ribosomal Protein L11 Selectively Stabilizes a Tertiary Structure of the GTPase Center rRNA Domain. J.Mol.Biol., 432, 2020
6YDV	Crystal Structure of the Jmjc Domain of Human JMJD1B in complex with FM001511a from the DSPL fragment library 分子名称: CHLORIDE ION, JMJD1B protein, MANGANESE (II) ION, ... 著者 Snee, M, Nowak, R, Johansson, C, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U. 登録日 2020-03-21 公開日 2020-05-06 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Crystal Structure of the Jmjc Domain of Human JMJD1B in complex with FM001511a from the DSPL fragment library To Be Published
6J5L	Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 10e 分子名称: High affinity nerve growth factor receptor, N-{2-[({3-[6-(piperazin-1-yl)pyridin-3-yl]-1H-indazol-5-yl}amino)methyl]phenyl}methanesulfonamide 著者 Kensuke, A, Kazutaka, I. 登録日 2019-01-11 公開日 2019-07-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The discovery of novel 3-aryl-indazole derivatives as peripherally restricted pan-Trk inhibitors for the treatment of pain. Bioorg.Med.Chem.Lett., 29, 2019
3T28	TMAO-grown trypsin (bovine)-previously unreported tetragonal crystal form 分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ... 著者 Cahn, J, Venkat, M, Saxby, S, Juers, D. 登録日 2011-07-22 公開日 2011-12-28 最終更新日 2018-03-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography. Acta Crystallogr.,Sect.D, 68, 2012
3T2I	Tetragonal thermolysin in the presence of sarcosine 分子名称: CALCIUM ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Cahn, J, Hti Lar Seng, N.S, Juers, D. 登録日 2011-07-22 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography. Acta Crystallogr.,Sect.D, 68, 2012
3T2H	Tetragonal thermolysin in the presence of TMAO 分子名称: CALCIUM ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Cahn, J, Hti Lar Seng, N.S, Juers, D. 登録日 2011-07-22 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography. Acta Crystallogr.,Sect.D, 68, 2012
4IRO	Crystal structure of T-state carbonmonoxy hemoglobin from Trematomus bernacchii at pH 8.4 分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Merlino, A, Balsamo, A, Mazzarella, L, Vergara, A. 登録日 2013-01-15 公開日 2013-02-20 最終更新日 2013-10-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Role of tertiary structures on the Root effect in fish hemoglobins. Biochim.Biophys.Acta, 1834, 2013
5UI4	Structure of NME1 covalently conjugated to imidazole fluorosulfate 分子名称: 4-[4-(3-methoxyphenyl)-1-(prop-2-yn-1-yl)-1H-imidazol-5-yl]phenyl sulfurofluoridate, Nucleoside diphosphate kinase A 著者 Mortenson, D.E, Brighty, G.J, Wilson, I.A, Kelly, J.W. 登録日 2017-01-12 公開日 2018-01-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 "Inverse Drug Discovery" Strategy To Identify Proteins That Are Targeted by Latent Electrophiles As Exemplified by Aryl Fluorosulfates. J. Am. Chem. Soc., 140, 2018
8UB6	Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA H62X, containing 3-methylhistidine at position 62 分子名称: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS 著者 Henderson, J.N, Mills, J.H. 登録日 2023-09-22 公開日 2023-11-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Capturing excited-state structural snapshots of evolutionary green-to-red photochromic fluorescent proteins. Front Chem, 11, 2023
6Z5T	SARS-CoV-2 Macrodomain in complex with ADP-ribose 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Replicase polyprotein 1ab, SODIUM ION 著者 Zorzini, V, Rack, J, Ahel, I. 登録日 2020-05-27 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.571 Å) 主引用文献 Viral macrodomains: a structural and evolutionary assessment of the pharmacological potential. Open Biology, 10, 2020
6YV4	STRUCTURE OF THE WNT DEACYLASE NOTUM IN COMPLEX WITH A PYRROLE-3-CARBOXYLIC ACID FRAGMENT 686 分子名称: 1,2-ETHANEDIOL, 1-cyclopropyl-2,5-dimethyl-pyrrole-3-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Hillier, J, Ruza, R.R, Jones, E.Y. 登録日 2020-04-27 公開日 2020-05-06 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Screening of a Custom-Designed Acid Fragment Library Identifies 1-Phenylpyrroles and 1-Phenylpyrrolidines as Inhibitors of Notum Carboxylesterase Activity. J.Med.Chem., 63, 2020
3T29	TMAO-grown trigonal trypsin (bovine) 分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ... 著者 Cahn, J, Venkat, M, Marshall, H, Juers, D. 登録日 2011-07-22 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography. Acta Crystallogr.,Sect.D, 68, 2012
3T2J	Tetragonal thermolysin in the presence of betaine 分子名称: CALCIUM ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Cahn, J, Hti Lar Seng, N.S, Juers, D. 登録日 2011-07-22 公開日 2011-12-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography. Acta Crystallogr.,Sect.D, 68, 2012
6Z6I	SARS-CoV-2 Macrodomain in complex with ADP-HPD 分子名称: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, ... 著者 Zorzini, V, Rack, J, Ahel, I. 登録日 2020-05-28 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Viral macrodomains: a structural and evolutionary assessment of the pharmacological potential. Open Biology, 10, 2020
4GCX	tRNA-guanine transglycosylase Y106F, C158V, V233G mutant in complex with preQ1 分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Schmidt, I, Tidten-Luksch, N, Heine, A, Reuter, K, Klebe, G. 登録日 2012-07-31 公開日 2012-08-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor. Plos One, 8, 2013
4G93	CRYSTAL STRUCTURE OF THE HUMAN HEPATITIS B VIRUS T = 4 CAPSID, ADYW STRAIN, in COMPLEX WITH THE PHENYLPROPENAMIDE ASSEMBLY ACCELERATOR AT-130 分子名称: Capsid protein, N-[(1E)-1-bromo-1-(2-methoxyphenyl)-3-oxo-3-(piperidin-1-yl)prop-1-en-2-yl]-4-nitrobenzamide 著者 Katen, S.P, Zlotnick, A. 登録日 2012-07-23 公開日 2013-07-24 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Assembly-directed antivirals differentially bind quasiequivalent pockets to modify hepatitis B virus capsid tertiary and quaternary structure. Structure, 21, 2013
6ZE8	Crystal structure of human chitotriosidase-1 (hCHIT) catalytic domain in complex with compound OATD-01 分子名称: 5-(4-((2S,5S)-5-(4-chlorobenzyl)-2-methylmorpholino)piperidin-1-yl)-4H-1,2,4-triazol-3-amine, Chitotriosidase-1, GLYCEROL, ... 著者 Nowotny, M, Bartlomiejczak, A, Napiorkowska-Gromadzka, A. 登録日 2020-06-16 公開日 2020-11-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Discovery of OATD-01 , a First-in-Class Chitinase Inhibitor as Potential New Therapeutics for Idiopathic Pulmonary Fibrosis. J.Med.Chem., 63, 2020
5YUA	Crystal structure of voltage-gated sodium channel NavAb in high-pH condition 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHAPSO, ... 著者 Irie, K, Shimomura, T, Fujiyoshi, Y. 登録日 2017-11-21 公開日 2017-12-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.80085564 Å) 主引用文献 Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb. FEBS Lett., 2017
5YUC	Crystal structure of voltage-gated sodium channel NavAb N49K mutant 分子名称: CALCIUM ION, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ... 著者 Irie, K, Shimomura, T, Fujiyoshi, Y. 登録日 2017-11-21 公開日 2017-12-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.40099168 Å) 主引用文献 Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb. FEBS Lett., 2017
1JQZ	Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form with Amino Terminal His Tag. 分子名称: FORMIC ACID, acidic fibroblast growth factor 著者 Brych, S.R, Blaber, S.I, Logan, T.M, Blaber, M. 登録日 2001-08-09 公開日 2001-12-19 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil. Protein Sci., 10, 2001
3TEG	Bacterial and Eukaryotic Phenylalanyl-tRNA Synthetases Catalyze Misaminoacylation of tRNAPhe with 3,4-Dihydroxy-L-Phenylalanine (L-Dopa) 分子名称: 3,4-DIHYDROXYPHENYLALANINE, Phenylalanyl-tRNA synthetase, mitochondrial 著者 Moor, N, Klipcan, L, Safro, M. 登録日 2011-08-14 公開日 2011-11-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2044 Å) 主引用文献 Bacterial and Eukaryotic Phenylalanyl-tRNA Synthetases Catalyze Misaminoacylation of tRNA(Phe) with 3,4-Dihydroxy-L-Phenylalanine. Chem.Biol., 18, 2011
6QSI	Pseudomonas fluorescens Pf-5 thiamine diphosphate-dependent 4-hydroxybenzoylformate decarboxylase 分子名称: 1,2-ETHANEDIOL, Benzoylformate decarboxylase, SODIUM ION, ... 著者 Wilkinson, R.C, Fulop, V. 登録日 2019-02-20 公開日 2020-01-08 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Characterization of Thiamine Diphosphate-Dependent 4-Hydroxybenzoylformate Decarboxylase Enzymes fromRhodococcus jostiiRHA1 andPseudomonas fluorescensPf-5 Involved in Degradation of Aryl C2Lignin Degradation Fragments. Biochemistry, 58, 2019
3TWM	Crystal structure of Arabidopsis thaliana FPG 分子名称: 5'-D(*AP*GP*CP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*TP*GP*GP*TP*AP*GP*AP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3', Formamidopyrimidine-DNA glycosylase 1 著者 Duclos, S, Aller, P, Wallace, S.S, Doublie, S. 登録日 2011-09-22 公開日 2012-07-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural and biochemical studies of a plant formamidopyrimidine-DNA glycosylase reveal why eukaryotic Fpg glycosylases do not excise 8-oxoguanine. Dna Repair, 11, 2012
5YUB	Crystal structure of voltage-gated sodium channel NavAb E32Q mutant 分子名称: CALCIUM ION, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ... 著者 Irie, K, Shimomura, T, Fujiyoshi, Y. 登録日 2017-11-21 公開日 2017-12-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.40004 Å) 主引用文献 Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb. FEBS Lett., 2017
2UYT	Structure of L-rhamnulose kinase in complex with ADP and beta-L- rhamnulose. 分子名称: 6-deoxy-beta-L-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, RHAMNULOKINASE 著者 Grueninger, D, Schulz, G.E. 登録日 2007-04-13 公開日 2007-06-26 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Substrate Spectrum of L-Rhamnulose Kinase Related to Models Derived from Two Ternary Complex Structures. FEBS Lett., 581, 2007

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