PDB: 223532 件ウェブページステータス検索Chemie searchBIRD

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9IJ6	Crystal structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with Adenosine phosphate at 2.40 A resolution. 分子名称: ADENOSINE MONOPHOSPHATE, Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, ... 著者 Viswanathan, V, Kumari, A, Singh, A, Kumar, A, Sharma, P, Chopra, S, Jeyakanthan, J, Sharma, S, Raje, C.I, Singh, T.P. 登録日 2024-06-21 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with Adenosine phosphate at 2.40 A resolution. To Be Published
7O57	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-157 分子名称: 14-3-3 protein sigma, 3-morpholin-4-yl-4-nitro-benzaldehyde, Transcription factor p65 著者 Wolter, M, Ottmann, C. 登録日 2021-04-08 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
9FX6	Crystal structure of Cryo2RT SARS-CoV-2 main protease at 100K 分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, MAGNESIUM ION, ... 著者 Huang, C.Y, Aumonier, S, Mac Sweeney, A, Olieric, V, Wang, M. 登録日 2024-07-01 公開日 2024-07-31 最終更新日 2024-08-07 実験手法 X-RAY DIFFRACTION (2.227 Å) 主引用文献 Cryo2RT: a high-throughput method for room-temperature macromolecular crystallography from cryocooled crystals. Acta Crystallogr D Struct Biol, 2024
9ILB	HUMAN INTERLEUKIN-1 BETA 分子名称: PROTEIN (HUMAN INTERLEUKIN-1 BETA) 著者 Yu, B, Blaber, M, Gronenborn, A.M, Clore, G.M, Caspar, D.L.D. 登録日 1998-10-22 公開日 1999-01-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Disordered water within a hydrophobic protein cavity visualized by x-ray crystallography. Proc.Natl.Acad.Sci.USA, 96, 1999
9GPB	THE ALLOSTERIC TRANSITION OF GLYCOGEN PHOSPHORYLASE 分子名称: GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION 著者 Barford, D, Johnson, L.N. 登録日 1990-12-17 公開日 1992-10-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The allosteric transition of glycogen phosphorylase. Nature, 340, 1989
9ILD	Complex structure of Cap3 and CD-NTase 分子名称: Cyclic GMP-AMP synthase, Peptidase, ZINC ION 著者 Li, F.Q, Ma, W.F. 登録日 2024-06-29 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (2.179 Å) 主引用文献 Structural and functional characterization of the bacterial Cap3 enzyme in deconjugation and regulation of the cyclic dinucleotide transferase CD-NTase To Be Published
7O5S	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-167 分子名称: 14-3-3 protein sigma, 4-methanoyl-~{N}-[(3-methoxyphenyl)methyl]benzamide, CHLORIDE ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-04-09 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
9ICD	CATALYTIC MECHANISM OF NADP+-DEPENDENT ISOCITRATE DEHYDROGENASE: IMPLICATIONS FROM THE STRUCTURES OF MAGNESIUM-ISOCITRATE AND NADP+ COMPLEXES 分子名称: ISOCITRATE DEHYDROGENASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Hurley, J.H, Dean, A.M, Koshland Jr, D.E, Stroud, R.M. 登録日 1991-07-29 公開日 1991-10-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Catalytic mechanism of NADP(+)-dependent isocitrate dehydrogenase: implications from the structures of magnesium-isocitrate and NADP+ complexes. Biochemistry, 30, 1991
7O6J	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-083 分子名称: (5-methanoyl-2-nitro-phenyl) 2-(3-methoxyphenyl)ethanoate, 14-3-3 protein sigma, CHLORIDE ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-04-11 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
9G5Z	Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF 分子名称: CHLORIDE ION, Endoribonuclease MazF, GLYCEROL, ... 著者 Prolic-Kalinsek, M, Haesaerts, S, Loris, R. 登録日 2024-07-17 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (3.42909384 Å) 主引用文献 Staphylococcus aureus MazF in complex with Nanobody 11 To Be Published
9FGT	SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76 (focused refinement) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Single chain fragment scFv76, Spike glycoprotein,Fibritin 著者 Berlinguer, M, Chaves-Sanjuan, A, Milazzo, F.M, Minenkova, O, De Santis, R, Bolognesi, M. 登録日 2024-05-25 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of scFv76 in complex with SARS-CoV-2 Omicron Spike protein To Be Published
7O5D	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-160 分子名称: 14-3-3 protein sigma, 4-methanoyl-~{N}-[(4-methoxyphenyl)methyl]benzamide, CHLORIDE ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-04-08 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
9RUB	CRYSTAL STRUCTURE OF ACTIVATED RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE COMPLEXED WITH ITS SUBSTRATE, RIBULOSE-1,5-BISPHOSPHATE 分子名称: FORMIC ACID, MAGNESIUM ION, RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE, ... 著者 Lundqvist, T, Schneider, G. 登録日 1990-11-28 公開日 1993-01-15 最終更新日 2021-02-24 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of activated ribulose-1,5-bisphosphate carboxylase complexed with its substrate, ribulose-1,5-bisphosphate. J.Biol.Chem., 266, 1991
9RAT	EFFECTS OF TEMPERATURE ON PROTEIN STRUCTURE AND DYNAMICS: X-RAY CRYSTALLOGRAPHIC STUDIES OF THE PROTEIN RIBONUCLEASE-A AT NINE DIFFERENT TEMPERATURES FROM 98 TO 320 K 分子名称: RIBONUCLEASE A 著者 Tilton Jr, R.F, Dewan, J.C, Petsko, G.A, Gilbert, W. 登録日 1991-08-13 公開日 1993-07-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K. Biochemistry, 31, 1992
7O5U	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-168 分子名称: 14-3-3 protein sigma, 4-methanoyl-~{N}-[(1-methylimidazol-2-yl)methyl]benzamide, CALCIUM ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-04-09 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
7OCA	Resting state full-length GluA1/A2 heterotertramer in complex with TARP gamma 8 and CNIH2 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Zhang, D, Watson, J.F, Matthews, P.M, Cais, O, Greger, I.H. 登録日 2021-04-26 公開日 2021-06-09 最終更新日 2021-06-30 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Gating and modulation of a hetero-octameric AMPA glutamate receptor. Nature, 594, 2021
9FBV	70S Escherichia coli ribosome with P-site initiatior tRNA. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S16, ... 著者 Koller, T.O, Wilson, D.N. 登録日 2024-05-14 公開日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis. Biorxiv, 2024
9FST	Yeast 20S proteasome with human beta1i (1-51) in complex with epoxyketone inhibitor LU-001i 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S. 登録日 2024-06-21 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites To Be Published
7O6K	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-080 分子名称: (5-methanoyl-2-nitro-phenyl) 3-chloranylbenzoate, 14-3-3 protein sigma, CALCIUM ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-04-11 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
7OCC	NTD of resting state GluA1/A2 heterotertramer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 1, ... 著者 Zhang, D, Watson, J.F, Matthews, P.M, Cais, O, Greger, I.H. 登録日 2021-04-26 公開日 2021-06-09 最終更新日 2021-06-30 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Gating and modulation of a hetero-octameric AMPA glutamate receptor. Nature, 594, 2021
9FT0	Yeast 20S proteasome in complex with epoxyketone inhibitor 42 分子名称: (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S. 登録日 2024-06-23 公開日 2024-07-10 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites to be published
7OH6	Cryo-EM structure of Drs2p-Cdc50p in the [PS]E2-AlFx state 分子名称: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P. 登録日 2021-05-09 公開日 2021-06-09 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase J.Mol.Biol., 2021
9FMD	Integrative model of the human post-catalytic spliceosome (P-complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Rothe, P, Plaschka, C, Vorlaender, M.K. 登録日 2024-06-05 公開日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Mechanism for the initiation of spliceosome disassembly. Nature, 2024
9FSV	Yeast 20S proteasome with human beta2i (1-53) in complex with epoxyketone inhibitor 42 分子名称: (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S. 登録日 2024-06-22 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites to be published
7OF5	Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2). 分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R. 登録日 2021-05-04 公開日 2021-06-09 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling. Nat Commun, 12, 2021

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