PDB: 45522 件ウェブページステータス検索Chemie searchBIRD

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3LR4	Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, barium phased at low pH 分子名称: BARIUM ION, CHLORIDE ION, Sensor protein 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-02-10 公開日 2010-06-16 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for pH sensing by the periplasmic domain of the risS histidine kinase from Burkholderia pseudomallei To be Published
3LSL	Piracetam bound to the ligand binding domain of GluA2 (flop form) 分子名称: 2-(2-oxopyrrolidin-1-yl)acetamide, GLUTAMIC ACID, Glutamate receptor 2, ... 著者 Ahmed, A.H, Oswald, R.E. 登録日 2010-02-12 公開日 2010-03-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.122 Å) 主引用文献 Piracetam Defines a New Binding Site for Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazole-propionic Acid (AMPA) Receptors. J.Med.Chem., 53, 2010
3VQ4	Fragments bound to HIV-1 integrase 分子名称: (5-phenyl-1,2-oxazol-3-yl)methanol, CADMIUM ION, POL polyprotein, ... 著者 Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J. 登録日 2012-03-20 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification? J Biomol Screen, 18, 2013
3LTJ	Structure of a new family of artificial alpha helicoidal repeat proteins (alpha-Rep) based on thermostable HEAT-like repeats 分子名称: AlphaRep-4 著者 Urvoas, A, Guellouz, A, Graille, M, van Tilbeurgh, H, Desmadril, M, Minard, P. 登録日 2010-02-16 公開日 2010-10-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins ( alpha Rep) based on thermostable HEAT-like repeats J.Mol.Biol., 404, 2010
3VKD	Crystal structure of MoeO5 soaked with 3-phosphoglycerate 分子名称: (2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acid, MAGNESIUM ION, MoeO5, ... 著者 Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T. 登録日 2011-11-12 公開日 2012-05-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes Angew.Chem.Int.Ed.Engl., 51, 2012
3LTU	5-SeMe-dU containing DNA 8mer 分子名称: 5'-D(*GP*(UMS)P*GP*(T5S)P*AP*CP*AP*C)-3' 著者 Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z. 登録日 2010-02-16 公開日 2010-03-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate Chemistryselect, 8, 2023
3VQW	Crystal structure of the SeMet substituted catalytic domain of pyrrolysyl-tRNA synthetase 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Pyrrolysine--tRNA ligase 著者 Yanagisawa, T, Sumida, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2012-04-01 公開日 2013-01-02 最終更新日 2013-09-04 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site Acta Crystallogr.,Sect.D, 69, 2013
3LS5	Anti-tetrahydrocannabinol Fab Fragment, Free Form 分子名称: Heavy chain of antibody Fab fragment, Light chain of antibody Fab fragment 著者 Niemi, M.H, Rouvinen, J. 登録日 2010-02-12 公開日 2010-06-02 最終更新日 2014-01-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A structural insight into the molecular recognition of a (-)-Delta9-tetrahydrocannabinol and the development of a sensitive, one-step, homogeneous immunocomplex-based assay for its detection J.Mol.Biol., 400, 2010
3VQ6	HIV-1 IN core domain in complex with (1-methyl-5-phenyl-1H-pyrazol-4-yl)methanol 分子名称: (1-methyl-5-phenyl-1H-pyrazol-4-yl)methanol, CADMIUM ION, POL polyprotein, ... 著者 Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J. 登録日 2012-03-20 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification? J Biomol Screen, 18, 2013
3VQY	Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with BocLys and AMPPNP (form 2) 分子名称: MAGNESIUM ION, N~6~-(tert-butoxycarbonyl)-L-lysine, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Yanagisawa, T, Sumida, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2012-04-02 公開日 2013-01-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site Acta Crystallogr.,Sect.D, 69, 2013
3LY9	Crystal structure of mutant D471N of the periplasmic domain of CadC 分子名称: Transcriptional activator cadC 著者 Eichinger, A, Skerra, A. 登録日 2010-02-26 公開日 2011-02-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of the sensory domain of Escherichia coli CadC, a member of the ToxR-like protein family. Protein Sci., 20, 2011
3LYF	Crystal Structure of the Rift Valley Fever Virus Nucleocapsid Protein 分子名称: GLYCEROL, Nucleocapsid protein 著者 Raymond, D.D, Smith, J.L. 登録日 2010-02-26 公開日 2010-06-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structure of the Rift Valley fever virus nucleocapsid protein reveals another architecture for RNA encapsidation. Proc.Natl.Acad.Sci.USA, 107, 2010
3LRC	Structure of E. coli AdiC (P1) 分子名称: Arginine/agmatine antiporter 著者 Gao, X, Lu, F, Zhou, L, Shi, Y. 登録日 2010-02-11 公開日 2010-02-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (4.004 Å) 主引用文献 Structure and mechanism of an amino acid antiporter Science, 324, 2009
3V8W	Crystal Structure of Interleukin-2 Inducible T-cell Kinase Itk Catalytic Domain with Thienopyrazolylindole Inhibitor 469 分子名称: 3-[2-(5-phenyl-2H-thieno[3,2-c]pyrazol-3-yl)-1H-indol-6-yl]pentan-3-ol, SULFATE ION, Tyrosine-protein kinase ITK/TSK 著者 McLean, L.R, Zhang, Y. 登録日 2011-12-23 公開日 2012-05-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase. Bioorg.Med.Chem.Lett., 22, 2012
3LV9	Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630 分子名称: PHOSPHATE ION, Putative transporter 著者 Nocek, B, Tesar, C, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2010-02-19 公開日 2010-03-09 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630 To be Published
3LTR	5-OMe-dU containing DNA 8mer 分子名称: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3', MAGNESIUM ION 著者 Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z. 登録日 2010-02-16 公開日 2010-03-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone. Nucleic Acids Res., 40, 2012
3VK5	Crystal structure of MoeO5 in complex with its product FPG 分子名称: (2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acid, MAGNESIUM ION, MoeO5 著者 Ren, F, Ko, T.-P, Huang, C.-H, Guo, R.-T. 登録日 2011-11-08 公開日 2012-05-09 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Insights into the mechanism of the antibiotic-synthesizing enzyme MoeO5 from crystal structures of different complexes Angew.Chem.Int.Ed.Engl., 51, 2012
3LYB	Structure of putative endoribonuclease(KP1_3112) from Klebsiella pneumoniae 分子名称: CALCIUM ION, Putative endoribonuclease 著者 Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2010-02-26 公開日 2010-03-23 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 Structure of putative endoribonuclease(KP1_3112) from Klebsiella pneumoniae To be published
3VQE	HIV-1 IN core domain in complex with [1-(4-fluorophenyl)-5-methyl-1H-pyrazol-4-yl]methanol 分子名称: CADMIUM ION, CHLORIDE ION, POL polyprotein, ... 著者 Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J. 登録日 2012-03-21 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification? J Biomol Screen, 18, 2013
3VQV	Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with AMPPNP (re-refined) 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Pyrrolysine--tRNA ligase 著者 Yanagisawa, T, Sumida, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2012-04-01 公開日 2013-01-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site Acta Crystallogr.,Sect.D, 69, 2013
3VTH	Crystal structure of full-length HypF in the phosphate- and nucleotide-bound form 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, FE (III) ION, GLYCEROL, ... 著者 Shomura, Y, Higuchi, Y. 登録日 2012-05-30 公開日 2012-07-04 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for the reaction mechanism of S-carbamoylation of HypE by HypF in the maturation of [NiFe]-hydrogenases J.Biol.Chem., 287, 2012
3VQC	HIV-1 IN core domain in complex with (5-METHYL-3-PHENYL-1,2-OXAZOL-4-YL)METHANOL 分子名称: (5-methyl-3-phenyl-1,2-oxazol-4-yl)methanol, CADMIUM ION, POL polyprotein, ... 著者 Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J. 登録日 2012-03-21 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification? J Biomol Screen, 18, 2013
3LZY	Crystal structure of Endothiapesin in complex with Xenon 分子名称: Endothiapepsin, GLYCEROL, XENON 著者 Behnen, J, Krueger, H, Klebe, G, Heine, A. 登録日 2010-03-02 公開日 2011-05-25 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Old acquantance rediscover: use of xenon/protein complexes as a generic tool for SAD phasing of inhouse data To be Published
3VVR	Crystal structure of MATE in complex with MaD5 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide 著者 Tanaka, Y, Ishitani, R, Nureki, O. 登録日 2012-07-27 公開日 2013-04-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature, 496, 2013
3W07	Atomic resolution structure of orotidine 5'-monophosphate decarboxylase from Methanothermobacter thermoautotrophicus bound with UMP. 分子名称: GLYCEROL, Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE 著者 Fujihashi, M, Pai, E.F, Miki, K. 登録日 2012-10-22 公開日 2013-02-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.03 Å) 主引用文献 Atomic resolution structure of the orotidine 5'-monophosphate decarboxylase product complex combined with surface plasmon resonance analysis: implications for the catalytic mechanism. J.Biol.Chem., 288, 2013

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