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3WZ6
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Endothiapepsin in complex with Gewald reaction-derived inhibitor (5)
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Kuhnert, M, Steuber, H, Diederich, W.E.
登録日2014-09-19
公開日2015-08-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.404 Å)
主引用文献Tracing binding modes in hit-to-lead optimization: chameleon-like poses of aspartic protease inhibitors
Angew.Chem.Int.Ed.Engl., 54, 2015
3ZHL
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The crystal structure of single domain antibody 8-14 scaffold
分子名称: GLYCEROL, MG8-14 SCAFFOLD ANTIBODY
著者Song, H.-N, Woo, E.-J, Lim, H.-K.
登録日2012-12-22
公開日2014-01-08
最終更新日2014-07-16
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Directed Evolution of Human Heavy Chain Variable Domain (Vh) Using in Vivo Protein Fitness Filter.
Plos One, 9, 2014
3ZJH
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Trp(60)B9Ala mutation of M.acetivorans protoglobin in complex with cyanide
分子名称: CYANIDE ION, PROTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
著者Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
登録日2013-01-18
公開日2013-06-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
1XVT
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BU of 1xvt by Molmil
Crystal Structure of Native CaiB in complex with coenzyme A
分子名称: COENZYME A, Crotonobetainyl-CoA:carnitine CoA-transferase
著者Rangarajan, E.S, Li, Y, Iannuzzi, P, Cygler, M, Matte, A.
登録日2004-10-28
公開日2005-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Escherichia coli Crotonobetainyl-CoA: Carnitine CoA-Transferase (CaiB) and Its Complexes with CoA and Carnitinyl-CoA.
Biochemistry, 44, 2005
3ZGN
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Crystal structures of Escherichia coli IspH in complex with TMBPP a potent inhibitor of the methylerythritol phosphate pathway
分子名称: (2E)-3-methyl-4-sulfanylbut-2-en-1-yl trihydrogen diphosphate, 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, IRON/SULFUR CLUSTER
著者Borel, F, Barbier, E, Kratsutsky, S, Janthawornpong, K, Rohmer, M, Dale Poulter, C, Ferrer, J.L, Seemann, M.
登録日2012-12-18
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Further Insight into Crystal Structures of Escherichia coli IspH/LytB in Complex with Two Potent Inhibitors of the MEP Pathway: A Starting Point for Rational Design of New Antimicrobials.
Chembiochem, 18, 2017
3ZJJ
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Phe(93)E11Leu mutation of M.acetivorans protoglobin in complex with cyanide
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CYANIDE ION, GLYCEROL, ...
著者Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
登録日2013-01-18
公開日2013-06-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
3ZJS
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M.acetivorans protoglobin in complex with azide and Xenon
分子名称: AZIDE ION, PROTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
登録日2013-01-18
公開日2013-06-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
3B6K
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WrbA from Escherichia coli, Benzoquinone complex
分子名称: 1,4-benzoquinone, FLAVIN MONONUCLEOTIDE, Flavoprotein wrbA, ...
著者Andrade, S.L.A, Patridge, E.V, Ferry, J.G, Einsle, O.
登録日2007-10-29
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of the NADH:quinone oxidoreductase WrbA from Escherichia coli.
J.Bacteriol., 189, 2007
3ZJM
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Ile(149)G11Phe mutation of M.acetivorans protoglobin in complex with cyanide
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CYANIDE ION, GLYCEROL, ...
著者Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
登録日2013-01-18
公開日2013-06-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
3ZJP
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M.acetivorans protoglobin in complex with imidazole
分子名称: GLYCEROL, IMIDAZOLE, PHOSPHATE ION, ...
著者Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
登録日2013-01-18
公開日2013-06-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
3ZTT
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BU of 3ztt by Molmil
Crystal structure of pneumococcal surface antigen PsaA with manganese
分子名称: MANGANESE (II) ION, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
著者McDevitt, C.A, Ogunniyi, A.D, Valkov, E, Lawrence, M.C, Kobe, B, McEwan, A.G, Paton, J.C.
登録日2011-07-12
公開日2011-12-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A molecular mechanism for bacterial susceptibility to zinc.
PLoS Pathog., 7, 2011
3UGY
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HBI (F80Y) CO bound
分子名称: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UHD
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BU of 3uhd by Molmil
HBI (N100A) CO bound
分子名称: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UI0
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BU of 3ui0 by Molmil
HBI (T72G) deoxy
分子名称: Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UHQ
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BU of 3uhq by Molmil
HBI (L36A) deoxy
分子名称: Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UHV
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BU of 3uhv by Molmil
HBI (M37V,L73I) deoxy
分子名称: Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
3GDK
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BU of 3gdk by Molmil
Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae
分子名称: Orotidine 5'-phosphate decarboxylase
著者Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
登録日2009-02-24
公開日2009-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization.
Biochemistry, 48, 2009
2ZEO
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BU of 2zeo by Molmil
Crystal structure of the human glutaminyl cyclase mutant D305E at 1.66 angstrom resolution
分子名称: Glutaminyl-peptide cyclotransferase, SULFATE ION, ZINC ION
著者Huang, K.F, Wang, Y.R, Chang, E.C, Chou, T.L, Wang, A.H.
登録日2007-12-13
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献A conserved hydrogen-bond network in the catalytic centre of animal glutaminyl cyclases is critical for catalysis.
Biochem.J., 411, 2008
1Y52
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BU of 1y52 by Molmil
structure of insect cell (Baculovirus) expressed AVR4 (C122S)-biotin complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin-related protein 4/5, BIOTIN
著者Eisenberg-Domovich, Y, Hytonen, V.P, Wilchek, M, Bayer, E.A, Kulomaa, M.S, Livnah, O.
登録日2004-12-02
公開日2005-05-24
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High-resolution crystal structure of an avidin-related protein: insight into high-affinity biotin binding and protein stability.
Acta Crystallogr.,Sect.D, 61, 2005
2ZEF
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BU of 2zef by Molmil
Crystal structure of the human glutaminyl cyclase mutant E201D at 1.67 angstrom resolution
分子名称: Glutaminyl-peptide cyclotransferase, SULFATE ION, ZINC ION
著者Huang, K.F, Wang, Y.R, Chang, E.C, Chou, T.L, Wang, A.H.
登録日2007-12-12
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献A conserved hydrogen-bond network in the catalytic centre of animal glutaminyl cyclases is critical for catalysis.
Biochem.J., 411, 2008
3UHE
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BU of 3uhe by Molmil
HBI (M37V,L73I) CO bound
分子名称: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FX6
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BU of 4fx6 by Molmil
Crystal structure of the mutant V182A.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
登録日2012-07-02
公開日2013-05-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.531 Å)
主引用文献Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3UHS
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BU of 3uhs by Molmil
HBI (L36M) deoxy
分子名称: Globin-1, PROTOPORPHYRIN IX CONTAINING FE
著者Ren, Z, Srajer, V, Knapp, J.E, Royer Jr, W.E.
登録日2011-11-03
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GC4
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BU of 4gc4 by Molmil
Crystal structure of the mutant R160A.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
登録日2012-07-29
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4204 Å)
主引用文献Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
2A3F
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BU of 2a3f by Molmil
Crystal structure of nitrophorin 2 aqua complex
分子名称: Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE
著者Weichsel, A, Berry, R.E, Walker, F.A, Montfort, W.R.
登録日2005-06-24
公開日2006-06-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus.
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