PDB: 17012 件ウェブページステータス検索Chemie searchBIRD

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3HUK	Benzylacetate in complex with T4 lysozyme L99A/M102Q 分子名称: BETA-MERCAPTOETHANOL, Lysozyme, PHOSPHATE ION, ... 著者 Boyce, S.E, Mobley, D.L, Rocklin, G.J, Graves, A.P, Dill, K.A, Shoichet, B.K. 登録日 2009-06-14 公開日 2009-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site. J.Mol.Biol., 394, 2009
1ZMK	Crystal structure of human alpha-defensin-2 (variant Gly16-> D-ALA), P 42 21 2 space group 分子名称: CHLORIDE ION, GLYCEROL, Neutrophil defensin 2 著者 Lubkowski, J, Prahl, A, Lu, W. 登録日 2005-05-10 公開日 2005-08-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem., 280, 2005
1YYV	Putative transcriptional regulator ytfH from Salmonella typhimurium 分子名称: CHLORIDE ION, putative transcriptional regulator 著者 Osipiuk, J, Quartey, P, Lezondra, L, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2005-02-25 公開日 2005-04-05 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 X-ray crystal structure of putative transcriptional regulator ytfH from Salmonella typhimurium. To be Published
1Z2V	Crystal Structure of Glu60 deletion Mutant of Human Acidic Fibroblast Growth Factor 分子名称: Heparin-binding growth factor 1, SULFATE ION 著者 Lee, J, Blaber, M. 登録日 2005-03-09 公開日 2006-02-07 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Conversion of type I 4:6 to 3:5 beta-turn types in human acidic fibroblast growth factor: Effects upon structure, stability, folding, and mitogenic function. Proteins, 62, 2006
1ZMH	Crystal structure of human neutrophil peptide 2, HNP-2 (variant Gly16-> D-Ala) 分子名称: GLYCEROL, HEXAETHYLENE GLYCOL, Neutrophil defensin 2, ... 著者 Lubkowski, J, Prahl, A, Lu, W. 登録日 2005-05-10 公開日 2005-08-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem., 280, 2005
262L	STRUCTURAL CHARACTERISATION OF AN ENGINEERED TANDEM REPEAT CONTRASTS THE IMPORTANCE OF CONTEXT AND SEQUENCE IN PROTEIN FOLDING 分子名称: LYSOZYME 著者 Sagermann, M, Baase, W.A, Matthews, B.W. 登録日 1999-05-11 公開日 1999-05-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural characterization of an engineered tandem repeat contrasts the importance of context and sequence in protein folding. Proc.Natl.Acad.Sci.USA, 96, 1999
258D	FACTORS AFFECTING SEQUENCE SELECTIVITY ON NOGALAMYCIN INTERCALATION: THE CRYSTAL STRUCTURE OF D(TGTACA)-NOGALAMYCIN 分子名称: ACETATE ION, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3'), NOGALAMYCIN, ... 著者 Smith, C.K, Brannigan, J.A, Moore, M.H. 登録日 1996-05-12 公開日 1996-06-20 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Factors affecting DNA sequence selectivity of nogalamycin intercalation: the crystal structure of d(TGTACA)2-nogalamycin2. J.Mol.Biol., 263, 1996
1Z13	Crystal Structure of Bovine Low Molecular Weight PTPase Complexed with Molybdate 分子名称: Low molecular weight phosphotyrosine protein phosphatase, MOLYBDATE ION 著者 Zhang, M, Zhou, M, Van Etten, R.L, Stauffacher, C.V. 登録日 2005-03-03 公開日 2005-04-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure of Bovine Low Molecular Weight Phosphotyrosyl Phosphatase Complexed with the Transition State Analog Vanadate Biochemistry, 36, 1997
1Y85	T-To-T(High) quaternary transitions in human hemoglobin: desHIS146beta deoxy low-salt 分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE 著者 Kavanaugh, J.S, Rogers, P.H, Arnone, A. 登録日 2004-12-10 公開日 2004-12-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions. Biochemistry, 44, 2005
1Y2M	Crystal structure of phenylalanine ammonia-lyase from yeast Rhododporidium toruloides 分子名称: Phenylalanine ammonia-lyase 著者 Wang, L, Gamez, A, Sarkissian, C.N, Straub, M, Patch, M.G, Han, G.W, Scriver, C.R, Stevens, R.C. 登録日 2004-11-22 公開日 2005-11-01 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure-based chemical modification strategy for enzyme replacement treatment of phenylketonuria. Mol.Genet.Metab., 86, 2005
3EBK	Crystal structure of major allergens, Bla g 4 from cockroaches 分子名称: Allergen Bla g 4 著者 Tan, Y.W, Chan, S.L, Chew, F.T, Sivaraman, J, Mok, Y.K. 登録日 2008-08-28 公開日 2008-12-02 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of two major allergens, Bla g 4 and Per a 4, from cockroaches and their IgE binding epitopes. J.Biol.Chem., 284, 2008
3G2Z	CTX-M-9 class A beta-lactamase complexed with compound 2 (GZ2) 分子名称: 3-(1H-tetrazol-5-ylamino)cyclohex-2-en-1-one, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G34	CTX-M-9 class A beta-lactamase complexed with compound 11 (1CE) 分子名称: 3-(1H-tetrazol-5-ylmethyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE, ... 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G31	CTX-M-9 class A beta-lactamase complexed with compound 4 (GF1) 分子名称: (2S)-2-[(3aR,4R,7S,7aS)-1,3-dioxooctahydro-2H-4,7-methanoisoindol-2-yl]propanoic acid, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE, ... 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G30	CTX-M-9 class A beta-lactamase complexed with compound 3 (G30) 分子名称: (1S,2R)-2-[(2,5-difluorophenyl)carbamoyl]cyclopropanecarboxylic acid, Beta-lactamase CTX-M-9a 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G32	CTX-M-9 class A beta-lactamase complexed with compound 6 (3G3) 分子名称: 2-[2-(1H-tetrazol-5-yl)ethyl]-1H-isoindole-1,3(2H)-dione, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE, ... 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G2Y	CTX-M-9 class A beta-lactamase complexed with compound 1 (GF4) 分子名称: 4-ethyl-5-methyl-2-(1H-tetrazol-5-yl)-1,2-dihydro-3H-pyrazol-3-one, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
3G35	CTX-M-9 class A beta-lactamase complexed with compound 12 (F13) 分子名称: 3-fluoro-N-[3-(1H-tetrazol-5-yl)phenyl]benzamide, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE 著者 Chen, Y, Shoichet, B.K. 登録日 2009-02-01 公開日 2009-03-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Molecular docking and ligand specificity in fragment-based inhibitor discovery Nat.Chem.Biol., 5, 2009
2E3G	NMR structure of DEF-DAA, a mutant of anopheles defensin DEF-AAA 分子名称: defensin, mutant DEF-DAA 著者 Landon, C, Barbault, F, Vovelle, F. 登録日 2006-11-22 公開日 2007-11-13 最終更新日 2021-10-20 実験手法 SOLUTION NMR 主引用文献 Rational design of peptides active against the gram positive bacteria Staphylococcus aureus Proteins, 72, 2008
2E3F	NMR structure of DEF-BAT, a mutant of anopheles defensin DEF-AAA 分子名称: defensin, mutant DEF-BAT 著者 Landon, C, Barbault, F, Vovelle, F. 登録日 2006-11-22 公開日 2007-11-13 最終更新日 2021-10-20 実験手法 SOLUTION NMR 主引用文献 Rational design of peptides active against the gram positive bacteria Staphylococcus aureus Proteins, 72, 2008
2VUG	The structure of an archaeal homodimeric RNA ligase 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, PAB1020, ... 著者 Brooks, M.A, Meslet-Cladiere, L, Graille, M, Kuhn, J, Blondeau, K, Myllykallio, H, van Tilbeurgh, H. 登録日 2008-05-26 公開日 2008-06-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The structure of an archaeal homodimeric ligase which has RNA circularization activity. Protein Sci., 17, 2008
3EBW	Crystal structure of major allergens, Per a 4 from cockroaches 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Per a 4 allergen 著者 Tan, Y.W, Chan, S.L, Chew, F.T, Sivaraman, J, Mok, Y.K. 登録日 2008-08-28 公開日 2008-12-02 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structures of two major allergens, Bla g 4 and Per a 4, from cockroaches and their IgE binding epitopes. J.Biol.Chem., 284, 2008
2VRX	Structure of Aurora B kinase in complex with ZM447439 分子名称: INNER CENTROMERE PROTEIN A, N-(4-{[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinazolin-4-yl]amino}phenyl)benzamide, SERINE/THREONINE-PROTEIN KINASE 12-A 著者 Girdler, F, Sessa, F, Patercoli, S, Villa, F, Ridgway, E, Musacchio, A, Taylor, S.S. 登録日 2008-04-16 公開日 2008-07-01 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Molecular Basis of Drug Resistance in Aurora Kinases. Chem.Biol., 15, 2008
3H1L	Chicken cytochrome BC1 complex with ascochlorin bound at QO and QI sites 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 3-chloro-4,6-dihydroxy-2-methyl-5-{(2E,4E)-3-methyl-5-[(1R,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]penta-2,4-dien-1-yl}benzaldehyde, CARDIOLIPIN, ... 著者 Berry, E.A, Huang, L.S, Minagawa, N. 登録日 2009-04-12 公開日 2010-01-05 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Ascochlorin is a novel, specific inhibitor of the mitochondrial cytochrome bc(1) complex. Biochim.Biophys.Acta, 1797, 2010
2E3E	NMR structure of DEF-BBB, a mutant of anopheles defensin DEF-AAA 分子名称: defensin, mutant DEF-BBB 著者 Landon, C, Barbault, F, Vovelle, F. 登録日 2006-11-22 公開日 2007-11-13 最終更新日 2021-10-20 実験手法 SOLUTION NMR 主引用文献 Rational design of peptides active against the gram positive bacteria Staphylococcus aureus Proteins, 72, 2008

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