Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2VDH
DownloadVisualize
BU of 2vdh by Molmil
Crystal structure of Chlamydomonas reinhardtii Rubisco with a large- subunit C172S mutation
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Garcia-Murria, M.-J, Karkehabadi, S, Marin-Navarro, J, Satagopan, S, Andersson, I, Spreitzer, R.J, Moreno, J.
登録日2007-10-09
公開日2008-11-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Functional Consequences of the Replacement of Proximal Residues Cys-172 and Cys-192 in the Large Subunit of Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase from Chlamydomonas Reinhardtii
Biochem.J., 411, 2008
3DPJ
DownloadVisualize
BU of 3dpj by Molmil
The crystal structure of a TetR transcription regulator from Silicibacter pomeroyi DSS
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Transcription regulator, ...
著者Tan, K, Li, H, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-07-08
公開日2008-09-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of a TetR transcription regulator from Silicibacter pomeroyi DSS
To be Published
3EU8
DownloadVisualize
BU of 3eu8 by Molmil
Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2008-10-09
公開日2008-10-21
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
To be published
3DY3
DownloadVisualize
BU of 3dy3 by Molmil
Crystal structure of yeast 20S proteasome in complex with the epimer form of spirolactacystin
分子名称: (3R,4R)-3-hydroxy-2-[(1S)-1-hydroxy-2-methylpropyl]-4-methyl-5-oxo-D-proline, Proteasome component C1, Proteasome component C11, ...
著者Groll, M, Balskus, E, Jacobsen, E.
登録日2008-07-25
公開日2008-11-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural analysis of spiro beta-lactone proteasome inhibitors.
J.Am.Chem.Soc., 130, 2008
3E1J
DownloadVisualize
BU of 3e1j by Molmil
Crystal structure of E. coli Bacterioferritin (BFR) with an unoccupied ferroxidase centre (APO-BFR).
分子名称: Bacterioferritin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N.
登録日2008-08-04
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for iron mineralization by bacterioferritin
J.Am.Chem.Soc., 131, 2009
3DZA
DownloadVisualize
BU of 3dza by Molmil
Crystal structure of a putative membrane protein of unknown function (yfdx) from klebsiella pneumoniae subsp. at 1.65 A resolution
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ZINC ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2008-07-29
公開日2008-08-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of putative membrane protein of unknown function (YP_001337144.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.65 A resolution
To be published
3EYD
DownloadVisualize
BU of 3eyd by Molmil
Structure of HCV NS3-4A Protease with an Inhibitor Derived from a Boronic Acid
分子名称: HCV NS3, HCV NS4a peptide, ZINC ION, ...
著者Venkatraman, S, Wu, W, Prongay, A.J, Girijavallabhan, V, Njoroge, F.G.
登録日2008-10-20
公開日2009-02-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Potent inhibitors of HCV-NS3 protease derived from boronic acids.
Bioorg.Med.Chem.Lett., 19, 2009
2RF7
DownloadVisualize
BU of 2rf7 by Molmil
Crystal structure of the escherichia coli nrfa mutant Q263E
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cytochrome c-552, ...
著者Clarke, T.A, Richardson, D.J, Hemmings, A.M.
登録日2007-09-28
公開日2008-03-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Role of a Conserved Glutamine Residue in Tuning the Catalytic Activity of Escherichia coli Cytochrome c Nitrite Reductase.
Biochemistry, 47, 2008
3EXG
DownloadVisualize
BU of 3exg by Molmil
Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex
分子名称: POTASSIUM ION, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, ...
著者Kato, M, Wynn, R.M, Chuang, J.L, Tso, S.-C, Machius, M, Li, J, Chuang, D.T.
登録日2008-10-16
公開日2008-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.011 Å)
主引用文献Structural basis for inactivation of the human pyruvate dehydrogenase complex by phosphorylation: role of disordered phosphorylation loops.
Structure, 16, 2008
3E1M
DownloadVisualize
BU of 3e1m by Molmil
Crystal structure of E. coli Bacterioferritin (BFR) obtained after soaking APO-BFR crystals for 2.5 minutes in FE2+ (2.5M FE(II)-BFR)
分子名称: BACTERIOFERRITIN, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N.
登録日2008-08-04
公開日2009-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for iron mineralization by bacterioferritin
J.Am.Chem.Soc., 131, 2009
3F2W
DownloadVisualize
BU of 3f2w by Molmil
Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.
分子名称: BARIUM ION, FLAVIN MONONUCLEOTIDE, FMN riboswitch, ...
著者Serganov, A.A, Huang, L.
登録日2008-10-30
公開日2009-01-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F98
DownloadVisualize
BU of 3f98 by Molmil
Crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by tabun
分子名称: FORMIC ACID, Platelet-activating factor acetylhydrolase, R-ETHYL N,N-DIMETHYLPHOSPHONAMIDATE
著者Samanta, U, Bahnson, B.J.
登録日2008-11-13
公開日2009-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of human group-VIIA phospholipase A2 inhibited by organophosphorus nerve agents exhibit non-aged complexes.
Biochem Pharmacol, 78, 2009
3FCU
DownloadVisualize
BU of 3fcu by Molmil
Structure of headpiece of integrin aIIBb3 in open conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, CALCIUM ION, ...
著者Zhu, J, Luo, B.-H, Xiao, T, Zhang, C, Nishida, N, Springer, T.A.
登録日2008-11-22
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of a complete integrin ectodomain in a physiologic resting state and activation and deactivation by applied forces.
Mol.Cell, 32, 2008
3E08
DownloadVisualize
BU of 3e08 by Molmil
H55S mutant Xanthomonas campestris tryptophan 2,3-dioxygenase
分子名称: PROTOPORPHYRIN IX CONTAINING FE, TRYPTOPHAN, Tryptophan 2,3-dioxygenase
著者Mowat, C.G, Campbell, L.P.
登録日2008-07-31
公開日2008-09-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Histidine 55 of tryptophan 2,3-dioxygenase is not an active site base but regulates catalysis by controlling substrate binding
Biochemistry, 47, 2008
3E1Q
DownloadVisualize
BU of 3e1q by Molmil
Crystal structure of W133F variant E. coli Bacterioferritn with iron.
分子名称: BACTERIOFERRITIN, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Crow, A, Lawson, T.L, Lewin, A, Moore, G.R, Le Brun, N.E.
登録日2008-08-04
公開日2009-08-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Monitoring the iron status of the ferroxidase center of Escherichia coli bacterioferritin using fluorescence spectroscopy.
Biochemistry, 48, 2009
3DUG
DownloadVisualize
BU of 3dug by Molmil
Crystal structure of zn-dependent arginine carboxypeptidase complexed with zinc
分子名称: ARGININE, GLYCEROL, ZINC ION, ...
著者Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Freeman, J, Iizuka, M, Bain, K, Rodgers, L, Raushel, F, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-07-17
公開日2008-08-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009
2VIQ
DownloadVisualize
BU of 2viq by Molmil
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
分子名称: 4-(2-aminoethoxy)-N-(2,5-diethoxyphenyl)-3,5-dimethylbenzamide, ACETATE ION, UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B
著者Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G.
登録日2007-12-05
公開日2008-01-22
最終更新日2017-07-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator.
J.Med.Chem., 51, 2008
3E1N
DownloadVisualize
BU of 3e1n by Molmil
Crystal structure of E. coli Bacterioferritin (BFR) after a 65 minute (aerobic) exposure to FE(II) revealing a possible MU-OXO bridge/MU-Hydroxy bridged DIIRON intermediate at the ferroxidase centre. (FE(III)-O-FE(III)-BFR).
分子名称: BACTERIOFERRITIN, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N.
登録日2008-08-04
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for iron mineralization by bacterioferritin
J.Am.Chem.Soc., 131, 2009
2VDC
DownloadVisualize
BU of 2vdc by Molmil
THE 9.5 A RESOLUTION STRUCTURE OF GLUTAMATE SYNTHASE FROM CRYO-ELECTRON MICROSCOPY AND ITS OLIGOMERIZATION BEHAVIOR IN SOLUTION: FUNCTIONAL IMPLICATIONS.
分子名称: 2-OXOGLUTARIC ACID, FE3-S4 CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Cottevieille, M, Larquet, E, Jonic, S, Petoukhov, M.V, Caprini, G, Paravisi, S, Svergun, D.I, Vanoni, M.A, Boisset, N.
登録日2007-10-04
公開日2008-01-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献The Subnanometer Resolution Structure of the Glutamate Synthase 1.2-Mda Hexamer by Cryoelectron Microscopy and its Oligomerization Behavior in Solution: Functional Implications.
J.Biol.Chem., 283, 2008
3IEM
DownloadVisualize
BU of 3iem by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
分子名称: CITRATE ANION, RNA (5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3'), Ribonuclease TTHA0252, ...
著者Ishikawa, H, Nakagawa, N, Kuramitus, S, Yokoyama, S, Masui, R.
登録日2009-07-23
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
To be Published
2VL4
DownloadVisualize
BU of 2vl4 by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
分子名称: (2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
著者Tailford, L.E, Offen, W.A, Smith, N.L, Dumon, C, Moreland, C, Gratien, J, Heck, M.P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
登録日2008-01-08
公開日2008-04-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
3E1O
DownloadVisualize
BU of 3e1o by Molmil
Crystal structure of E. coli Bacterioferritin (BFR) with two ZN(II) ION sites at the Ferroxidase centre (ZN-BFR).
分子名称: BACTERIOFERRITIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
著者Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N.
登録日2008-08-04
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis for iron mineralization by bacterioferritin
J.Am.Chem.Soc., 131, 2009
3IEK
DownloadVisualize
BU of 3iek by Molmil
Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R.
登録日2009-07-22
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
To be Published
3E8H
DownloadVisualize
BU of 3e8h by Molmil
Crystal Structure of the the open NaK channel-K+ complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein
著者Jiang, Y, Alam, A.
登録日2008-08-19
公開日2008-12-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of ion selectivity in the NaK channel
Nat.Struct.Mol.Biol., 16, 2009
3FVT
DownloadVisualize
BU of 3fvt by Molmil
Crystal Structure of Acetyl Xylan Esterase from Bacillus pumilus, monoclinic crystal form II
分子名称: Acetyl xylan esterase, CHLORIDE ION, GLYCEROL
著者Krastanova, I, Cassetta, A, Lamba, D.
登録日2009-01-16
公開日2010-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and functional studies of Bacillus pumilus acetyl xylan esterase
To be Published

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon