Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7S4Y
DownloadVisualize
BU of 7s4y by Molmil
Serial Macromolecular Crystallography at ALBA Synchrotron Light Source - Insulin
分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ...
著者Martin-Garcia, J.M, Botha, S, Hu, H, Jernigan, R, Castellvi, A, Lisova, S, Gil, F, Calisto, B, Crespo, I, Roy-Chowdbury, S, Grieco, A, Ketawala, G, Weierstall, U, Spence, J, Fromme, P, Zatsepin, N, Boer, R, Carpena, X.
登録日2021-09-09
公開日2021-10-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Serial macromolecular crystallography at ALBA Synchrotron Light Source.
J.Synchrotron Radiat., 29, 2022
6MU0
DownloadVisualize
BU of 6mu0 by Molmil
Crystal Structure of Ribose-5-phosphate Isomerase B from Mycoplasma genitalium with bound Ribulose-5-phosphate
分子名称: Probable ribose-5-phosphate isomerase B, RIBULOSE-5-PHOSPHATE
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-10-22
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal Structure of Ribose-5-phosphate Isomerase B from Mycoplasma genitalium with bound Ribulose-5-phosphate
to be published
5D84
DownloadVisualize
BU of 5d84 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnA bound to PLP
分子名称: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, Probable siderophore biosynthesis protein SbnA
著者Grigg, J.C, Kobylarz, M.J, Liu, Y, Lee, M.S.F, Heinrichs, D.E, Murphy, M.E.P.
登録日2015-08-15
公開日2016-02-03
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Biochemistry, 55, 2016
7B4X
DownloadVisualize
BU of 7b4x by Molmil
Notum complex with ARUK3002697
分子名称: 1,2-ETHANEDIOL, 6-(4-methylphenyl)sulfanyl-2~{H}-[1,2,4]triazolo[4,3-b]pyridazin-3-one, DIMETHYL SULFOXIDE, ...
著者Jones, E.Y, Fish, P.
登録日2020-12-02
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
8CT3
DownloadVisualize
BU of 8ct3 by Molmil
Local refinement of band3-I transmembrane region from class 2 of erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Band 3 anion transport protein, CHOLESTEROL, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8K0E
DownloadVisualize
BU of 8k0e by Molmil
Human collagen prolyl processing enzyme complex, P3H1/CRTAP heterodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cartilage-associated protein, FE (III) ION, ...
著者Li, W, Peng, J, Yao, D, Rao, B, Xia, Y, Wang, Q, Li, S, Cao, M, Shen, Y, Ma, P, Liao, R, Qin, A, Zhao, J, Cao, Y.
登録日2023-07-08
公開日2024-09-18
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献The structural basis for the collagen processing by human P3H1/CRTAP/PPIB ternary complex.
Nat Commun, 15, 2024
7SL6
DownloadVisualize
BU of 7sl6 by Molmil
Full-length insulin receptor bound with site 2 binding deficient mutant insulin (B-L17R) -- symmetric conformation
分子名称: Insulin A chain, Insulin B chain, Insulin receptor
著者Bai, X.C, Choi, E.
登録日2021-10-22
公開日2022-03-30
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Synergistic activation of the insulin receptor via two distinct sites.
Nat.Struct.Mol.Biol., 29, 2022
7SL4
DownloadVisualize
BU of 7sl4 by Molmil
Full-length insulin receptor bound with site 2 binding deficient mutant insulin (B-L17R) -- asymmetric conformation
分子名称: Insulin A chain, Insulin B chain, Insulin receptor
著者Bai, X.C, Choi, E.
登録日2021-10-22
公開日2022-03-30
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Synergistic activation of the insulin receptor via two distinct sites.
Nat.Struct.Mol.Biol., 29, 2022
6NP5
DownloadVisualize
BU of 6np5 by Molmil
AAC-VIa bound to Kanamycin B
分子名称: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION
著者Kumar, P, Cuneo, M.J.
登録日2019-01-17
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.353 Å)
主引用文献Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad.
Angew.Chem.Int.Ed.Engl., 58, 2019
4RSK
DownloadVisualize
BU of 4rsk by Molmil
STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A COMPLEXED WITH 3'-UMP
分子名称: 3'-URIDINEMONOPHOSPHATE, RIBONUCLEASE A
著者Schultz, L.W, Fisher, B.M, Raines, R.T.
登録日1998-04-09
公開日1998-12-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Coulombic Effects of Remote Subsites on the Active Site of Ribonuclease A
Biochemistry, 37, 1998
1K2H
DownloadVisualize
BU of 1k2h by Molmil
Three-dimensional Solution Structure of apo-S100A1.
分子名称: S-100 protein, alpha chain
著者Rustandi, R.R, Baldisseri, D.M, Inman, K.G, Nizner, P, Hamilton, S.M, Landar, A, Landar, A, Zimmer, D.B, Weber, D.J.
登録日2001-09-27
公開日2002-02-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the calcium-signaling protein apo-S100A1 as determined by NMR.
Biochemistry, 41, 2002
6TQ4
DownloadVisualize
BU of 6tq4 by Molmil
Crystal structure of the Orexin-1 receptor in complex with Compound 16
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 2-[1-(phenylsulfonyl)-1,8-diazaspiro[4.5]decan-8-yl]-1,3-benzoxazole, Orexin receptor type 1, ...
著者Rappas, M, Ali, A, Bennett, K.A, Brown, J.D, Bucknell, S.J, Congreve, M, Cooke, R.M, Cseke, G, de Graaf, C, Dore, A.S, Errey, J.C, Jazayeri, A, Marshall, F.H, Mason, J.S, Mould, R, Patel, J.C, Tehan, B.G, Weir, M, Christopher, J.A.
登録日2019-12-16
公開日2020-01-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Comparison of Orexin 1 and Orexin 2 Ligand Binding Modes Using X-ray Crystallography and Computational Analysis.
J.Med.Chem., 63, 2020
7EK6
DownloadVisualize
BU of 7ek6 by Molmil
Structure of viral peptides IPB19/N52
分子名称: Spike protein S2
著者Yu, D, Qin, B, Cui, S, He, Y.
登録日2021-04-04
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.243 Å)
主引用文献Structure-based design and characterization of novel fusion-inhibitory lipopeptides against SARS-CoV-2 and emerging variants.
Emerg Microbes Infect, 10, 2021
6W5O
DownloadVisualize
BU of 6w5o by Molmil
Class D beta-lactamase BAT-2 delta mutant
分子名称: 1,2-ETHANEDIOL, BAT-2 Beta-lactamase delta mutant, CITRATE ANION
著者Smith, C.A, Vakulenko, S.B, Stewart, N.K, Toth, M.
登録日2020-03-13
公開日2020-06-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A surface loop modulates activity of the Bacillus class D beta-lactamases.
J.Struct.Biol., 211, 2020
6JR3
DownloadVisualize
BU of 6jr3 by Molmil
Crystal structure of insulin hexamer fitted into cryo EM density map where each dimer was kept as rigid body
分子名称: Insulin A chain, Insulin B chain
著者Sengupta, J, Pathak, B.K, Bhakta, S.
登録日2019-04-02
公開日2020-04-22
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (14.5 Å)
主引用文献Resveratrol as a nontoxic excipient stabilizes insulin in a bioactive hexameric form.
J.Comput.Aided Mol.Des., 34, 2020
1KRJ
DownloadVisualize
BU of 1krj by Molmil
Engineering Calcium-binding site into Cytochrome c Peroxidase (CcP)
分子名称: Cytochrome c Peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Bonagura, C.A, Bhaskar, B, Sundaramoorthy, M, Poulos, T.L.
登録日2002-01-09
公開日2002-01-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conversion of an engineered potassium-binding site into a calcium-selective site in cytochrome c peroxidase.
J.Biol.Chem., 274, 1999
1MNY
DownloadVisualize
BU of 1mny by Molmil
Dimethyl propionate ester heme-containing cytochrome b5
分子名称: DIMETHYL PROPIONATE ESTER HEME, cytochrome b5
著者Banci, L, Bertini, I, Branchini, B.R, Hajieva, P, Spyroulias, G.A, Turano, P.
登録日2002-09-06
公開日2002-11-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Dimethyl propionate ester heme-containing cytochrome b5: structure and stability.
J.BIOL.INORG.CHEM., 6, 2001
5E10
DownloadVisualize
BU of 5e10 by Molmil
Crystal Structure of PASTA Domains 1 and 2 of Mycobacterium tuberculosis Protein Kinase B
分子名称: Serine/threonine-protein kinase PknB
著者Prigozhin, D.M, TB Structural Genomics Consortium (TBSGC)
登録日2015-09-29
公開日2016-09-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural and Genetic Analyses of the Mycobacterium tuberculosis Protein Kinase B Sensor Domain Identify a Potential Ligand-binding Site.
J.Biol.Chem., 291, 2016
6NTI
DownloadVisualize
BU of 6nti by Molmil
Neutron/X-ray crystal structure of AAC-VIa bound to kanamycin b
分子名称: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION
著者Cuneo, M.J, Kumar, P.
登録日2019-01-29
公開日2019-09-25
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (2.3 Å), X-RAY DIFFRACTION
主引用文献Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad.
Angew.Chem.Int.Ed.Engl., 58, 2019
1MPU
DownloadVisualize
BU of 1mpu by Molmil
Crystal Structure of the free human NKG2D immunoreceptor
分子名称: NKG2-D type II integral membrane protein, PHOSPHATE ION
著者McFarland, B.J, Kortemme, T, Baker, D, Strong, R.K.
登録日2002-09-12
公開日2003-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Symmetry Recognizing Asymmetry: Analysis of the Interactions between the C-Type Lectin-like Immunoreceptor NKG2D and MHC Class I-like Ligands
Structure, 11, 2003
7JYV
DownloadVisualize
BU of 7jyv by Molmil
Crystal Structure of HLA A*2402 in complex with YFSPIRVTF, an 9-mer influenza epitope
分子名称: Beta-2-microglobulin, MAGNESIUM ION, MHC class I antigen, ...
著者Gras, S, Nguyen, A.T, Szeto, C, Rossjohn, J.
登録日2020-09-01
公開日2021-04-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献CD8 + T cell landscape in Indigenous and non-Indigenous people restricted by influenza mortality-associated HLA-A*24:02 allomorph.
Nat Commun, 12, 2021
5FCG
DownloadVisualize
BU of 5fcg by Molmil
Crystal structure of Bcl-2 in complex with HBx-BH3 motif
分子名称: Apoptosis regulator Bcl-2, Protein X
著者Jiang, T.Y, Liu, M.H, Wu, J.P, Shi, Y.G.
登録日2015-12-15
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical analysis of Bcl-2 interaction with the hepatitis B virus protein HBx
Proc.Natl.Acad.Sci.USA, 2016
5E0Y
DownloadVisualize
BU of 5e0y by Molmil
Crystal Structure of PASTA Domain 4 of Mycobacterium tuberculosis Protein Kinase B
分子名称: Serine/threonine-protein kinase PknB, ZINC ION
著者Prigozhin, D.M, TB Structural Genomics Consortium (TBSGC)
登録日2015-09-29
公開日2016-09-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural and Genetic Analyses of the Mycobacterium tuberculosis Protein Kinase B Sensor Domain Identify a Potential Ligand-binding Site.
J.Biol.Chem., 291, 2016
1MXL
DownloadVisualize
BU of 1mxl by Molmil
STRUCTURE OF CARDIAC TROPONIN C-TROPONIN I COMPLEX
分子名称: CALCIUM ION, PROTEIN (TROPONIN C), PROTEIN (TROPONIN I)
著者Li, M.X, Spyracopoulos, L, Sykes, B.D.
登録日1999-04-22
公開日1999-07-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Binding of cardiac troponin-I147-163 induces a structural opening in human cardiac troponin-C.
Biochemistry, 38, 1999
1KF0
DownloadVisualize
BU of 1kf0 by Molmil
Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG
分子名称: 3-PHOSPHOGLYCERIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Kovari, Z, Flachner, B, Naray-Szabo, G, Vas, M.
登録日2001-11-19
公開日2002-07-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic and thiol-reactivity studies on the complex of pig muscle phosphoglycerate kinase with ATP analogues: correlation between nucleotide binding mode and helix flexibility.
Biochemistry, 41, 2002

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon