Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5BV1
DownloadVisualize
BU of 5bv1 by Molmil
Crystal Structure of a Vps33-Vps16 Complex from Chaetomium thermophilum
分子名称: D-MALATE, Putative vacuolar protein sorting-associated protein, VPS33
著者Baker, R.W, Jeffrey, P.D, Hughson, F.M.
登録日2015-06-04
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
6JGO
DownloadVisualize
BU of 6jgo by Molmil
Crystal structure of barley exohydrolaseI W434H mutant in complex with 4I,4III,4V-S-trithiocellohexaose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-02-14
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
4Q7I
DownloadVisualize
BU of 4q7i by Molmil
Crystal structure of engineered thermostable D-tagatose 3-epimerase PcDTE-Var8
分子名称: D-tagatose 3-epimerase, GLYCEROL, IMIDAZOLE, ...
著者Hee, C.S, Bosshart, A, Schirmer, T.
登録日2014-04-25
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Directed Divergent Evolution of a Thermostable D-Tagatose Epimerase towards Improved Activity for Two Hexose Substrates.
Chembiochem, 16, 2015
6BF3
DownloadVisualize
BU of 6bf3 by Molmil
Solution structure of de novo macrocycle design7.3a
分子名称: QDP(DPR)K(2TL)(DAS)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2018-01-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BE7
DownloadVisualize
BU of 6be7 by Molmil
Solution structure of de novo macrocycle Design8.1
分子名称: DDPT(DPR)(DAR)Q(DGN)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-24
公開日2018-01-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEN
DownloadVisualize
BU of 6ben by Molmil
Solution structure of de novo macrocycle design8.2
分子名称: (DAR)Q(DPR)(DGN)R(DGL)PQ
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, B.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BF5
DownloadVisualize
BU of 6bf5 by Molmil
Solution structure of de novo macrocycle design7.3a
分子名称: QDP(DPR)K(DTH)(DAS)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2018-01-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEO
DownloadVisualize
BU of 6beo by Molmil
Solution structure of de novo macrocycle design9.1
分子名称: (DPR)PY(DHI)PKDL(DGN)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BE9
DownloadVisualize
BU of 6be9 by Molmil
Solution structure of de novo macrocycle design7.1
分子名称: T(DLY)NDT(DSG)(DPR)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, B.
登録日2017-10-24
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
3KO4
DownloadVisualize
BU of 3ko4 by Molmil
Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
著者Manickam, Y, Bhatt, T.K, Sharma, A.
登録日2009-11-13
公開日2009-12-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KP0
DownloadVisualize
BU of 3kp0 by Molmil
Crystal Structure of ORNITHINE 4,5 AMINOMUTASE in complex with 2,4-diaminobutyrate (DAB) (Aerobic)
分子名称: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ...
著者Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D.
登録日2009-11-14
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase.
J.Biol.Chem., 285, 2010
3KOY
DownloadVisualize
BU of 3koy by Molmil
Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Aerobic)
分子名称: (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine, 5'-DEOXYADENOSINE, COBALAMIN, ...
著者Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D.
登録日2009-11-14
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase.
J.Biol.Chem., 285, 2010
6JGB
DownloadVisualize
BU of 6jgb by Molmil
Crystal structure of barley exohydrolaseI W286F mutant in complex with methyl 6-thio-beta-gentiobioside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-02-13
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
6JGQ
DownloadVisualize
BU of 6jgq by Molmil
Crystal structure of barley exohydrolaseI W434Y mutant in complex with methyl 2-thio-beta-sophoroside.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, GLYCEROL, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-02-14
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
6JGE
DownloadVisualize
BU of 6jge by Molmil
Crystal structure of barley exohydrolaseI W434A mutant in complex with methyl 2-thio-beta-sophoroside.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, GLYCEROL, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-02-13
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
5GIW
DownloadVisualize
BU of 5giw by Molmil
Solution NMR structure of Humanin containing a D-isomerized serine residue
分子名称: Humanin
著者Furuita, K, Sugiki, T, Alsanousi, N, Fujiwara, T, Kojima, C.
登録日2016-06-25
公開日2016-07-20
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution NMR structure and inhibitory effect against amyloid-beta fibrillation of Humanin containing a d-isomerized serine residue
Biochem.Biophys.Res.Commun., 477, 2016
7NCC
DownloadVisualize
BU of 7ncc by Molmil
Crystal structure of fructose-bisphosphate aldolase FBAP from Bacillus methanolicus
分子名称: D-MALATE, IMIDAZOLE, PHOSPHATE ION, ...
著者Einsle, O, Zhang, L, Guetle, D, Jacquot, J.P.
登録日2021-01-28
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Interrogating the Role of the Two Distinct Fructose-Bisphosphate Aldolases of Bacillus methanolicus by Site-Directed Mutagenesis of Key Amino Acids and Gene Repression by CRISPR Interference
Front Microbiol, 12, 2021
3KOW
DownloadVisualize
BU of 3kow by Molmil
Crystal Structure of ornithine 4,5 aminomutase backsoaked complex
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, D-ornithine aminomutase E component, ...
著者Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D.
登録日2009-11-14
公開日2010-01-26
最終更新日2012-10-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase.
J.Biol.Chem., 285, 2010
6K6V
DownloadVisualize
BU of 6k6v by Molmil
Crystal structure of barley exohydrolaseI W434A mutant in complex with methyl 6-thio-beta-gentiobioside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-06-05
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
3KOX
DownloadVisualize
BU of 3kox by Molmil
Crystal Structure of ornithine 4,5 aminomutase in complex with 2,4-diaminobutyrate (Anaerobic)
分子名称: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ...
著者Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D.
登録日2009-11-14
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase.
J.Biol.Chem., 285, 2010
6BUG
DownloadVisualize
BU of 6bug by Molmil
Crystal structure of a membrane protein, crystal form I
分子名称: D-alanyl carrier protein, D-alanyl transfer protein DltB
著者Ma, D, Wang, Z, Xu, W.
登録日2017-12-10
公開日2018-10-10
最終更新日2018-10-24
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
4U04
DownloadVisualize
BU of 4u04 by Molmil
Structure of a eukaryotic fic domain containing protein
分子名称: Adenosine monophosphate-protein transferase FICD, D(-)-TARTARIC ACID, TETRAETHYLENE GLYCOL
著者Cole, A.R, Bunney, T.D, Katan, M.
登録日2014-07-11
公開日2014-12-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal structure of the human, FIC-domain containing protein HYPE and implications for its functions.
Structure, 22, 2014
3KOZ
DownloadVisualize
BU of 3koz by Molmil
Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Anaerobic)
分子名称: (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine, 5'-DEOXYADENOSINE, COBALAMIN, ...
著者Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D.
登録日2009-11-14
公開日2010-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase.
J.Biol.Chem., 285, 2010
6JG7
DownloadVisualize
BU of 6jg7 by Molmil
Crystal structure of barley exohydrolaseI W286F in complex with methyl 2-thio-beta-sophoroside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, GLYCEROL, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-02-13
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
6ABJ
DownloadVisualize
BU of 6abj by Molmil
The apo-structure of D-lactate dehydrogenase from Pseudomonas aeruginosa
分子名称: ACETATE ION, D-lactate dehydrogenase (Fermentative)
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2018-07-21
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria
Biochemistry, 57, 2018

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon