Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 29 件
2BG5
DownloadVisualize
BU of 2bg5 by Molmil
Crystal Structure of the Phosphoenolpyruvate-binding Enzyme I-Domain from the Thermoanaerobacter tengcongensis PEP: Sugar Phosphotransferase System (PTS)
分子名称: PHOSPHOENOLPYRUVATE-PROTEIN KINASE
著者Oberholzer, A.E, Bumann, M, Schneider, P, Baechler, C, Siebold, C, Baumann, U, Erni, B.
登録日2004-12-17
公開日2005-02-02
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal Structure of the Phosphoenolpyruvate-Binding Enzyme I-Domain from the Thermoanaerobacter Tengcongensis Pep: Sugar Phosphotransferase System (Pts)
J.Mol.Biol., 346, 2005
6V9K
DownloadVisualize
BU of 6v9k by Molmil
CRYSTAL STRUCTURE OF THE HYBRID C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FORMED BY HYBRIDIZING THE SCAFFOLD OF THE ESCHERICHIA COLI ENZYME WITH THE ACTIVE SITE LOOPS FROM THE THERMOANAEROBACTER TENGCONGENSIS ENZYME
分子名称: MAGNESIUM ION, Phosphoenolpyruvate-protein phosphotransferase
著者Stewart Jr, C.E.
登録日2019-12-13
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Hybrid Thermophilic/Mesophilic Enzymes Reveal a Role for Conformational Disorder in Regulation of Bacterial Enzyme I.
J.Mol.Biol., 432, 2020
6VBJ
DownloadVisualize
BU of 6vbj by Molmil
CRYSTAL STRUCTURE OF THE HYBRID C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FORMED BY HYBRIDIZING THE SCAFFOLD OF THE THERMOANAEROBACTER TENGCONGENSIS ENZYME WITH THE ACTIVE SITE LOOPS FROM THE ESCHERICHIA COLI ENZYME
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Stewart Jr, C.E.
登録日2019-12-19
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hybrid Thermophilic/Mesophilic Enzymes Reveal a Role for Conformational Disorder in Regulation of Bacterial Enzyme I.
J.Mol.Biol., 432, 2020
6VU0
DownloadVisualize
BU of 6vu0 by Molmil
CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FROM THE ESCHERICHIA COLI ENZYME
分子名称: PEP-protein phosphotransferase system enzyme I, SULFATE ION
著者Stewart Jr, C.E.
登録日2020-02-14
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Hybrid Thermophilic/Mesophilic Enzymes Reveal a Role for Conformational Disorder in Regulation of Bacterial Enzyme I.
J.Mol.Biol., 432, 2020
2XZ9
DownloadVisualize
BU of 2xz9 by Molmil
CRYSTAL STRUCTURE FROM THE PHOSPHOENOLPYRUVATE-BINDING DOMAIN OF ENZYME I IN COMPLEX WITH PYRUVATE FROM THE THERMOANAEROBACTER TENGCONGENSIS PEP-SUGAR PHOSPHOTRANSFERASE SYSTEM (PTS)
分子名称: MAGNESIUM ION, PHOSPHOENOLPYRUVATE-PROTEIN KINASE (PTS SYSTEM EI COMPONENT IN BACTERIA), PYRUVIC ACID
著者Oberholzer, A.E, Waltersperger, S.M, Schneider, P, Baumann, U, Erni, B.
登録日2010-11-24
公開日2011-06-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.677 Å)
主引用文献Phosphoenolpyruvate: Sugar Phosphotransferase System from the Hyperthermophilic Thermoanaerobacter Tengcongensis.
Biochemistry, 50, 2011
2XZ7
DownloadVisualize
BU of 2xz7 by Molmil
CRYSTAL STRUCTURE OF THE PHOSPHOENOLPYRUVATE-BINDING DOMAIN OF ENZYME I IN COMPLEX WITH PHOSPHOENOLPYRUVATE FROM THE THERMOANAEROBACTER TENGCONGENSIS PEP-SUGAR PHOSPHOTRANSFERASE SYSTEM (PTS)
分子名称: MAGNESIUM ION, PHOSPHOENOLPYRUVATE, PHOSPHOENOLPYRUVATE-PROTEIN KINASE (PTS SYSTEM EI COMPONENT IN BACTERIA)
著者Waltersperger, S.M, Oberholzer, A.E, Schneider, P, Baumann, U, Erni, B.
登録日2010-11-23
公開日2011-06-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Phosphoenolpyruvate: Sugar Phosphotransferase System from the Hyperthermophilic Thermoanaerobacter Tengcongensis.
Biochemistry, 50, 2011
8A8E
DownloadVisualize
BU of 8a8e by Molmil
PPSA C terminal octahedral structure
分子名称: Phosphoenolpyruvate synthase
著者Song, W.
登録日2022-06-22
公開日2023-07-05
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Survival strategies in the heat Lysine acetylation stabilizes the quaternary structure of a Mega-Dalton hyperthermophilic PEP-synthase
To Be Published
5LU4
DownloadVisualize
BU of 5lu4 by Molmil
C4-type pyruvate phosphate dikinase: conformational intermediate of central domain in the swiveling mechanism
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PYRUVIC ACID, ...
著者Minges, A, Hoeppner, A, Groth, G.
登録日2016-09-08
公開日2017-05-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Trapped intermediate state of plant pyruvate phosphate dikinase indicates substeps in catalytic swiveling domain mechanism.
Protein Sci., 26, 2017
1DIK
DownloadVisualize
BU of 1dik by Molmil
PYRUVATE PHOSPHATE DIKINASE
分子名称: PYRUVATE PHOSPHATE DIKINASE, SULFATE ION
著者Herzberg, O, Chen, C.C.H.
登録日1995-12-06
公開日1996-04-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Swiveling-domain mechanism for enzymatic phosphotransfer between remote reaction sites.
Proc.Natl.Acad.Sci.USA, 93, 1996
1KC7
DownloadVisualize
BU of 1kc7 by Molmil
Pyruvate Phosphate Dikinase with Bound Mg-phosphonopyruvate
分子名称: MAGNESIUM ION, PHOSPHONOPYRUVATE, SULFATE ION, ...
著者Chen, C.C, Howard, A, Herzberg, O.
登録日2001-11-07
公開日2002-01-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
1VBG
DownloadVisualize
BU of 1vbg by Molmil
Pyruvate Phosphate Dikinase from Maize
分子名称: MAGNESIUM ION, SULFATE ION, pyruvate,orthophosphate dikinase
著者Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-26
公開日2005-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion
Biochemistry, 44, 2005
2OLS
DownloadVisualize
BU of 2ols by Molmil
The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis
分子名称: Phosphoenolpyruvate synthase
著者Zhang, R, Duggan, E, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-01-19
公開日2007-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis
To be Published
1VBH
DownloadVisualize
BU of 1vbh by Molmil
Pyruvate Phosphate Dikinase with bound Mg-PEP from Maize
分子名称: MAGNESIUM ION, PHOSPHOENOLPYRUVATE, SULFATE ION, ...
著者Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-26
公開日2005-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion
Biochemistry, 44, 2005
1KBL
DownloadVisualize
BU of 1kbl by Molmil
PYRUVATE PHOSPHATE DIKINASE
分子名称: AMMONIUM ION, PYRUVATE PHOSPHATE DIKINASE, SULFATE ION
著者Herzberg, O, Chen, C.C, Liu, S.
登録日2001-11-06
公開日2002-01-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
2R82
DownloadVisualize
BU of 2r82 by Molmil
Pyruvate phosphate dikinase (PPDK) triple mutant R219E/E271R/S262D adapts a second conformational state
分子名称: Pyruvate, phosphate dikinase, SULFATE ION
著者Lim, K, Read, R.J, Chen, C.C, Herzberg, O.
登録日2007-09-10
公開日2008-01-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Swiveling domain mechanism in pyruvate phosphate dikinase.
Biochemistry, 46, 2007
1GGO
DownloadVisualize
BU of 1ggo by Molmil
T453A MUTANT OF PYRUVATE, PHOSPHATE DIKINASE
分子名称: PROTEIN (PYRUVATE, PHOSPHATE DIKINASE), SULFATE ION
著者Li, Z, Herzberg, O.
登録日2000-08-29
公開日2001-01-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identification of domain-domain docking sites within Clostridium symbiosum pyruvate phosphate dikinase by amino acid replacement.
J.Biol.Chem., 275, 2000
1JDE
DownloadVisualize
BU of 1jde by Molmil
K22A mutant of pyruvate, phosphate dikinase
分子名称: PYRUVATE, PHOSPHATE DIKINASE, SULFATE ION
著者Ye, D, Wei, M, McGuire, M, Huang, K, Kapadia, G, Herzberg, O, Martin, B.M, Dunaway-Mariano, D.
登録日2001-06-13
公開日2001-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Investigation of the catalytic site within the ATP-grasp domain of Clostridium symbiosum pyruvate phosphate dikinase.
J.Biol.Chem., 276, 2001
2KX9
DownloadVisualize
BU of 2kx9 by Molmil
Solution Structure of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Schwieters, C.D, Suh, J, Grishaev, A, Takayama, Y, Guirlando, R, Clore, G.
登録日2010-04-29
公開日2010-09-15
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering.
J.Am.Chem.Soc., 132, 2010
2DIK
DownloadVisualize
BU of 2dik by Molmil
R337A MUTANT OF PYRUVATE PHOSPHATE DIKINASE
分子名称: PROTEIN (PYRUVATE PHOSPHATE DIKINASE), SULFATE ION
著者Huang, K, Herzberg, O.
登録日1998-09-03
公開日1999-09-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Location of the phosphate binding site within Clostridium symbiosum pyruvate phosphate dikinase.
Biochemistry, 37, 1998
5JVJ
DownloadVisualize
BU of 5jvj by Molmil
C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer
分子名称: MAGNESIUM ION, PHOSPHOENOLPYRUVATE, Pyruvate, ...
著者Minges, A, Hoeppner, A, Groth, G.
登録日2016-05-11
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.898 Å)
主引用文献Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Sci Rep, 7, 2017
5JVN
DownloadVisualize
BU of 5jvn by Molmil
C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism
分子名称: 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ...
著者Minges, A, Hoeppner, A, Groth, G.
登録日2016-05-11
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Sci Rep, 7, 2017
2L5H
DownloadVisualize
BU of 2l5h by Molmil
Solution Structure of the H189Q mutant of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Takayama, Y.D, Schwieters, C.D, Grishaev, A, Guirlando, R, Clore, G.
登録日2010-11-01
公開日2011-01-12
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Combined Use of Residual Dipolar Couplings and Solution X-ray Scattering To Rapidly Probe Rigid-Body Conformational Transitions in a Non-phosphorylatable Active-Site Mutant of the 128 kDa Enzyme I Dimer.
J.Am.Chem.Soc., 133, 2011
5JVL
DownloadVisualize
BU of 5jvl by Molmil
C4-type pyruvate phospate dikinase: nucleotide binding domain with bound ATP analogue
分子名称: 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ...
著者Minges, A, Hoeppner, A, Groth, G.
登録日2016-05-11
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Sci Rep, 7, 2017
2N5T
DownloadVisualize
BU of 2n5t by Molmil
Ensemble solution structure of the phosphoenolpyruvate-Enzyme I complex from the bacterial phosphotransferase system
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Venditti, V, Schwieters, C.D, Grishaev, A, Clore, G.
登録日2015-07-28
公開日2015-09-02
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering.
Proc.Natl.Acad.Sci.USA, 112, 2015
2HRO
DownloadVisualize
BU of 2hro by Molmil
Structure of the full-lenght Enzyme I of the PTS system from Staphylococcus carnosus
分子名称: Phosphoenolpyruvate-protein phosphotransferase, SULFATE ION
著者Marquez, J.A, Reinelt, S, Koch, B, Engelman, R, Hengstenberg, W, Scheffzek, K.
登録日2006-07-20
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the full-length enzyme I of the phosphoenolpyruvate-dependent sugar phosphotransferase system
J.Biol.Chem., 281, 2006

 

12>

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon