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PDB: 32 件

5C8A
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BU of 5c8a by Molmil
Crystal structure of a truncated form of Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ...
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
8C76
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BU of 8c76 by Molmil
Light-state 2.5 Angstrom wild-type X-ray crystal structure of the cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic conditions from a form 2 crystal illuminated during 5 s
分子名称: COBALAMIN, Probable transcriptional regulator
著者Rios-Santacruz, R, Colletier, J.P, Schiro, G, Weik, M.
登録日2023-01-12
公開日2023-08-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C73
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BU of 8c73 by Molmil
Dark state 1.8 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic condition form ll
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Probable transcriptional regulator
著者Rios-Santacruz, R, Colletier, J.P, Schiro, G, Weik, M.
登録日2023-01-12
公開日2023-08-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C37
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BU of 8c37 by Molmil
An intermediate light exposed 2.15 Angstrom crystal structure of H132A variant of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under anaerobic conditions
分子名称: COBALAMIN, Probable transcriptional regulator
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C36
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BU of 8c36 by Molmil
Light-adapted 2.0 Angstrom crystal structure of H132A variant of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic conditions
分子名称: COBALAMIN, Probable transcriptional regulator
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C33
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BU of 8c33 by Molmil
Anaerobic light exposed 2.25 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
分子名称: BROMIDE ION, COBALAMIN, Probable transcriptional regulator
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C34
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BU of 8c34 by Molmil
Aerobic light exposed 1.8 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
分子名称: COBALAMIN, DI(HYDROXYETHYL)ETHER, Probable transcriptional regulator, ...
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C35
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BU of 8c35 by Molmil
Dark state 2.1 Angstrom crystal structure of H132A variant of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Probable transcriptional regulator
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C31
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BU of 8c31 by Molmil
Dark state 1.8 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic condition
分子名称: 1,2-ETHANEDIOL, 5'-DEOXYADENOSINE, BROMIDE ION, ...
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
8C32
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BU of 8c32 by Molmil
Dark state 2.2 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under anaerobic condition
分子名称: 5'-DEOXYADENOSINE, BROMIDE ION, COBALAMIN, ...
著者Poddar, H, Leys, D.
登録日2022-12-23
公開日2023-08-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
3WHP
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BU of 3whp by Molmil
Crystal structure of the C-terminal domain of Themus thermophilus LitR in complex with cobalamin
分子名称: COBALAMIN, Probable transcriptional regulator
著者Agari, Y, Takano, H, Beppu, T, Ueda, K, Shinkai, A.
登録日2013-08-30
公開日2014-09-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Crystal structure of the C-terminal domain of Themus thermophilus LitR in complex with cobalamin
To be Published
5C8E
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BU of 5c8e by Molmil
Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
分子名称: 26-mer DNA segment containing the CarH operator sequence (antisense strand), 26-mer DNA segment containing the CarH operator sequence (sense strand), 5'-DEOXYADENOSINE, ...
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.89 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5C8D
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BU of 5c8d by Molmil
Crystal structure of full-length Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Light-dependent transcriptional regulator CarH
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5C8F
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BU of 5c8f by Molmil
Crystal structure of light-exposed full-length Thermus thermophilus CarH bound to cobalamin
分子名称: CHLORIDE ION, COBALAMIN, GLYCEROL, ...
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
8G3H
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BU of 8g3h by Molmil
Structure of cobalamin-dependent methionine synthase (MetH) in a resting state
分子名称: COBALAMIN, Methionine synthase, ZINC ION
著者Watkins, M.B, Ando, N.
登録日2023-02-07
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Conformational switching and flexibility in cobalamin-dependent methionine synthase studied by small-angle X-ray scattering and cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 120, 2023
4JGI
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BU of 4jgi by Molmil
1.5 Angstrom crystal structure of a novel cobalamin-binding protein from Desulfitobacterium hafniense DCB-2
分子名称: CO-METHYLCOBALAMIN, Putative uncharacterized protein
著者Sjuts, H, Dunstan, M.S, Fisher, K, Leys, D.
登録日2013-03-01
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the cobalamin-binding protein of a putative O-demethylase from Desulfitobacterium hafniense DCB-2.
Acta Crystallogr.,Sect.D, 69, 2013
3EZX
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BU of 3ezx by Molmil
Structure of Methanosarcina barkeri monomethylamine corrinoid protein
分子名称: 5-HYDROXYBENZIMIDAZOLYLCOBAMIDE, MAGNESIUM ION, Monomethylamine corrinoid protein 1
著者Jain, R.
登録日2008-10-23
公開日2009-12-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structure of Methanosarcina barkeri monomethylamine corrinoid protein
TO BE PUBLISHED
7XCN
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BU of 7xcn by Molmil
Crystal structure of the MttB-MttC complex at 2.7 A resolution
分子名称: 5-HYDROXYBENZIMIDAZOLYLCOBAMIDE, GLYCEROL, Trimethylamine methyltransferase, ...
著者Li, J, Chan, M.K.
登録日2022-03-24
公開日2023-01-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Insights into pyrrolysine function from structures of a trimethylamine methyltransferase and its corrinoid protein complex.
Commun Biol, 6, 2023
2I2X
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BU of 2i2x by Molmil
Crystal structure of methanol:cobalamin methyltransferase complex MtaBC from Methanosarcina barkeri
分子名称: 5-HYDROXYBENZIMIDAZOLYLCOB(III)AMIDE, Methyltransferase 1, POTASSIUM ION, ...
著者Hagemeier, C.H, Kruer, M, Thauer, R.K, Warkentin, E, Ermler, U.
登録日2006-08-17
公開日2006-11-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex
Proc.Natl.Acad.Sci.Usa, 103, 2006
1Y80
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BU of 1y80 by Molmil
Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica
分子名称: CO-5-METHOXYBENZIMIDAZOLYLCOBAMIDE, Predicted cobalamin binding protein, UNKNOWN ATOM OR ION
著者Liu, Z.-J, Fu, Z.-Q, Tempel, W, Das, A, Habel, J, Zhou, W, Chang, J, Chen, L, Lee, D, Nguyen, D, Chang, S.-H, Ljungdahl, L, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-12-10
公開日2005-01-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica
To be published
3BUL
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BU of 3bul by Molmil
E. coli I690C/G743C MetH C-terminal fragment (649-1227)
分子名称: COBALAMIN, Methionine synthase
著者Koutmos, M, Pattridge, K.A, Ludwig, M.L.
登録日2008-01-03
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A disulfide-stabilized conformer of methionine synthase reveals an unexpected role for the histidine ligand of the cobalamin cofactor.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1BMT
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BU of 1bmt by Molmil
HOW A PROTEIN BINDS B12: A 3.O ANGSTROM X-RAY STRUCTURE OF THE B12-BINDING DOMAINS OF METHIONINE SYNTHASE
分子名称: CO-METHYLCOBALAMIN, METHIONINE SYNTHASE
著者Drennan, C.L, Huang, S, Drummond, J.T, Matthews, R.G, Ludwig, M.L.
登録日1994-09-02
公開日1995-06-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase.
Science, 266, 1994
1K98
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BU of 1k98 by Molmil
AdoMet complex of MetH C-terminal fragment
分子名称: COBALAMIN, Methionine synthase, SULFATE ION
著者Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
登録日2001-10-27
公開日2001-12-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002
3IV9
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BU of 3iv9 by Molmil
Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half in a "His-On" conformation
分子名称: COBALAMIN, Methionine synthase
著者Pattridge, K.A, Koutmos, M, Smith, J.L.
登録日2009-08-31
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Insights into the reactivation of cobalamin-dependent methionine synthase.
Proc.Natl.Acad.Sci.USA, 106, 2009
1K7Y
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BU of 1k7y by Molmil
E. coli MetH C-terminal fragment (649-1227)
分子名称: COBALAMIN, SULFATE ION, methionine synthase
著者Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
登録日2001-10-22
公開日2001-12-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002

 

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