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PDB: 160 件
5FQ8
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BU of 5fq8 by Molmil
Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-decanoyloxypropyl decanoate, BT_2262 (UNCHARACTERISED LIPOPROTEIN), ...
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-07
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5FQ6
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BU of 5fq6 by Molmil
Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron
分子名称: 3-decanoyloxypropyl decanoate, BT_2261, CALCIUM ION, ...
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-07
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5FQ7
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BU of 5fq7 by Molmil
Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron
分子名称: BT_2261, BT_2262, BT_2263, ...
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-07
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5FQ4
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BU of 5fq4 by Molmil
Crystal structure of the lipoprotein BT2263 from Bacteroides thetaiotaomicron
分子名称: CALCIUM ION, PUTATIVE LIPOPROTEIN
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-04
公開日2016-12-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5FQ3
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BU of 5fq3 by Molmil
Crystal structure of the lipoprotein BT2262 from Bacteroides thetaiotaomicron
分子名称: BT_2262
著者Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B.
登録日2015-12-04
公開日2016-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5YQW
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BU of 5yqw by Molmil
Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, ...
著者Suginta, W, Sritho, N, Ranok, A, Kitaoku, Y, Bulmer, D.M, van den Berg, B, Fukamizo, T.
登録日2017-11-08
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marineVibriobacteria.
J. Biol. Chem., 293, 2018
7VU1
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Chitoporin from Escherichia coli complex with chitohexaose
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitoporin, ...
著者Suginta, W, Soysa, H.S.M, Amornloetwattana, R, van den Berg, B.
登録日2021-11-01
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Chitporin from Escherichia coli complex with chitohexaose
To Be Published
6ZLT
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BU of 6zlt by Molmil
Open-open state of the Bt1762-Bt1763 levan transport system
分子名称: SusC homolog, SusD homolog
著者White, J.B.R, van den Berg, B, Ranson, N.A.
登録日2020-07-01
公開日2020-11-11
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
7BIZ
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BU of 7biz by Molmil
Structure of a B12 binding lipoprotein from Bacteroides thetaiotaomicron
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CYANOCOBALAMIN, ...
著者Abellon-Ruiz, J, van den Berg, B.
登録日2021-01-13
公開日2022-03-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Gut Commensal Bacteroidetes Encode a Novel Class of Vitamin B 12 -Binding Proteins.
Mbio, 13, 2022
5AF1
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Crystal structure of Candida albicans Mep2
分子名称: MEP2
著者Rutherford, J.C, Chembath, A, van den Berg, B.
登録日2015-01-14
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.639 Å)
主引用文献Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5AEZ
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BU of 5aez by Molmil
Crystal structure of Candida albicans Mep2
分子名称: MEP2, nonyl beta-D-glucopyranoside
著者Rutherford, J.C, Chembath, A, van den Berg, B.
登録日2015-01-12
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5AEX
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BU of 5aex by Molmil
Crystal structure of Saccharomyces cerevisiae Mep2
分子名称: AMMONIUM TRANSPORTER MEP2, PHOSPHATE ION
著者Rutherford, J.C, Chembath, A, van den Berg, B.
登録日2015-01-12
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
8A8C
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BU of 8a8c by Molmil
T5 phage receptor-binding protein pb5 bound to ferrichrome transporter FhuA
分子名称: Ferrichrome outer membrane transporter/phage receptor, Receptor-binding protein pb5, [(2R,3S,4R,5R,6R)-2-[[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-4-[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-2-carboxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-carboxy-5-oxidanyl-oxan-2-yl]oxymethyl]-5-[[(3R)-3-dodecanoyloxytetradecanoyl]amino]-4-(3-nonanoyloxypropanoyloxy)-6-[[(2R,3S,4R,5R,6R)-3-oxidanyl-4-[(3S)-3-oxidanyltetradecanoyl]oxy-5-[[(3R)-3-oxidanyltridecanoyl]amino]-6-phosphonatooxy-oxan-2-yl]methoxy]oxan-3-yl] phosphate
著者Silale, A, van den Berg, B.
登録日2022-06-22
公開日2022-10-05
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for host recognition and superinfection exclusion by bacteriophage T5.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VU3
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BU of 7vu3 by Molmil
Chitoporin from Serratia marcescens in-complex with chitohexaose
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Amornloetwattana, R, Robinson, R.C, van den Berg, B, Suginta, W.
登録日2021-11-01
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Chitoporin from Serratia marcescens in-complex with chitohexaose
To Be Published
7VU2
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BU of 7vu2 by Molmil
Chitoporin from Serratia marcescens
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Amornloetwattana, R, Robinson, R.C, van den Berg, B, Suginta, W.
登録日2021-11-01
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Chitoporin from Serratia marcescens
To Be Published
7VU0
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BU of 7vu0 by Molmil
Chitoporin from Escherichia coli
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Chitoporin, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Suginta, W, Soysa, H.S.M, Amornloetwattana, R, van den Berg, B.
登録日2021-11-01
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Chitoporin from Escherichia coli
To Be Published
6K35
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BU of 6k35 by Molmil
Crystal structure of GH20 exo beta-N-acetylglucosaminidase from Vibrio harveyi in complex with NAG-thiazoline
分子名称: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, Beta-N-acetylglucosaminidase Nag2
著者Meekrathok, P, Stubbs, K.A, Bulmer, D.M, van den Berg, B, Suginta, W.
登録日2019-05-16
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献NAG-thiazoline is a potent inhibitor of the Vibrio campbellii GH20 beta-N-Acetylglucosaminidase.
Febs J., 287, 2020
5NUO
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BU of 5nuo by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ABC transporter permease, Outer membrane protein F, ...
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5NUP
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BU of 5nup by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ABC transporter permease, DODECYL-BETA-D-MALTOSIDE, ...
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5NUQ
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BU of 5nuq by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein F, Probable phospholipid-binding lipoprotein mlaA
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5NUR
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BU of 5nur by Molmil
Structural basis for maintenance of bacterial outer membrane lipid asymmetry
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(3-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, ...
著者Abellon-Ruiz, J, Kaptan, S.S, Basle, A, Claudi, B, Bumann, D, Kleinekathofer, U, van den Berg, B.
登録日2017-05-01
公開日2017-10-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structural basis for maintenance of bacterial outer membrane lipid asymmetry.
Nat Microbiol, 2, 2017
5MDP
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BU of 5mdp by Molmil
Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form II)
分子名称: Chitoporin
著者Zahn, M, van den Berg, B.
登録日2016-11-13
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
5MDS
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BU of 5mds by Molmil
Crystal structure of outer membrane expressed Chitoporin VhChip from Vibrio harveyi in complex with chitotetraose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitoporin
著者Zahn, M, van den Berg, B.
登録日2016-11-13
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
5MDO
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BU of 5mdo by Molmil
Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form I)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Chitoporin, SODIUM ION
著者Zahn, M, van den Berg, B.
登録日2016-11-13
公開日2017-12-20
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
5MDQ
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BU of 5mdq by Molmil
Crystal structure of outer membrane expressed Chitoporin VhChip from Vibrio harveyi
分子名称: Chitoporin, SODIUM ION
著者Zahn, M, van den Berg, B.
登録日2016-11-13
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018

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