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PDB: 30 件

2VYR
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BU of 2vyr by Molmil
Structure of human MDM4 N-terminal domain bound to a single domain antibody
分子名称: HUMAN SINGLE DOMAIN ANTIBODY, MDM4 PROTEIN, SULFATE ION
著者Yu, G.W, Vaysburd, M, Allen, M.D, Settanni, G, Fersht, A.R.
登録日2008-07-28
公開日2008-11-25
最終更新日2013-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Human Mdm4 N-Terminal Domain Bound to a Single-Domain Antibody.
J.Mol.Biol., 385, 2009
7K57
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BU of 7k57 by Molmil
Structure of apo VCP dodecamer generated from bacterially recombinant VCP/p97
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2022-04-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
7K56
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BU of 7k56 by Molmil
Structure of VCP dodecamer purified from H1299 cells
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2022-04-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
7K59
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BU of 7k59 by Molmil
Structure of apo VCP hexamer generated from bacterially recombinant VCP/p97
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2022-04-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
8H2T
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BU of 8h2t by Molmil
Cryo-EM structure of IadD/E dioxygenase bound with IAA
分子名称: 1H-INDOL-3-YLACETIC ACID, Aromatic-ring-hydroxylating dioxygenase beta subunit, FE (III) ION, ...
著者Yu, G, Li, Z, Zhang, H.
登録日2022-10-07
公開日2023-06-14
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Structural and biochemical characterization of the key components of an auxin degradation operon from the rhizosphere bacterium Variovorax.
Plos Biol., 21, 2023
2C6A
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BU of 2c6a by Molmil
Solution structure of the C4 zinc-finger domain of HDM2
分子名称: UBIQUITIN-PROTEIN LIGASE E3 MDM2, ZINC ION
著者Yu, G.W, Allen, M.D, Andreeva, A, Fersht, A.R, Bycroft, M.
登録日2005-11-08
公開日2006-01-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the C4 Zinc Finger Domain of Hdm2.
Protein Sci., 15, 2006
2C6B
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BU of 2c6b by Molmil
Solution structure of the C4 zinc-finger domain of HDM2
分子名称: UBIQUITIN-PROTEIN LIGASE E3 MDM2, ZINC ION
著者Yu, G.W, Allen, M.D, Andreeva, A, Fersht, A.R, Bycroft, M.
登録日2005-11-08
公開日2006-01-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the C4 Zinc Finger Domain of Hdm2.
Protein Sci., 15, 2006
7DJJ
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BU of 7djj by Molmil
Structure of four truncated and mutated forms of quenching protein lumenal domains
分子名称: Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, SODIUM ION, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.69806433 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7DJM
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BU of 7djm by Molmil
Structure of four truncated and mutated forms of quenching protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ACETATE ION, Protein SUPPRESSOR OF QUENCHING 1, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.70000112 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7DJL
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BU of 7djl by Molmil
Structure of four truncated and mutated forms of quenching protein
分子名称: CHLORIDE ION, Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.96077824 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
7DJK
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BU of 7djk by Molmil
Structure of four truncated and mutated forms of quenching protein
分子名称: CHLORIDE ION, Protein SUPPRESSOR OF QUENCHING 1, chloroplastic, ...
著者Yu, G.M, Pan, X.W, Li, M.
登録日2020-11-20
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.80145121 Å)
主引用文献Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH.
Nat.Plants, 8, 2022
8GNA
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BU of 8gna by Molmil
Structure of the SbCas7-11-crRNA-NTR complex
分子名称: RAMP superfamily protein, RNA (32-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*GP*U)-3'), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-08-23
公開日2023-01-18
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Target RNA-guided protease activity in type III-E CRISPR-Cas system.
Nucleic Acids Res., 50, 2022
8GU6
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BU of 8gu6 by Molmil
Structure of the SbCas7-11-crRNA-NTR-Csx29 complex
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-09-10
公開日2023-01-18
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Target RNA-guided protease activity in type III-E CRISPR-Cas system.
Nucleic Acids Res., 50, 2022
7X7R
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BU of 7x7r by Molmil
Cryo-EM structure of a bacterial protein
分子名称: RAMP superfamily protein, RNA (36-MER), RNA (5'-R(P*AP*GP*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3'), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-10
公開日2022-11-16
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7XC7
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BU of 7xc7 by Molmil
Cryo-EM structure of a bacterial protein complex
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-23
公開日2022-11-16
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7X8A
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BU of 7x8a by Molmil
Cryo-EM structure of a bacterial protein complex
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-11
公開日2022-11-16
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7X7A
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BU of 7x7a by Molmil
Cryo-EM structure of SbCas7-11 in complex with crRNA and target RNA
分子名称: RAMP superfamily protein, RNA (33-MER), ZINC ION
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-03-09
公開日2022-11-16
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex.
Nat Microbiol, 7, 2022
7E5W
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BU of 7e5w by Molmil
The structure of CcpA from Staphylococcus aureus
分子名称: Catabolite control protein A, SULFATE ION
著者Yu, G, Wei, X.
登録日2021-02-20
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Regulation of DNA-binding activity of the Staphylococcus aureus catabolite control protein A by copper (II)-mediated oxidation.
J.Biol.Chem., 298, 2022
8WOY
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BU of 8woy by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 RBD in complex with rabbit ACE2 (local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, Spike protein S1, ...
著者Li, L.J, Shi, K.Y, Yu, G.H, Gao, G.F.
登録日2023-10-08
公開日2023-12-13
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural basis of increased binding affinities of spikes from SARS-CoV-2 Omicron variants to rabbit and hare ACE2s reveals the expanding host tendency.
Mbio, 15, 2024
8WOX
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BU of 8wox by Molmil
Cryo-EM structure of SARS-CoV-2 prototype RBD in complex with rabbit ACE2 (local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, Spike protein S1, ...
著者Li, L.J, Shi, K.Y, Yu, G.H, Gao, G.F.
登録日2023-10-08
公開日2023-12-13
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Structural basis of increased binding affinities of spikes from SARS-CoV-2 Omicron variants to rabbit and hare ACE2s reveals the expanding host tendency.
Mbio, 15, 2024
8WOZ
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BU of 8woz by Molmil
Cryo-EM structure of SARS-CoV RBD in complex with rabbit ACE2
分子名称: Angiotensin-converting enzyme, Spike protein S1, ZINC ION
著者Li, L.J, Shi, K.Y, Yu, G.H, Gao, G.F.
登録日2023-10-08
公開日2023-12-13
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural basis of increased binding affinities of spikes from SARS-CoV-2 Omicron variants to rabbit and hare ACE2s reveals the expanding host tendency.
Mbio, 15, 2024
8I87
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BU of 8i87 by Molmil
Cryo-EM structure of TIR-APAZ/Ago-gRNA-DNA complex
分子名称: DNA (5'-D(P*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*A)-3'), MAGNESIUM ION, Piwi domain-containing protein, ...
著者Zhang, H, Deng, Z.Q, Yu, G.M, Li, X.Z, Wang, X.S.
登録日2023-02-03
公開日2023-07-19
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Cell Res., 33, 2023
4E8C
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BU of 4e8c by Molmil
Crystal structure of streptococcal beta-galactosidase in complex with galactose
分子名称: GLYCEROL, Glycosyl hydrolase, family 35, ...
著者Cheng, W, Wang, L, Bai, X.H, Jiang, Y.L, Li, Q, Yu, G, Zhou, C.Z, Chen, Y.X.
登録日2012-03-20
公開日2012-05-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural insights into the substrate specificity of Streptococcus pneumoniae beta (1,3)-galactosidase BgaC
J.Biol.Chem., 287, 2012
4E8D
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BU of 4e8d by Molmil
Crystal structure of streptococcal beta-galactosidase
分子名称: GLYCEROL, Glycosyl hydrolase, family 35
著者Cheng, W, Wang, L, Bai, X.H, Jiang, Y.L, Li, Q, Yu, G, Zhou, C.Z, Chen, Y.X.
登録日2012-03-20
公開日2012-05-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the substrate specificity of Streptococcus pneumoniae beta (1,3)-galactosidase BgaC
J.Biol.Chem., 287, 2012
8IN8
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BU of 8in8 by Molmil
Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex
分子名称: DNA (5'-D(P*AP*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*A)-3'), MAGNESIUM ION, Piwi domain protein, ...
著者Zhang, H, Li, Z, Yu, G.M, Li, X.Z, Wang, X.S.
登録日2023-03-08
公開日2023-07-05
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Cell Res., 33, 2023

 

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