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PDB: 139 件
3M0V
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BU of 3m0v by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329L in complex with L-rhamnose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Takeda, K, Izumori, K, Kamitori, S.
登録日2010-03-03
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Elucidation of the role of Ser329 and the C-terminal region in the catalytic activity of Pseudomonas stutzeri L-rhamnose isomerase
Protein Eng.Des.Sel., 23, 2010
3M0H
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BU of 3m0h by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329F in complex with L-rhamnose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Takeda, K, Izumori, K, Kamitori, S.
登録日2010-03-03
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Elucidation of the role of Ser329 and the C-terminal region in the catalytic activity of Pseudomonas stutzeri L-rhamnose isomerase
Protein Eng.Des.Sel., 23, 2010
6M73
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BU of 6m73 by Molmil
Crystal structure of Enterococcus hirae L-lactate oxidase in complex with D-lactate form ligand
分子名称: 1,2-ETHANEDIOL, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Yoshida, H, Hiraka, K, Tsugawa, W, Sode, K.
登録日2020-03-16
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of lactate oxidase from Enterococcus hirae revealed new aspects of active site loop function: Product-inhibition mechanism and oxygen gatekeeper
Protein Sci., 31, 2022
6M74
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BU of 6m74 by Molmil
Crystal structure of Enterococcus hirae L-lactate oxidase M207L in complex with D-lactate form ligand
分子名称: 1,2-ETHANEDIOL, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Yoshida, H, Hiraka, K, Tsugawa, W, Sode, K.
登録日2020-03-16
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structure of lactate oxidase from Enterococcus hirae revealed new aspects of active site loop function: Product-inhibition mechanism and oxygen gatekeeper
Protein Sci., 31, 2022
3ITY
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BU of 3ity by Molmil
Metal-free form of Pseudomonas stutzeri L-rhamnose isomerase
分子名称: L-rhamnose isomerase
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3ITO
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BU of 3ito by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant D327N in complex with D-psicose
分子名称: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-psicofuranose
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3ITT
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BU of 3itt by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329K in complex with L-rhamnose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3ITX
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Mn2+ bound form of Pseudomonas stutzeri L-rhamnose isomerase
分子名称: L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3IUD
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BU of 3iud by Molmil
Cu2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase
分子名称: COPPER (II) ION, L-rhamnose isomerase
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-31
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3ITL
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BU of 3itl by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant D327N in complex with L-rhamnulose
分子名称: 6-deoxy-beta-L-fructofuranose, L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3IUI
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BU of 3iui by Molmil
Zn2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase
分子名称: L-rhamnose isomerase, ZINC ION
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-31
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3ITV
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BU of 3itv by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329K in complex with D-psicose
分子名称: D-psicose, L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3IUH
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BU of 3iuh by Molmil
Co2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase
分子名称: COBALT (II) ION, L-rhamnose isomerase
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-31
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
3NV2
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BU of 3nv2 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with N-acetyllactosamine
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV3
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BU of 3nv3 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with biantennary oligosaccharide
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV4
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Crystal structure of human galectin-9 C-terminal CRD in complex with Sialyllactose
分子名称: Galectin 9 short isoform variant, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, NICKEL (II) ION
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV1
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BU of 3nv1 by Molmil
Crystal structure of human galectin-9 C-terminal CRD
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
2OHD
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BU of 2ohd by Molmil
Crystal structure of hypothetical molybdenum cofactor biosynthesis protein C from Sulfolobus tokodaii
分子名称: Probable molybdenum cofactor biosynthesis protein C
著者Yoshida, H, Yamada, M, Kuramitsu, S, Kamitori, S.
登録日2007-01-10
公開日2007-11-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a putative molybdenum-cofactor biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472)
Acta Crystallogr.,Sect.F, 64, 2008
2QUL
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BU of 2qul by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii at 1.79 A resolution
分子名称: D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-08-06
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUN
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BU of 2qun by Molmil
Crystal Structure of D-tagatose 3-epimerase from Pseudomonas cichorii in Complex with D-fructose
分子名称: D-fructose, D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-08-06
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2OU4
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BU of 2ou4 by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii
分子名称: D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-02-09
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUM
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BU of 2qum by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii with D-tagatose
分子名称: D-tagatose, D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-08-06
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
4FQZ
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BU of 4fqz by Molmil
Crystal structure of a protease-resistant mutant form of human galectin-8
分子名称: 1,2-ETHANEDIOL, Galectin-8, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Yoshida, H, Kamitori, S.
登録日2012-06-26
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
4YTT
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BU of 4ytt by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 6-deoxy L-psicose
分子名称: 6-deoxy-L-psicose, 6-deoxy-alpha-L-psicofuranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
4YTU
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Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with L-erythrulose
分子名称: D-tagatose 3-epimerase, L-Erythrulose, MANGANESE (II) ION
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016

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