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PDB: 317 件

1WU7
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Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum
分子名称: Histidyl-tRNA synthetase
著者Tanaka, Y, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I.
登録日2004-12-01
公開日2005-12-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum
To be Published
1WJ9
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Crystal structure of a CRISPR-associated protein from thermus thermophilus
分子名称: CRISPR-associated protein
著者Ebihara, A, Yao, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain
Protein Sci., 15, 2006
1WSC
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Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
分子名称: Hypothetical protein ST0229
著者Murayama, T, Tanaka, Y, Sasaki, T, Yasutake, Y, Yao, M, Tsumoto, K, Tanaka, I, Kumagai, I.
登録日2004-11-05
公開日2005-11-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
To be Published
1WJG
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Crystal structure of a probable ATP binding protein from thermus themophilus HB8
分子名称: probable ATP binding protein
著者Iino, H, Yao, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a probable atp binding protein from thermus themophilus HB8
To be Published
1WOZ
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Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii
分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 177aa long conserved hypothetical protein (ST1454)
著者Sasaki, T, Tanaka, Y, Yasutake, Y, Yao, M, Tanaka, I, Tsumoto, K, Kumagai, I.
登録日2004-08-27
公開日2005-10-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii.
To be Published
1QQY
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X-RAY CRYSTAL STRUCTURE ANALYSIS OF CANINE MILK LYSOZYME (APO-TYPE)
分子名称: LYSOZYME C
著者Koshiba, T, Yao, M, Tanaka, I, Nitta, K.
登録日1999-06-09
公開日2000-06-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and thermodynamics of the extraordinarily stable molten globule state of canine milk lysozyme.
Biochemistry, 39, 2000
2CWI
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BU of 2cwi by Molmil
X-ray crystal structure analysis of recombinant wild-type canine milk lysozyme (apo-type)
分子名称: Lysozyme C, milk isozyme, SULFATE ION
著者Akieda, D, Yasui, M, Aizawa, T, Yao, M, Watanabe, N, Tanaka, I, Demura, M, Kawano, K, Nitta, K.
登録日2005-06-20
公開日2006-06-20
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.941 Å)
主引用文献Construction of an expression system of canine milk lysozyme in the methylotrophic yeast Pichia pastoris
To be Published
1UMJ
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Crystal structure of Pyrococcus horikoshii CutA in the presence of 3M guanidine hydrochloride
分子名称: GUANIDINE, periplasmic divalent cation tolerance protein CutA
著者Tanaka, Y, Tsumoto, K, Yasutake, Y, Sakai, N, Yao, M, Tanaka, I, Kumagai, I.
登録日2003-10-02
公開日2004-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural evidence for guanidine-protein side chain interactions: crystal structure of CutA from Pyrococcus horikoshii in 3M guanidine hydrochloride
Biochem.Biophys.Res.Commun., 323, 2004
5XFM
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Crystal structure of beta-arabinopyranosidase
分子名称: Alpha-glucosidase, CALCIUM ION
著者Kato, K, Okuyama, M, Yao, M.
登録日2017-04-10
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A novel glycoside hydrolase family 97 enzyme: Bifunctional beta-l-arabinopyranosidase/ alpha-galactosidase from Bacteroides thetaiotaomicron.
Biochimie, 142, 2017
5Z3C
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BU of 5z3c by Molmil
Glycosidase E178A
分子名称: GLYCEROL, Glycoside hydrolase 15-related protein
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2018-01-05
公開日2019-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
5Z3D
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Glycosidase F290Y
分子名称: CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2018-01-05
公開日2019-05-15
最終更新日2022-02-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
5Z3B
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BU of 5z3b by Molmil
Glycosidase Y48F
分子名称: CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2018-01-05
公開日2019-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
2OCC
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BU of 2occ by Molmil
BOVINE HEART CYTOCHROME C OXIDASE AT THE FULLY OXIDIZED STATE
分子名称: COPPER (II) ION, CYTOCHROME C OXIDASE, HEME-A, ...
著者Tsukihara, T, Yao, M.
登録日1998-05-26
公開日1999-01-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase.
Science, 280, 1998
2E7D
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Crystal structure of a NEAT domain from Staphylococcus aureus
分子名称: ACETATE ION, GLYCEROL, Hypothetical protein IsdH, ...
著者Suenaga, A, Tanaka, Y, Yao, M, Kumagai, I, Tanaka, I, Tsumoto, K.
登録日2007-01-09
公開日2008-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for multimeric heme complexation through a specific protein-heme interaction: the case of the third neat domain of IsdH from Staphylococcus aureus
J.Biol.Chem., 283, 2008
5Z3A
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BU of 5z3a by Molmil
Glycosidase Wild Type
分子名称: CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2018-01-05
公開日2019-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
5Z3E
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BU of 5z3e by Molmil
Glycosidase E335A
分子名称: CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2018-01-05
公開日2019-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
5Z3F
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BU of 5z3f by Molmil
Glycosidase E335A in complex with glucose
分子名称: CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein, ...
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2018-01-05
公開日2019-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
2D73
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BU of 2d73 by Molmil
Crystal Structure Analysis of SusB
分子名称: CALCIUM ION, alpha-glucosidase SusB
著者Kitamura, M, Yao, M.
登録日2005-11-15
公開日2007-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
8YIF
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Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarviosin
分子名称: Acarviosin, Alpha-glucosidase
著者Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H.
登録日2024-02-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
2G5H
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Structure of tRNA-Dependent Amidotransferase GatCAB
分子名称: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit A, ...
著者Nakamura, A, Yao, M, Tanaka, I.
登録日2006-02-23
公開日2006-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
8YIE
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Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase
著者Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H.
登録日2024-02-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
2G5I
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Structure of tRNA-Dependent Amidotransferase GatCAB complexed with ADP-AlF4
分子名称: ADENOSINE-5'-DIPHOSPHATE, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, ...
著者Nakamura, A, Yao, M, Tanaka, I.
登録日2006-02-23
公開日2006-07-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
5X3I
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Kfla1895 D451A mutant
分子名称: GLYCEROL, Glycoside hydrolase family 31, SULFATE ION
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2017-02-06
公開日2018-02-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Glycoside hydrolase mutant
To Be Published
5X6C
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Crystal structure of SepRS-SepCysE from Methanocaldococcus jannaschii
分子名称: ADENOSINE-5'-TRIPHOSPHATE, O-phosphoserine--tRNA(Cys) ligase, SULFATE ION, ...
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
5X3J
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Kfla1895 D451A mutant in complex with cyclobis-(1->6)-alpha-nigerosyl
分子名称: Cyclic alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose, GLYCEROL, Glycoside hydrolase family 31, ...
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2017-02-06
公開日2018-02-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Glycoside hydrolase mutant in complex with substrate
To Be Published

224004

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