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PDB: 434 results

7M88
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BU of 7m88 by Molmil
Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 300 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7Q
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BU of 7m7q by Molmil
Human DNA Pol eta S113A with dT-ended primer and dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M81
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BU of 7m81 by Molmil
Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 100 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M82
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BU of 7m82 by Molmil
Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 300 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7S
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BU of 7m7s by Molmil
Human DNA Pol eta S113A with dT-ended primer and 0.1 mM dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M89
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BU of 7m89 by Molmil
Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 0 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7N
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BU of 7m7n by Molmil
Human DNA Pol eta with 2'-FA-ended primer and dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*(AF5))-3'), DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7T
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BU of 7m7t by Molmil
Human DNA Pol eta S113A with dT-ended primer and dATP: in crystallo reaction for 0 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7M
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BU of 7m7m by Molmil
Human DNA Pol eta with rA-ended primer and dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7Y
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BU of 7m7y by Molmil
Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 0 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*A)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7Z
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BU of 7m7z by Molmil
Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 40 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M8B
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BU of 7m8b by Molmil
Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 140 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M8D
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BU of 7m8d by Molmil
Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 300 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M83
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BU of 7m83 by Molmil
Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 0 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*A)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7O
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BU of 7m7o by Molmil
Human DNA Pol eta with dT-ended primer and 0.1 mM dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M80
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BU of 7m80 by Molmil
Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 100 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7L
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BU of 7m7l by Molmil
Human DNA Pol eta with dA-ended primer and dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7U
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BU of 7m7u by Molmil
Human DNA Pol eta S113A with dT-ended primer and dATP: in crystallo reaction for 480s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M8A
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BU of 7m8a by Molmil
Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 40 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M7P
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BU of 7m7p by Molmil
Human DNA Pol eta S113A with dA-ended primer and dAMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*A)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M84
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BU of 7m84 by Molmil
Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 40 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*A)-3'), ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M86
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BU of 7m86 by Molmil
Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 140 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
7M8C
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BU of 7m8c by Molmil
Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 230 s
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ...
Authors:Gregory, M.T, Gao, Y, Yang, W.
Deposit date:2021-03-29
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction.
Proc.Natl.Acad.Sci.USA, 118, 2021
2G6J
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BU of 2g6j by Molmil
Structure of rat nNOS (L337N) heme domain (4-aminobiopterin bound) complexed with NO
Descriptor: (1S,2S)-1-(2,4-DIAMINOPTERIDIN-6-YL)PROPANE-1,2-DIOL, ACETATE ION, ARGININE, ...
Authors:Li, H, Igarashi, J, Jamal, J, Yang, W, Poulos, T.L.
Deposit date:2006-02-24
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural studies of constitutive nitric oxide synthases with diatomic ligands bound.
J.Biol.Inorg.Chem., 11, 2006
2G6K
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BU of 2g6k by Molmil
Structure of rat nNOS heme domain (BH4 bound) complexed with NO
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, ARGININE, ...
Authors:Li, H, Igarashi, J, Jamal, J, Yang, W, Poulos, T.L.
Deposit date:2006-02-24
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies of constitutive nitric oxide synthases with diatomic ligands bound.
J.Biol.Inorg.Chem., 11, 2006

220472

數據於2024-05-29公開中

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