1MPT
| CRYSTAL STRUCTURE OF A NEW ALKALINE SERINE PROTEASE (M-PROTEASE) FROM BACILLUS SP. KSM-K16 | 分子名称: | CALCIUM ION, M-PROTEASE | 著者 | Yamane, T, Kani, T, Hatanaka, T, Suzuki, A, Ashida, T, Kobayashi, T, Ito, S, Yamashita, O. | 登録日 | 1994-04-13 | 公開日 | 1994-06-22 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure of a new alkaline serine protease (M-protease) from Bacillus sp. KSM-K16. Acta Crystallogr.,Sect.D, 51, 1995
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1JWQ
| Structure of the catalytic domain of CwlV, N-acetylmuramoyl-L-alanine amidase from Bacillus(Paenibacillus) polymyxa var.colistinus | 分子名称: | N-ACETYLMURAMOYL-L-ALANINE AMIDASE CwlV, ZINC ION | 著者 | Yamane, T, Koyama, Y, Nojiri, Y, Hikage, T, Akita, M, Suzuki, A, Shirai, T, Ise, F, Shida, T, Sekiguchi, J. | 登録日 | 2001-09-05 | 公開日 | 2003-11-18 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The Structure of the catalytic domain of N-acetylmuramoyl-L-alanine amidase, a cell wall hydrolase from Bacillus polymyxa var.colistinus and its resemblance to the structure of carboxypeptidases To be Published
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2Z33
| Solution structure of the DNA complex of PhoB DNA-binding/transactivation Domain | 分子名称: | 5'-D(*AP*CP*AP*GP*AP*TP*TP*TP*AP*TP*GP*AP*CP*AP*GP*T)-3', 5'-D(*AP*CP*TP*GP*TP*CP*AP*TP*AP*AP*AP*TP*CP*TP*GP*T)-3', Phosphate regulon transcriptional regulatory protein phoB | 著者 | Yamane, T, Okamura, H, Ikeguchi, M, Nishimura, Y, Kidera, A. | 登録日 | 2007-05-31 | 公開日 | 2008-04-22 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment. Proteins, 71, 2008
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1C1L
| LACTOSE-LIGANDED CONGERIN I | 分子名称: | PROTEIN (CONGERIN I), beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | 著者 | Shirai, T, Mitsuyama, C, Niwa, Y, Matsui, Y, Hotta, H, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K. | 登録日 | 1999-03-03 | 公開日 | 1999-10-08 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | High-resolution structure of the conger eel galectin, congerin I, in lactose-liganded and ligand-free forms: emergence of a new structure class by accelerated evolution. Structure Fold.Des., 7, 1999
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1CYC
| THE CRYSTAL STRUCTURE OF BONITO (KATSUO) FERROCYTOCHROME C AT 2.3 ANGSTROMS RESOLUTION. II. STRUCTURE AND FUNCTION | 分子名称: | FERROCYTOCHROME C, HEME C | 著者 | Tanaka, N, Yamane, T, Tsukihara, T, Ashida, T, Kakudo, M. | 登録日 | 1976-08-01 | 公開日 | 1976-10-06 | 最終更新日 | 2021-03-03 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | The crystal structure of bonito (katsuo) ferrocytochrome c at 2.3 A resolution. II. Structure and function. J.Biochem.(Tokyo), 77, 1975
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2RJ2
| Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution | 分子名称: | CHLORIDE ION, F-box only protein 2, NICKEL (II) ION | 著者 | Vaijayanthimala, S, Velmurugan, D, Mizushima, T, Yamane, T, Yoshida, Y, Tanaka, K. | 登録日 | 2007-10-14 | 公開日 | 2008-10-14 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution To be Published
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2RPQ
| Solution Structure of a SUMO-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3 | 分子名称: | Activating transcription factor 7-interacting protein 1, Small ubiquitin-related modifier 2 | 著者 | Sekiyama, N, Ikegami, T, Yamane, T, Ikeguchi, M, Uchimura, Y, Baba, D, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M. | 登録日 | 2008-07-07 | 公開日 | 2008-10-07 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of the small ubiquitin-like modifier (SUMO)-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3 J.Biol.Chem., 283, 2008
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1CH4
| MODULE-SUBSTITUTED CHIMERA HEMOGLOBIN BETA-ALPHA (F133V) | 分子名称: | CARBON MONOXIDE, MODULE-SUBSTITUTED CHIMERA HEMOGLOBIN BETA-ALPHA, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Shirai, T, Fujikake, M, Yamane, T, Inaba, K, Ishimori, K, Morishima, I. | 登録日 | 1998-06-11 | 公開日 | 1999-04-27 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of a protein with an artificial exon-shuffling, module M4-substituted chimera hemoglobin beta alpha, at 2.5 A resolution. J.Mol.Biol., 287, 1999
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1IS6
| MES-Liganded Congerin II | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Congerin II | 著者 | Shirai, T, Matsui, Y, Shionyu-Mitsuyama, C, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K. | 登録日 | 2001-11-12 | 公開日 | 2002-09-18 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal structure of a conger eel galectin (congerin II) at 1.45 A resolution: Implication for the accelerated evolution of a new ligand-binding site following gene duplication J.MOL.BIOL., 321, 2002
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2RVQ
| Solution structure of the isolated histone H2A-H2B heterodimer | 分子名称: | Histone H2A type 1-B/E, Histone H2B type 1-J | 著者 | Moriwaki, Y, Yamane, T, Ohtomo, H, Ikeguchi, M, Kurita, J, Sato, M, Nagadoi, A, Shimojo, H, Nishimura, Y. | 登録日 | 2016-03-28 | 公開日 | 2016-05-25 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the isolated histone H2A-H2B heterodimer Sci Rep, 6, 2016
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1C1F
| LIGAND-FREE CONGERIN I | 分子名称: | PROTEIN (CONGERIN I) | 著者 | Shirai, T, Mitsuyama, C, Niwa, Y, Matsui, Y, Hotta, H, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K. | 登録日 | 1999-03-03 | 公開日 | 1999-10-08 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | High-resolution structure of the conger eel galectin, congerin I, in lactose-liganded and ligand-free forms: emergence of a new structure class by accelerated evolution. Structure Fold.Des., 7, 1999
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1Z99
| Solution structure of Crotamine, a myotoxin from Crotalus durissus terrificus | 分子名称: | Crotamine | 著者 | Fadel, V, Bettendorff, P, Herrmann, T, de Azevedo, W.F, Oliveira, E.B, Yamane, T, Wuthrich, K. | 登録日 | 2005-04-01 | 公開日 | 2006-03-14 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Automated NMR structure determination and disulfide bond identification of the myotoxin crotamine from Crotalus durissus terrificus. Toxicon, 46, 2005
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2B9U
| Crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase from sulfolobus tokodaii | 分子名称: | hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase | 著者 | Rajakannan, V, Kondo, K, Mizushima, T, Suzuki, A, Yamane, T. | 登録日 | 2005-10-13 | 公開日 | 2006-10-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase from sulfolobus tokodaii TO BE PUBLISHED
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2B96
| Third Calcium ion found in an inhibitor bound phospholipase A2 | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-METHOXYBENZOIC ACID, CALCIUM ION, ... | 著者 | Sekar, K, Velmurugan, D, Yamane, T, Tsai, M.D. | 登録日 | 2005-10-11 | 公開日 | 2006-03-28 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Third Calcium ion found in an inhibitor bound phospholipase A2 Acta Crystallogr.,Sect.D, 62, 2006
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3DXW
| The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae complexed with epsilon caprolactam | 分子名称: | Alpha-amino-epsilon-caprolactam racemase, PYRIDOXAL-5'-PHOSPHATE, azepan-2-one | 著者 | Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T. | 登録日 | 2008-07-25 | 公開日 | 2009-07-28 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.41 Å) | 主引用文献 | The novel structure of a pyridoxal 5'-phosphate-dependent fold-type I racemase, alpha-amino-epsilon-caprolactam racemase from Achromobacter obae Biochemistry, 48, 2009
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3DXV
| The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae | 分子名称: | Alpha-amino-epsilon-caprolactam racemase, PYRIDOXAL-5'-PHOSPHATE | 著者 | Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T. | 登録日 | 2008-07-25 | 公開日 | 2009-02-17 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.21 Å) | 主引用文献 | The novel structure of a pyridoxal 5'-phosphate-dependent fold-type I racemase, alpha-amino-epsilon-caprolactam racemase from Achromobacter obae Biochemistry, 48, 2009
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3P5W
| Actinidin from Actinidia arguta planch (Sarusashi) | 分子名称: | Actinidin, CADMIUM ION | 著者 | Manickam, Y, Nirmal, N, Suzuki, A, Sugiyama, Y, Yamane, T, Devadasan, V, Sharma, A. | 登録日 | 2010-10-11 | 公開日 | 2010-11-03 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources Acta Crystallogr.,Sect.D, 66, 2010
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3P5V
| Actinidin from Actinidia arguta planch (Sarusashi) | 分子名称: | Actinidin, CADMIUM ION | 著者 | Manickam, Y, Nirmal, N, Suzuki, A, Sugiyama, Y, Yamane, T, Devadasan, V, Sharma, A. | 登録日 | 2010-10-11 | 公開日 | 2010-11-03 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources Acta Crystallogr.,Sect.D, 66, 2010
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3P5X
| Actinidin from Actinidia arguta planch (Sarusashi) | 分子名称: | Actinidin, CADMIUM ION | 著者 | Manickam, Y, Nirmal, N, Suzuki, A, Sugiyama, Y, Yamane, T, Devadasan, V, Sharma, A. | 登録日 | 2010-10-11 | 公開日 | 2010-11-03 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources Acta Crystallogr.,Sect.D, 66, 2010
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3P5U
| Actinidin from Actinidia arguta planch (Sarusashi) | 分子名称: | Actinidin, CADMIUM ION | 著者 | Manickam, Y, Nirmal, N, Suzuki, A, Sugiyama, Y, Yamane, T, Devadasan, V, Sharma, A. | 登録日 | 2010-10-11 | 公開日 | 2010-11-03 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources Acta Crystallogr.,Sect.D, 66, 2010
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3HJE
| Crystal structure of sulfolobus tokodaii hypothetical maltooligosyl trehalose synthase | 分子名称: | 704aa long hypothetical glycosyltransferase, GLYCEROL | 著者 | Cielo, C.B.C, Okazaki, S, Suzuki, A, Mizushima, T, Masui, R, Kuramitsu, S, Yamane, T. | 登録日 | 2009-05-21 | 公開日 | 2010-04-14 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structure of ST0929, a putative glycosyl transferase from Sulfolobus tokodaii Acta Crystallogr.,Sect.F, 66, 2010
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1QM8
| Structure of Bacteriorhodopsin at 100 K | 分子名称: | 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ... | 著者 | Takeda, K, Matsui, Y, Sato, H, Hino, T, Kanamori, E, Okumura, H, Yamane, T, Kamiya, N, Kouyama, T. | 登録日 | 1999-09-22 | 公開日 | 2000-08-16 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | A Novel Three-Dimensional Crystal of Bacteriorhodopsin Obtained by Successive Fusion of the Vesicular Assemblies. J.Mol.Biol., 283, 1998
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2ZE4
| Crystal structure of phospholipase D from streptomyces antibioticus | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Phospholipase D | 著者 | Suzuki, A, Kakuno, K, Saito, R, Iwasaki, Y, Yamane, T, Yamane, T. | 登録日 | 2007-12-05 | 公開日 | 2007-12-25 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of phospholipase D from streptomyces antibioticus To be Published
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2ZE9
| Crystal structure of H168A mutant of phospholipase D from Streptomyces antibioticus, as a complex with phosphatidylcholine | 分子名称: | (2R)-3-(phosphonooxy)propane-1,2-diyl diheptanoate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Phospholipase D | 著者 | Suzuki, A, Toda, H, Iwasaki, Y, Yamane, T, Yamane, T. | 登録日 | 2007-12-06 | 公開日 | 2007-12-25 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structure of phospholipase D from streptomyces antibioticus To be Published
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1J3F
| Crystal Structure of an Artificial Metalloprotein:Cr(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin | 分子名称: | 'N,N'-BIS-(2-HYDROXY-3-METHYL-BENZYLIDENE)-BENZENE-1,2-DIAMINE', CHROMIUM ION, Myoglobin, ... | 著者 | Koshiyama, T, Kono, M, Ohashi, M, Ueno, T, Suzuki, A, Yamane, T, Watanabe, Y. | 登録日 | 2003-01-24 | 公開日 | 2004-05-18 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Coordinated Design of Cofactor and Active Site Structures in Development of New Protein Catalysts J.Am.Chem.Soc., 127, 2005
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