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PDB: 70 件
7LFG
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BU of 7lfg by Molmil
X-ray radiation damage series on Thaumatin at 277K, crystal structure, dataset 1
分子名称: L(+)-TARTARIC ACID, Thaumatin I
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-01-17
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
5UGI
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BU of 5ugi by Molmil
Crystal Structure of Ketosteroid Isomerase D38GF54A mutant from Pseudomonas Testosteroni (tKSI) bound to Equilenin
分子名称: EQUILENIN, Steroid Delta-isomerase
著者Yabukarski, F, Lamba, V, Herschlag, D.
登録日2017-01-08
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献An Activator-Blocker Pair Provides a Controllable On-Off Switch for a Ketosteroid Isomerase Active Site Mutant.
J. Am. Chem. Soc., 139, 2017
6P44
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BU of 6p44 by Molmil
Crystal Structure of Ketosteroid Isomerase D38N mutant from Mycobacterium hassiacum (mhKSI) bound to 3,4-dinitrophenol
分子名称: 3,4-dinitrophenol, GUANIDINE, SULFATE ION, ...
著者Yabukarski, F, Doukov, T, Pinney, M, Herschlag, D.
登録日2019-05-25
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.251 Å)
主引用文献Parallel molecular mechanisms for enzyme temperature adaptation.
Science, 371, 2021
7PON
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C TERMINAL DOMAIN OF NIPAH VIRUS PHOSPHOPROTEIN
分子名称: Phosphoprotein
著者Yabukarski, F, Tarbouriech, N, Jamin, M, Bourhis, J.M.
登録日2021-09-09
公開日2022-04-20
最終更新日2022-04-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Dynamics of the C-terminal X Domain of Nipah and Hendra Viruses Controls the Attachment to the C-terminal Tail of the Nucleocapsid Protein.
J.Mol.Biol., 434, 2022
6P3L
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BU of 6p3l by Molmil
Crystal Structure of Ketosteroid Isomerase from Mycobacterium hassiacum (mhKSI)
分子名称: GUANIDINE, SULFATE ION, SnoaL-like domain protein
著者Yabukarski, F, Doukov, T, Pinney, M, Herschlag, D.
登録日2019-05-23
公開日2020-05-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.571 Å)
主引用文献Parallel molecular mechanisms for enzyme temperature adaptation.
Science, 371, 2021
4GJW
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BU of 4gjw by Molmil
Structure of the tetramerization domain of Nipah virus phosphoprotein
分子名称: ARGININE, CHLORIDE ION, GLYCEROL, ...
著者Yabukarski, F, Tarbouriech, N, Jamin, M.
登録日2012-08-10
公開日2014-02-12
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Nipah Virus Phosphoprotein Oligomerisation domain
To be Published
4HEO
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BU of 4heo by Molmil
Hendra virus Phosphoprotein C terminal domain
分子名称: CHLORIDE ION, MAGNESIUM ION, Phosphoprotein
著者Yabukarski, F, Tarbouriech, N, Jamin, M.
登録日2012-10-04
公開日2013-10-09
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Atomic Resolution Description of the Interaction between the Nucleoprotein and Phosphoprotein of Hendra Virus.
Plos Pathog., 9, 2013
6C1J
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BU of 6c1j by Molmil
Crystal Structure of Ketosteroid Isomerase Y32F/Y57F/D40N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
分子名称: 3,4-dinitrophenol, CHLORIDE ION, MAGNESIUM ION, ...
著者Yabukarski, F, Pinney, M.M, Herschlag, D.
登録日2018-01-04
公開日2018-07-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.063 Å)
主引用文献Structural Coupling Throughout the Active Site Hydrogen Bond Networks of Ketosteroid Isomerase and Photoactive Yellow Protein.
J. Am. Chem. Soc., 140, 2018
7RXF
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BU of 7rxf by Molmil
Multi-conformer model of Apo Ketosteroid Isomerase Y57F mutant from Pseudomonas Putida (pKSI) at 250 K
分子名称: CHLORIDE ION, MAGNESIUM ION, Steroid Delta-isomerase
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-08-23
公開日2022-11-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Ensemble-function relationships to dissect mechanisms of enzyme catalysis.
Sci Adv, 8, 2022
7RY4
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BU of 7ry4 by Molmil
Multi-conformer model of Ketosteroid Isomerase Y57F/D40N mutant from Pseudomonas Putida (pKSI) bound to a transition state analog at 250 K
分子名称: (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one, CHLORIDE ION, MAGNESIUM ION, ...
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-08-24
公開日2022-11-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Ensemble-function relationships to dissect mechanisms of enzyme catalysis.
Sci Adv, 8, 2022
7RXK
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BU of 7rxk by Molmil
Multi-conformer model of Apo Ketosteroid Isomerase Y32F/Y57F mutant from Pseudomonas Putida (pKSI) at 250 K
分子名称: CHLORIDE ION, MAGNESIUM ION, Steroid Delta-isomerase
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-08-23
公開日2022-11-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Ensemble-function relationships to dissect mechanisms of enzyme catalysis.
Sci Adv, 8, 2022
6C17
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BU of 6c17 by Molmil
Crystal Structure of Ketosteroid Isomerase D40N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
分子名称: 3,4-dinitrophenol, MAGNESIUM ION, Steroid Delta-isomerase
著者Yabukarski, F, Pinney, M, Herschlag, D.
登録日2018-01-04
公開日2018-07-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural Coupling Throughout the Active Site Hydrogen Bond Networks of Ketosteroid Isomerase and Photoactive Yellow Protein.
J. Am. Chem. Soc., 140, 2018
6C1X
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BU of 6c1x by Molmil
Crystal Structure of Ketosteroid Isomerase D40N/D103N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
分子名称: 3,4-dinitrophenol, MAGNESIUM ION, Steroid Delta-isomerase
著者Yabukarski, F, Pinney, M.M, Herschlag, D.
登録日2018-01-05
公開日2018-07-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural Coupling Throughout the Active Site Hydrogen Bond Networks of Ketosteroid Isomerase and Photoactive Yellow Protein.
J. Am. Chem. Soc., 140, 2018
6UBQ
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BU of 6ubq by Molmil
Crystal Structure of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) bound to 4-Androstenedione at 100 K
分子名称: 4-ANDROSTENE-3-17-DIONE, CHLORIDE ION, MAGNESIUM ION, ...
著者Yabukarski, F, Herschlag, D.
登録日2019-09-12
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.2991 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UCW
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BU of 6ucw by Molmil
Multi-conformer model of Apo Ketosteroid Isomerase from Pseudomonas Putida (pKSI) at 250 K
分子名称: CHLORIDE ION, MAGNESIUM ION, Steroid Delta-isomerase
著者Yabukarski, F, Herschlag, D, Biel, J.T, Fraser, J.S.
登録日2019-09-17
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
6TZD
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BU of 6tzd by Molmil
Crystal Structure of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) bound to 4-Androstenedione at 280 K
分子名称: 4-ANDROSTENE-3-17-DIONE, CHLORIDE ION, MAGNESIUM ION, ...
著者Yabukarski, F, Herschlag, D.
登録日2019-08-12
公開日2020-08-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4507 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
6U1Z
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BU of 6u1z by Molmil
Crystal Structure of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) at 280 K
分子名称: CHLORIDE ION, MAGNESIUM ION, Steroid Delta-isomerase
著者Yabukarski, F, Herschlag, D.
登録日2019-08-18
公開日2020-08-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5005 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
6U4I
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BU of 6u4i by Molmil
Crystal Structure of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) bound to Equilenin at 280 K
分子名称: CHLORIDE ION, EQUILENIN, MAGNESIUM ION, ...
著者Yabukarski, F, Herschlag, D.
登録日2019-08-25
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UCN
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BU of 6ucn by Molmil
Multi-conformer model of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) bound to Equilenin at 250 K
分子名称: CHLORIDE ION, EQUILENIN, MAGNESIUM ION, ...
著者Yabukarski, F, Herschlag, D, Biel, J.T, Fraser, J.S.
登録日2019-09-16
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UCY
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BU of 6ucy by Molmil
Multi-conformer model of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) bound to 4-Androstenedione at 250 K
分子名称: 4-ANDROSTENE-3-17-DIONE, CHLORIDE ION, MAGNESIUM ION, ...
著者Yabukarski, F, Herschlag, D, Biel, J.T, Fraser, J.S.
登録日2019-09-18
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.
Proc.Natl.Acad.Sci.USA, 117, 2020
7LQA
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BU of 7lqa by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 2 (merged)
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-13
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LPU
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BU of 7lpu by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 1
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-12
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LN7
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BU of 7ln7 by Molmil
X-ray radiation damage series on Proteinase K at 277K, crystal structure, dataset 1
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-06
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LPV
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BU of 7lpv by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 2
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-12
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LQ9
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BU of 7lq9 by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 4
分子名称: CALCIUM ION, Proteinase K, SULFATE ION
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-13
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022

 

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