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PDB: 1423 results

4EQG
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Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Ala-AMS
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012
4LR3
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Crystal structure of E. coli YfbU at 2.5 A resolution
Descriptor: MAGNESIUM ION, PHOSPHATE ION, protein YfbU
Authors:Wang, J, Wing, R.A.
Deposit date:2013-07-19
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Diamonds in the rough: a strong case for the inclusion of weak-intensity X-ray diffraction data.
Acta Crystallogr.,Sect.D, 70, 2014
4EQE
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Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Lys-AMS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINE, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012
5YYS
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BU of 5yys by Molmil
Cryo-EM structure of L-fucokinase, GDP-fucose pyrophosphorylase (FKP)in Bacteroides fragilis
Descriptor: L-fucokinase, L-fucose-1-P guanylyltransferase
Authors:Wang, J, Hu, H, Liu, Y, Zhou, Q, Wu, P, Yan, N, Wang, H.W, Wu, J.W, Sun, L.
Deposit date:2017-12-11
Release date:2018-12-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of L-fucokinase/GDP-fucose pyrophosphorylase (FKP) in Bacteroides fragilis.
Protein Cell, 10, 2019
7WSB
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BU of 7wsb by Molmil
The ternary complex structure of FtmOx1 with a-ketoglutarate and 13-oxo-fumitremorgin B
Descriptor: 13-Oxofumitremorgin B, 2-OXOGLUTARIC ACID, COBALT (II) ION, ...
Authors:Wang, J, Wang, X.Y, Wang, Y.Y, Yan, W.P.
Deposit date:2022-01-28
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Dissecting the Mechanism of the Nonheme Iron Endoperoxidase FtmOx1 Using Substrate Analogues.
Jacs Au, 2, 2022
7LHL
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cryo-EM structure of Mycobacterium smegmatis Lhr helicase C-terminal domain
Descriptor: ATP-dependent DNA helicase
Authors:Wang, J, Warren, G.M, Shuman, S, Patel, D.J.
Deposit date:2021-01-25
Release date:2021-04-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Oligomeric quaternary structure of Escherichia coli and Mycobacterium smegmatis Lhr helicases is nucleated by a novel C-terminal domain composed of five winged-helix modules.
Nucleic Acids Res., 49, 2021
4EQH
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BU of 4eqh by Molmil
Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Trp-AMS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012
4JFG
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Crystal structure of sfGFP-66-HqAla
Descriptor: CESIUM ION, Green fluorescent protein, quinolin-8-ol
Authors:Wang, J, Liu, X, Li, J, Zhang, W, Hu, M, Zhou, J.
Deposit date:2013-02-28
Release date:2013-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Significant expansion of the fluorescent protein chromophore through the genetic incorporation of a metal-chelating unnatural amino acid.
Angew.Chem.Int.Ed.Engl., 52, 2013
7WVZ
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CalA3_modular PKS_KS-AT-DH-KR
Descriptor: Beta-ketoacyl-acyl-carrier-protein synthase I
Authors:Wang, J, Wang, Z.
Deposit date:2022-02-12
Release date:2023-02-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:C-N bond formation by a polyketide synthase.
Nat Commun, 14, 2023
4NS5
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BU of 4ns5 by Molmil
Crystal structure of human BS69 Bromo-Zinc finger-PWWP
Descriptor: ZINC ION, Zinc finger MYND domain-containing protein 11
Authors:Wang, J.C, Qin, S, Li, F.D, Li, S, Zhang, W, Wu, J.H, Shi, Y.Y.
Deposit date:2013-11-28
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human BS69 Bromo-ZnF-PWWP reveals its role in H3K36me3 nucleosome binding.
Cell Res., 24, 2014
4F7E
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Crystal structure of bovine CD1d with bound C16:0-alpha-galactosyl ceramide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Wang, J, Zajonc, D.M.
Deposit date:2012-05-15
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Bovine CD1d Reveal Altered αGalCer Presentation and a Restricted A' Pocket Unable to Bind Long-Chain Glycolipids.
Plos One, 7, 2012
7VIK
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BU of 7vik by Molmil
Asymmetric unit of cryoEM structure of bacteriophage lambda capsid at 3.76 Angstrom
Descriptor: Capsid decoration protein, Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-27
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
8HFS
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BU of 8hfs by Molmil
The structure of LcnA, LciA, and the man-PTS of Lactococcus lactis
Descriptor: Bacteriocin lactococcin-A, Lactococcin-A immunity protein, Mannose-specific PTS system, ...
Authors:Wang, J.W.
Deposit date:2022-11-12
Release date:2023-02-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural Basis of the Mechanisms of Action and Immunity of Lactococcin A, a Class IId Bacteriocin.
Appl.Environ.Microbiol., 89, 2023
7DJZ
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Crystal structure of SARS-CoV-2 Spike RBD in complex with MW01 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, MW01 heavy chain, ...
Authors:Wang, J, Jiao, S, Wang, R, Zhang, J, Zhang, M, Wang, M.
Deposit date:2020-11-22
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Antibody-dependent enhancement (ADE) of SARS-CoV-2 pseudoviral infection requires Fc gamma RIIB and virus-antibody complex with bivalent interaction.
Commun Biol, 5, 2022
6MRK
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BU of 6mrk by Molmil
Crystal structure of dmNxf2 NTF2-like domain in complex with Nxt1/p15
Descriptor: NTF2-related export protein, Nuclear RNA export factor 2
Authors:Wang, J, Patel, D.J.
Deposit date:2018-10-13
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation.
Nat.Struct.Mol.Biol., 26, 2019
7DPM
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BU of 7dpm by Molmil
Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, ...
Authors:Wang, J, Jiao, S, Wang, R, Zhang, J, Zhang, M, Wang, M.
Deposit date:2020-12-20
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.304 Å)
Cite:Characterization of MW06, a human monoclonal antibody with cross-neutralization activity against both SARS-CoV-2 and SARS-CoV.
Mabs, 13, 2021
6MNZ
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BU of 6mnz by Molmil
Crystal structure of RibBX, a two domain 3,4-dihydroxy-2-butanone 4-phosphate synthase from A. baumannii.
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, CHLORIDE ION, SULFATE ION
Authors:Wang, J, Gonzalez-Gutierrez, G, Giedroc, D.P.
Deposit date:2018-10-03
Release date:2019-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Multi-metal Restriction by Calprotectin Impacts De Novo Flavin Biosynthesis in Acinetobacter baumannii.
Cell Chem Biol, 26, 2019
5BV2
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BU of 5bv2 by Molmil
Crystal structure of E. coli HPII catalase variant
Descriptor: 1,2-ETHANEDIOL, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Catalase HPII, ...
Authors:Wang, J, Lomkalin, I.V.
Deposit date:2015-06-04
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Influence of weak-intensity data, ordered water molecules, and hydrogen atoms on the refinement of a large protein crystal structure
To be Published
7VII
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BU of 7vii by Molmil
cryoEM structure of bacteriophage lambda capsid at 5.6 Angstrom
Descriptor: Capsid decoration protein, Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-27
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
5V2C
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BU of 5v2c by Molmil
RE-REFINEMENT OF CRYSTAL STRUCTURE OF PHOTOSYSTEM II COMPLEX
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Wang, J, Wiwczar, J.M, Brudvig, G.W.
Deposit date:2017-03-03
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chlorophyll a with a farnesyl tail in thermophilic cyanobacteria.
Photosyn. Res., 134, 2017
3CXP
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BU of 3cxp by Molmil
Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 mutant E156A
Descriptor: CHLORIDE ION, Glucosamine 6-phosphate N-acetyltransferase
Authors:Wang, J, Liu, X, Li, L.-F, Su, X.-D.
Deposit date:2008-04-25
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett., 582, 2008
7DK2
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BU of 7dk2 by Molmil
Crystal structure of SARS-CoV-2 Spike RBD in complex with MW07 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MW07 heavy chain, MW07 light chain, ...
Authors:Wang, J, Jiao, S, Wang, R, Zhang, J, Zhang, M, Wang, M, Chen, S.
Deposit date:2020-11-22
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Architectural versatility of spike neutralization by a SARS-CoV-2 antibody
To Be Published
1ZET
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BU of 1zet by Molmil
X-ray data do not support hoogsteen base-pairing during replication by human polymerase iota
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(P*AP*GP*GP*GP*(BRU)P*CP*CP*(BRU)P*(BRU)P*CP*CP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Wang, J.
Deposit date:2005-04-19
Release date:2005-07-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA polymerases: Hoogsteen base-pairing in DNA replication?
Nature, 437, 2005
3V69
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BU of 3v69 by Molmil
Filia-N crystal structure
Descriptor: Protein Filia
Authors:Wang, J, Xu, M, Zhu, K, Li, L, Liu, X.
Deposit date:2011-12-19
Release date:2012-02-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-terminus of FILIA Forms an Atypical KH Domain with a Unique Extension Involved in Interaction with RNA.
Plos One, 7, 2012
6NXF
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BU of 6nxf by Molmil
Crystal structure of mouse REC114 PH domain in complex with ANKRD31 C terminus
Descriptor: Ankyrin repeat domain 31, Meiotic recombination protein REC114
Authors:Wang, J, Patel, D.J.
Deposit date:2019-02-08
Release date:2019-04-24
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.791 Å)
Cite:REC114 Partner ANKRD31 Controls Number, Timing, and Location of Meiotic DNA Breaks.
Mol.Cell, 74, 2019

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