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PDB: 13052 results

4FLL
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BU of 4fll by Molmil
Human MetAP1 with bengamide analog YZ6, in Mn form
Descriptor: (E,2R,3R,4S,5R)-N-[(3R)-3-(furan-2-yl)-3-phenyl-propyl]-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
Authors:Ye, Q.Z, Xu, W.
Deposit date:2012-06-14
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012
2LUW
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BU of 2luw by Molmil
Solution structure of vEP C-ter 100
Descriptor: Metalloprotease
Authors:Yun, J, Lee, W.
Deposit date:2012-06-21
Release date:2013-06-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:C-ter100 region of vibrio extracellular metalloprotease
To be Published
2M9N
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BU of 2m9n by Molmil
Solution Structure of (HhH)2 domain of human FAAP24
Descriptor: Fanconi anemia-associated protein of 24 kDa
Authors:Wu, F, Han, X, Shi, C, Gong, W, Tian, C.
Deposit date:2013-06-18
Release date:2013-09-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure analysis of FAAP24 reveals single-stranded DNA-binding activity and domain functions in DNA damage response.
Cell Res., 23, 2013
5YP4
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BU of 5yp4 by Molmil
Crystal structure of dipeptidyl peptidase IV (DPP IV) with Lys-Pro from Pseudoxanthomonas mexicana WO24
Descriptor: Dipeptidyl aminopeptidase 4, GLYCEROL, LYSINE, ...
Authors:Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T.
Deposit date:2017-11-01
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues.
Sci Rep, 8, 2018
2MAM
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BU of 2mam by Molmil
Solution structure of the interdigitated double Tudor domain of RBBP1
Descriptor: AT-rich interactive domain-containing protein 4A
Authors:Gong, W, Feng, Y.
Deposit date:2013-07-15
Release date:2014-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Retinoblastoma-binding protein 1 has an interdigitated double Tudor domain with DNA binding activity.
J.Biol.Chem., 289, 2014
5YQA
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BU of 5yqa by Molmil
The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
Descriptor: 4-propylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Zhou, W, Zhang, T, Qiao, R, Bell, S, Coleman, T.
Deposit date:2017-11-06
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
To Be Published
1XQY
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BU of 1xqy by Molmil
Crystal structure of F1-mutant S105A complex with PRO-LEU-GLY-GLY
Descriptor: PLGG, PROLINE, Proline iminopeptidase
Authors:Goettig, P, Brandstetter, H, Groll, M, Goehring, W, Konarev, P.V, Svergun, D.I, Huber, R, Kim, J.-S.
Deposit date:2004-10-13
Release date:2005-07-12
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray snapshots of peptide processing in mutants of tricorn-interacting factor F1 from Thermoplasma acidophilum
J.Biol.Chem., 280, 2005
6MT7
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BU of 6mt7 by Molmil
Phlebotomus duboscqi salivary D7 protein, selenomethionine derivative
Descriptor: 26.7 kDa salivary protein, FRAGMENT OF TRITON X-100
Authors:Andersen, J.F, Jablonka, W.
Deposit date:2018-10-19
Release date:2019-04-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Functional and structural similarities of D7 proteins in the independently-evolved salivary secretions of sand flies and mosquitoes.
Sci Rep, 9, 2019
6MTF
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BU of 6mtf by Molmil
D7 protein from Phlebotomus duboscqi, native
Descriptor: 26.7 kDa salivary protein, FRAGMENT OF TRITON X-100
Authors:Andersen, J.F, Jablonka, W.
Deposit date:2018-10-19
Release date:2019-04-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Functional and structural similarities of D7 proteins in the independently-evolved salivary secretions of sand flies and mosquitoes.
Sci Rep, 9, 2019
1FI9
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BU of 1fi9 by Molmil
SOLUTION STRUCTURE OF THE IMIDAZOLE COMPLEX OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, IMIDAZOLE
Authors:Banci, L, Bertini, I, Liu, G, Lu, J, Reddig, T, Tang, W, Wu, Y, Zhu, D.
Deposit date:2000-08-03
Release date:2000-08-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Effects of extrinsic imidazole ligation on the molecular and electronic structure of cytochrome c
J.Biol.Inorg.Chem., 6, 2001
6AY4
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BU of 6ay4 by Molmil
Naegleria fowleri CYP51-fluconazole complex
Descriptor: 1,2-ETHANEDIOL, 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL, CYP51, ...
Authors:Debnath, A, Calvet, C.M, Jennings, G, Zhou, W, Aksenov, A, Luth, M, Abagyan, R, Nes, W.D, McKerrow, J.H, Podust, L.M.
Deposit date:2017-09-07
Release date:2017-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:CYP51 is an essential drug target for the treatment of primary amoebic meningoencephalitis (PAM).
PLoS Negl Trop Dis, 11, 2017
6MH6
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BU of 6mh6 by Molmil
High-viscosity injector-based Pink Beam Serial Crystallography of Micro-crystals at a Synchrotron Radiation Source.
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Martin-Garcia, J.M, Zhu, L, Mendez, D, Lee, M, Chun, E, Li, C, Hu, H, Subramanian, G, Kissick, D, Ogata, C, Henning, R, Ishchenko, A, Dobson, Z, Zhan, S, Weierstall, U, Spence, J.C.H, Fromme, P, Zatsepin, N.A, Fischetti, R.F, Cherezov, V, Liu, W.
Deposit date:2018-09-17
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source.
Iucrj, 6, 2019
1XUB
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BU of 1xub by Molmil
Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens
Descriptor: Phenazine biosynthesis protein phzF, SULFATE ION
Authors:Blankenfeldt, W, Kuzin, A.P, Skarina, T, Korniyenko, Y, Tong, L, Bayer, P, Janning, P, Thomashow, L.S, Mavrodi, D.V.
Deposit date:2004-10-26
Release date:2004-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens
PROC.NATL.ACAD.SCI.USA, 101, 2004
6MKA
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BU of 6mka by Molmil
Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the open conformation
Descriptor: SULFATE ION, penicillin binding protein 5 (PBP5)
Authors:Moon, T.M, Lee, C, D'Andrea, E.D, Peti, W, Page, R.
Deposit date:2018-09-25
Release date:2018-10-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.698 Å)
Cite:The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
4FYG
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BU of 4fyg by Molmil
Structural basis for substrate recognition by a novel Legionella phosphoinositide phosphatase
Descriptor: (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate, SidF, inhibitor of growth family, ...
Authors:Hsu, F.S, Zhu, W, Brennan, L, Tao, L, Luo, Z.Q, Mao, Y.
Deposit date:2012-07-04
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.822 Å)
Cite:Structural basis for substrate recognition by a unique Legionella phosphoinositide phosphatase.
Proc.Natl.Acad.Sci.USA, 109, 2012
5Y29
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BU of 5y29 by Molmil
Crystal structure of Ostrinia furnacalis Group II chitinase catalytic domain 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, insect group II chitinase
Authors:Chen, W, Qu, M.B, Zhou, Y, Yang, Q.
Deposit date:2017-07-24
Release date:2018-01-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of group II chitinase (ChtII) catalysis completes the puzzle of chitin hydrolysis in insects
J. Biol. Chem., 293, 2018
2MII
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BU of 2mii by Molmil
NMR structure of E. coli LpoB
Descriptor: Penicillin-binding protein activator LpoB
Authors:Jean, N.L, Egan, A.J.F, Koumoutsi, A, Bougault, C.M, Typas, A, Vollmer, W, Simorre, J.P.
Deposit date:2013-12-13
Release date:2014-05-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Outer-membrane lipoprotein LpoB spans the periplasm to stimulate the peptidoglycan synthase PBP1B.
Proc.Natl.Acad.Sci.USA, 111, 2014
1X6I
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BU of 1x6i by Molmil
Crystal structure of ygfY from Escherichia coli
Descriptor: Hypothetical protein ygfY
Authors:Lim, K, Doseeva, V, Sarikaya Demirkan, E, Pullalarevu, S, Krajewski, W, Galkin, A, Howard, A, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:2004-08-11
Release date:2005-02-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the YgfY from Escherichia coli, a protein that may be involved in transcriptional regulation
Proteins, 58, 2005
1X74
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BU of 1x74 by Molmil
Alpha-methylacyl-CoA racemase from Mycobacterium tuberculosis- mutational and structural characterization of the fold and active site
Descriptor: 2-methylacyl-CoA racemase, GLYCEROL, PHOSPHATE ION
Authors:Kalle, S, Bhaumik, P, Schmitz, W, Kotti, T.J, Conzelmann, E, Wierenga, R.K, Hiltunen, J.K.
Deposit date:2004-08-13
Release date:2005-01-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:{alpha}-Methylacyl-CoA Racemase from Mycobacterium tuberculosis: MUTATIONAL AND STRUCTURAL CHARACTERIZATION OF THE ACTIVE SITE AND THE FOLD
J.Biol.Chem., 280, 2005
2M9I
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BU of 2m9i by Molmil
NMR solution structure of Pin1 WW domain variant 6-1
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Enck, S, Chen, W, Price, J.L, Powers, E.T, Wong, C, Dyson, H.J, Kelly, J.W.
Deposit date:2013-06-10
Release date:2013-06-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and energetic basis of carbohydrate-aromatic packing interactions in proteins.
J.Am.Chem.Soc., 135, 2013
1DWU
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BU of 1dwu by Molmil
Ribosomal protein L1
Descriptor: RIBOSOMAL PROTEIN L1
Authors:Tishchenko, S.V, Nevskaya, N.A, Pavelyev, M.N, Nikonov, S.V, Garber, M.B, Piendl, W.
Deposit date:1999-12-13
Release date:2000-12-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Ribosomal Protein L1 from Methanococcus Thermolithotrophicus. Functionally Important Structural Invariants on the L1 Surface
Acta Crystallogr.,Sect.D, 58, 2002
2M17
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BU of 2m17 by Molmil
ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1)
Descriptor: Ubiquitin-like domain-containing CTD phosphatase 1
Authors:Lee, W, Yun, J.
Deposit date:2012-11-19
Release date:2013-06-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase.
Plos One, 8, 2013
1RL1
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BU of 1rl1 by Molmil
Solution structure of human Sgt1 CS domain
Descriptor: Suppressor of G2 allele of SKP1 homolog
Authors:Lee, Y.-T, Jacob, J, Michowski, W, Nowotny, M, Kuznicki, J, Chazin, W.J.
Deposit date:2003-11-24
Release date:2004-05-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Human Sgt1 Binds HSP90 through the CHORD-Sgt1 Domain and Not the Tetratricopeptide Repeat Domain
J.Biol.Chem., 279, 2004
6MKG
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BU of 6mkg by Molmil
Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the benzylpenicilin-bound form
Descriptor: OPEN FORM - PENICILLIN G, SULFATE ION, penicillin binding protein 5 (PBP5)
Authors:Moon, T.M, Lee, C, D'Andrea, E.D, Peti, W, Page, R.
Deposit date:2018-09-25
Release date:2018-10-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
6MJW
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human cGAS catalytic domain bound with the inhibitor G150
Descriptor: 1-[9-(6-aminopyridin-3-yl)-6,7-dichloro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
Deposit date:2018-09-23
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019

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