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PDB: 12889 件

6RDW
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Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RE5
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Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2C, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RED
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Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3A, focussed refinement of F1 head and rotor
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RE9
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BU of 6re9 by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2D, monomer-masked refinement
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RET
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BU of 6ret by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3C, monomer-masked refinement
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
2OLP
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BU of 2olp by Molmil
Structure and ligand selection of hemoglobin II from Lucina pectinata
分子名称: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Gavira, J.A, Camara-Artigas, A, de Jesus, W, Lopez-Garriga, J, Garcia-Ruiz, J.M.
登録日2007-01-19
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.932 Å)
主引用文献Structure and Ligand Selection of Hemoglobin II from Lucina pectinata
J.Biol.Chem., 283, 2008
4YJY
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BU of 4yjy by Molmil
Crystal structure of Type III polyketide synthase from Oryza sativa
分子名称: Chalcone synthase 1
著者Wongsantichon, J, Robinson, R.C, Yew, W.S.
登録日2015-03-03
公開日2016-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Synthetic Polyketide Enzymology: Platform for Biosynthesis of Antimicrobial Polyketides
Acs Catalysis, 5, 2015
6FKF
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BU of 6fkf by Molmil
Chloroplast F1Fo conformation 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Hahn, A, Vonck, J, Mills, D.J, Meier, T, Kuehlbrandt, W.
登録日2018-01-24
公開日2018-05-23
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure, mechanism, and regulation of the chloroplast ATP synthase.
Science, 360, 2018
6IOC
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The structure of the H109Q mutant of UdgX in complex with uracil
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, URACIL
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.624 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
4O61
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Structure of human ALKBH5 crystallized in the presence of citrate
分子名称: CITRIC ACID, GLYCEROL, RNA demethylase ALKBH5, ...
著者Tempel, W, Chao, X, Liu, K, Dong, A, Cerovina, T, He, H, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2013-12-20
公開日2014-02-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of human ALKBH5 demethylase reveal a unique binding mode for specific single-stranded N6-methyladenosine RNA demethylation.
J.Biol.Chem., 289, 2014
6IOA
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BU of 6ioa by Molmil
The structure of UdgX in complex with uracil
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION, ...
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
3BFD
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BU of 3bfd by Molmil
Crystal Structure of the Class A beta-lactamase SED-G238C mutant from Citrobacter sedlakii
分子名称: CACODYLATE ION, Class A beta-lactamase Sed1
著者Pernot, L, Petrella, S, Sougakoff, W.
登録日2007-11-21
公開日2007-12-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献acyl-intermediate structures of the class A beta-lactamase SED-G238C
To be Published
1ZZS
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BU of 1zzs by Molmil
Bovine eNOS N368D single mutant with L-N(omega)-Nitroarginine-(4R)-Amino-L-Proline Amide Bound
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, GLYCEROL, ...
著者Li, H, Flinspach, M.L, Igarashi, J, Jamal, J, Yang, W, Gomez-Vidal, J.A, Litzinger, E.A, Silverman, R.B, Poulos, T.L.
登録日2005-06-14
公開日2005-12-06
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Exploring the Binding Conformations of Bulkier Dipeptide Amide Inhibitors in Constitutive Nitric Oxide Synthases.
Biochemistry, 44, 2005
6YSR
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BU of 6ysr by Molmil
Structure of the P+9 stalled ribosome complex
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Chan, K.-H, Petrychenko, V, Mueller, C, Maracci, C, Holtkamp, W, Wilson, D.N, Fischer, N, Rodnina, M.V.
登録日2020-04-23
公開日2020-08-19
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Mechanism of ribosome rescue by alternative ribosome-rescue factor B.
Nat Commun, 11, 2020
5OQ1
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BU of 5oq1 by Molmil
Crystal structure of Serratia marcescens ChiX (used as MR model for superior PDB 5OPZ)
分子名称: CHLORIDE ION, ChiX, ZINC ION
著者Owen, R.A, Fyfe, P.K, Lodge, A, Biboy, J, Vollmer, W, Hunter, W.N, Sargent, F.
登録日2017-08-10
公開日2018-01-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Structure and activity of ChiX: a peptidoglycan hydrolase required for chitinase secretion by Serratia marcescens.
Biochem. J., 475, 2018
1BOZ
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BU of 1boz by Molmil
STRUCTURE-BASED DESIGN AND SYNTHESIS OF LIPOPHILIC 2,4-DIAMINO-6-SUBSTITUTED QUINAZOLINES AND THEIR EVALUATION AS INHIBITORS OF DIHYDROFOLATE REDUCTASE AND POTENTIAL ANTITUMOR AGENTS
分子名称: N6-(2,5-DIMETHOXY-BENZYL)-N6-METHYL-PYRIDO[2,3-D]PYRIMIDINE-2,4,6-TRIAMINE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (DIHYDROFOLATE REDUCTASE)
著者Gangjee, A, Vidwans, A.P, Vasudevan, A, Queener, S.F, Kisliuk, R.L, Cody, V, Li, R, Galitsky, N, Luft, J.R, Pangborn, W.
登録日1998-08-06
公開日1998-08-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based design and synthesis of lipophilic 2,4-diamino-6-substituted quinazolines and their evaluation as inhibitors of dihydrofolate reductases and potential antitumor agents.
J.Med.Chem., 41, 1998
5OW7
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BU of 5ow7 by Molmil
VDR complex
分子名称: (3~{S})-3-[(1~{S},3~{a}~{S},4~{E},7~{a}~{S})-7~{a}-methyl-4-[(2~{Z})-2-[(5~{S})-2-methylidene-5-oxidanyl-cyclohexylidene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]-3-oxidanyl-~{N}-propan-2-yl-butanamide, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N, Li, W.
登録日2017-08-31
公開日2018-02-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Investigation of 20S-hydroxyvitamin D3 analogs and their 1 alpha-OH derivatives as potent vitamin D receptor agonists with anti-inflammatory activities.
Sci Rep, 8, 2018
1BS7
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PEPTIDE DEFORMYLASE AS NI2+ CONTAINING FORM
分子名称: NICKEL (II) ION, PROTEIN (PEPTIDE DEFORMYLASE), SULFATE ION
著者Becker, A, Schlichting, I, Kabsch, W, Groche, D, Schultz, S, Wagner, A.F.V.
登録日1998-09-01
公開日1999-08-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of peptide deformylase and identification of the substrate binding site.
J.Biol.Chem., 273, 1998
3ARQ
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BU of 3arq by Molmil
Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - complex structure with IDARUBICIN
分子名称: Chitinase A, GLYCEROL, IDARUBICIN
著者Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
登録日2010-12-09
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
3AS3
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BU of 3as3 by Molmil
Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - W275G mutant complex structure with 2-(imidazolin-2-yl)-5-isothiocyanatobenzofuran
分子名称: 2-(5-isothiocyanato-1-benzofuran-2-yl)-4,5-dihydro-1H-imidazole, Chitinase A, GLYCEROL
著者Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
登録日2010-12-09
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
8IDE
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BU of 8ide by Molmil
Structure of an ancient TsaD-TsaC-SUA5-TcdA modular enzyme (TsaN)
分子名称: MANGANESE (II) ION, N(6)-L-threonylcarbamoyladenine synthase
著者Zhang, Z.L, Jin, M.Q, Yu, Z.J, Chen, W, Wang, X.L, Lei, D.S, Zhang, W.H.
登録日2023-02-13
公開日2023-07-26
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structure-function analysis of an ancient TsaD-TsaC-SUA5-TcdA modular enzyme reveals a prototype of tRNA t6A and ct6A synthetases.
Nucleic Acids Res., 51, 2023
4N7R
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BU of 4n7r by Molmil
Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with its binding protein
分子名称: Genomic DNA, chromosome 3, P1 clone: MXL8, ...
著者Zhao, A, Fang, Y, Lin, Y, Gong, W, Liu, L.
登録日2013-10-16
公開日2014-05-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with its stimulator protein
Proc.Natl.Acad.Sci.USA, 111, 2014
3ARZ
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BU of 3arz by Molmil
Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - complex structure with 2-(imidazolin-2-yl)-5-isothiocyanatobenzofuran
分子名称: 2-(5-isothiocyanato-1-benzofuran-2-yl)-4,5-dihydro-1H-imidazole, Chitinase A, GLYCEROL
著者Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
登録日2010-12-09
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
6TAH
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BU of 6tah by Molmil
Crystal structure of a Nu-class Glutathione-S-Transferase from Pseudomonas aeruginosa PACS2 bound to glutathione
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Glutathione S-transferase, ...
著者Feiler, C.G, Blankenfeldt, W.
登録日2019-10-29
公開日2020-09-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of nu-class glutathione transferase from Pseudomonas aeruginosa related to YfcG from E. coli
To Be Published
6TH5
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BU of 6th5 by Molmil
Crystal structure of mature wildtype primitive Phytochelatin synthase from Nostoc spec. - Alr0975
分子名称: Alr0975 protein, CALCIUM ION
著者Feiler, C.G, Blankenfeldt, W.
登録日2019-11-18
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of mature wildtype primitive Phytochelatin synthase from Nostoc spec. - Alr0975
To Be Published

222036

件を2024-07-03に公開中

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