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PDB: 12895 件

3THW
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Human MutSbeta complexed with an IDL of 4 bases (Loop4) and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA Loop4 hairpin, DNA mismatch repair protein Msh2, ...
著者Yang, W.
登録日2011-08-19
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Mechanism of mismatch recognition revealed by human MutSbeta bound to unpaired DNA loops
Nat.Struct.Mol.Biol., 19, 2012
4COD
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BU of 4cod by Molmil
Encoded library technology as a source of hits for the discovery and lead optimization of a potent and selective class of bactericidal direct inhibitors of Mycobacterium tuberculosis InhA
分子名称: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], N-((3R,5S)-1-(benzofuran-3-carbonyl)-5-(ethylcarbamoyl)pyrrolidin-3-yl)-3-ethyl-1-methyl-1H-pyrazole-5-carboxamide, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Encinas, L, OKeefe, H, Neu, M, Convery, M.A, McDowell, W, Mendoza-Losana, A, Pages, L.B, Castro-Pichel, J, Evindar, G.
登録日2014-01-28
公開日2014-02-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Encoded Library Technology as a Source of Hits for the Discovery and Lead Optimization of a Potent and Selective Class of Bactericidal Direct Inhibitors of Mycobacterium Tuberculosis Inha.
J.Med.Chem., 57, 2014
4PON
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BU of 4pon by Molmil
The crystal structure of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis
分子名称: Putative RNA methylase
著者Park, S.C, Song, W.S, Yoon, S.I.
登録日2014-02-26
公開日2014-04-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis
Biochem.Biophys.Res.Commun., 446, 2014
4CQE
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BU of 4cqe by Molmil
B-Raf Kinase V600E mutant in complex with a diarylthiazole B-Raf Inhibitor
分子名称: N-{4-[2-(1-cyclopropylpiperidin-4-yl)-4-(3-{[(2,5-difluorophenyl)sulfonyl]amino}-2-fluorophenyl)-1,3-thiazol-5-yl]pyridin-2-yl}acetamide, SLC45A3-BRAF FUSION PROTEIN
著者Casale, E, Fasolini, M, Pulici, M, Traquandi, G, Marchionni, C, Modugno, M, Lupi, R, Amboldi, N, Colombo, N, Corti, L, Gasparri, F, Pastori, W, Scolaro, A, Donati, D, Felder, E, Galvani, A, Isacchi, A, Pesenti, E, Ciomei, M.
登録日2014-02-14
公開日2014-12-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Optimization of Diarylthiazole B-Raf Inhibitors: Identification of a Compound Endowed with High Oral Antitumor Activity, Mitigated Herg Inhibition, and Low Paradoxical Effect.
Chemmedchem, 10, 2015
3ST0
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BU of 3st0 by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: halide-free
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation.
J.Neurosci., 33, 2013
4NPM
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BU of 4npm by Molmil
Crystal structure of Zebrafish ALKBH5 in complex with succinic acid
分子名称: MANGANESE (II) ION, RNA demethylase ALKBH5, SUCCINIC ACID
著者He, C, Chen, W, Zhang, L.
登録日2013-11-21
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Crystal structure of the RNA demethylase ALKBH5 from zebrafish.
Febs Lett., 588, 2014
4NS5
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BU of 4ns5 by Molmil
Crystal structure of human BS69 Bromo-Zinc finger-PWWP
分子名称: ZINC ION, Zinc finger MYND domain-containing protein 11
著者Wang, J.C, Qin, S, Li, F.D, Li, S, Zhang, W, Wu, J.H, Shi, Y.Y.
登録日2013-11-28
公開日2014-04-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human BS69 Bromo-ZnF-PWWP reveals its role in H3K36me3 nucleosome binding.
Cell Res., 24, 2014
4CVR
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BU of 4cvr by Molmil
Structure of Apobacterioferritin Y25F variant
分子名称: BACTERIOFERRITIN, ZINC ION
著者Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
登録日2014-03-29
公開日2014-08-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
3U90
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BU of 3u90 by Molmil
apoferritin: complex with SDS
分子名称: CADMIUM ION, DODECYL SULFATE, Ferritin light chain
著者Liu, R, Bu, W, Xi, J, Mortazavi, S.R, Cheung-Lau, J.C, Dmochowski, I.J, Loll, P.J.
登録日2011-10-17
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Beyond the detergent effect: a binding site for sodium dodecyl sulfate (SDS) in mammalian apoferritin.
Acta Crystallogr.,Sect.D, 68, 2012
4ND9
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BU of 4nd9 by Molmil
The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
分子名称: ABC transporter, substrate binding protein (Proline/glycine/betaine)
著者Nicholls, R, Tkaczuk, K.L, Kagan, O, Chruszcz, M, Domagalski, M.J, Savchenko, A, Joachimiak, A, Murshudov, G, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2013-10-25
公開日2013-12-11
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
To be Published
1Q6L
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BU of 1q6l by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-threonohydroxamate 4-phosphate
分子名称: 3-keto-L-gulonate 6-phosphate decarboxylase, L-THREONOHYDROXAMATE 4-PHOSPHATE, MAGNESIUM ION
著者Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
登録日2003-08-13
公開日2003-10-28
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
4PH6
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BU of 4ph6 by Molmil
Structure of 3-Dehydroquinate Dehydratase from Enterococcus faecalis
分子名称: 3-dehydroquinate dehydratase
著者Xue, B, Cheung, V.W, Yew, W.S, Robinson, R.C.
登録日2014-05-05
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identification of Polyketide Inhibitors Targeting 3-Dehydroquinate Dehydratase in the Shikimate Pathway of Enterococcus faecalis
Plos One, 9, 2014
4CZB
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BU of 4czb by Molmil
Structure of the sodium proton antiporter MjNhaP1 from Methanocaldococcus jannaschii at pH 8.
分子名称: NA(+)/H(+) ANTIPORTER 1, POTASSIUM ION, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Woehlert, D, Paulino, C, Kapotova, E, Kuhlbrandt, W, Yildiz, O.
登録日2014-04-16
公開日2014-12-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献3D Em Map of the Sodium Proton Antiporter Mjnhap1 from Methanocaldococcus Jannaschii
Elife, 3, 2014
4J77
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BU of 4j77 by Molmil
Crystal structure of beta'-COP/hWbp1 complex
分子名称: Coatomer subunit beta', Wbp1
著者Ma, W, Goldberg, J.
登録日2013-02-12
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.756 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
4NWQ
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BU of 4nwq by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group F4132
分子名称: Putative uncharacterized protein PH0671, SULFATE ION, Uncharacterized protein
著者McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
登録日2013-12-06
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
4JQO
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BU of 4jqo by Molmil
Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with citrulline and inorganic phosphate
分子名称: CHLORIDE ION, CITRULLINE, DI(HYDROXYETHYL)ETHER, ...
著者Shabalin, I.G, Winsor, J, Grimshaw, S, Domagalski, M.J, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-03-20
公開日2013-04-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.082 Å)
主引用文献Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
To be Published
4J9L
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BU of 4j9l by Molmil
Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after a C at the primer 3' end (CA/G)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA, DNA polymerase eta, ...
著者Zhao, Y, Gregory, M, Biertumpfel, C, Hua, Y, Hanaoka, F, Yang, W.
登録日2013-02-16
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
4CXW
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BU of 4cxw by Molmil
Crystal structure of human FTO in complex with subfamily-selective inhibitor 12
分子名称: (2E)-4-[N'-(4-benzyl-pyridine-3-carbonyl)-hydrazino]-4-oxo-but-2-enoic acid, ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE FTO, NICKEL (II) ION
著者Toh, D.W, Sun, L, Tan, J, Chen, Y, Lau, L.Z.M, Hong, W, Woon, E.C.Y, Gao, Y.G.
登録日2014-04-09
公開日2014-10-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A strategy based on nucleotide specificity leads to a subfamily-selective and cell-active inhibitor ofN6-methyladenosine demethylase FTO.
Chem Sci, 6, 2015
4NEK
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BU of 4nek by Molmil
Putative enoyl-CoA hydratase/carnithine racemase from Magnetospirillum magneticum AMB-1
分子名称: DI(HYDROXYETHYL)ETHER, Enoyl-CoA hydratase/carnithine racemase
著者Tkaczuk, K.L, Cooper, D.R, Geffken, K, Chapman, H.C, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-10-29
公開日2013-11-27
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Putative enoyl-CoA hydratase/carnithine racemase from Magnetospirillum magneticum AMB-1
To be Published
3U4A
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BU of 3u4a by Molmil
From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
分子名称: CALCIUM ION, JMB19063, beta-D-glucopyranose, ...
著者McAndrew, R.P, Park, J.I, Reindl, W, Friedland, G.D, D'haeseleer, P, Northen, T, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2011-10-07
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献From soil to structure: a novel dimeric family 3-beta--glucosidase isolated from compost using metagenomic analysis
To be Published
4D06
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BU of 4d06 by Molmil
Bacterial chalcone isomerase complexed with naringenin
分子名称: (2E)-3-(4-hydroxyphenyl)-1-(2,4,6-trihydroxyphenyl)prop-2-en-1-one, CHALCONE ISOMERASE, CHLORIDE ION, ...
著者Thomsen, M, Palm, G.J, Hinrichs, W.
登録日2014-04-24
公開日2015-04-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Catalytic Mechanism of the Evolutionarily Unique Bacterial Chalcone Isomerase
Acta Crystallogr.,Sect.D, 71, 2015
3TL8
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BU of 3tl8 by Molmil
The AvrPtoB-BAK1 complex reveals two structurally similar kinaseinteracting domains in a single type III effector
分子名称: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, Effector protein HopAB2
著者Chai, J, Cheng, W, Gao, H.
登録日2011-08-29
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Analysis of Pseudomonas syringae AvrPtoB Bound to Host BAK1 Reveals Two Similar Kinase-Interacting Domains in a Type III Effector.
Cell Host Microbe, 10, 2011
4JUJ
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BU of 4juj by Molmil
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G complexed with human receptor analogue LSTc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-25
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.013 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4NHD
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BU of 4nhd by Molmil
Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1, CALCIUM ION, COENZYME A, ...
著者Hou, J, Zheng, H, Langner, K, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-11-04
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A
To be Published
3THZ
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Human MutSbeta complexed with an IDL of 6 bases (Loop6) and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA Loop6 minus strand, DNA Loop6 plus strand, ...
著者Yang, W.
登録日2011-08-19
公開日2011-12-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Mechanism of mismatch repair revealed by human MutS bound to unpaired DNA loops
Nat.Struct.Mol.Biol., 19, 2012

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