Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 160 results
4FMS
DownloadVisualize
BU of 4fms by Molmil
Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) in complex with glucuronate
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable porin, ...
Authors:van den Berg, B, Eren, E.
Deposit date:2012-06-18
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa.
J.Biol.Chem., 288, 2013
6Z9A
DownloadVisualize
BU of 6z9a by Molmil
Fructo-oligosaccharide transporter BT 1762-63
Descriptor: CHLORIDE ION, MAGNESIUM ION, SusC homolog, ...
Authors:van den Berg, B.
Deposit date:2020-06-03
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6Z34
DownloadVisualize
BU of 6z34 by Molmil
CymD monoaromatic hydrocarbon channel
Descriptor: CymD
Authors:van den Berg, B.
Deposit date:2020-05-19
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Uptake of monoaromatic hydrocarbons during biodegradation by FadL channel-mediated lateral diffusion.
Nat Commun, 11, 2020
6Z38
DownloadVisualize
BU of 6z38 by Molmil
TodX deltaS2S3 mutant monoaromatic hydrocarbon channel
Descriptor: TodX
Authors:van den Berg, B.
Deposit date:2020-05-19
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Uptake of monoaromatic hydrocarbons during biodegradation by FadL channel-mediated lateral diffusion.
Nat Commun, 11, 2020
6Z37
DownloadVisualize
BU of 6z37 by Molmil
TodX monoaromatic hydrocarbon channel deltaS2 mutant
Descriptor: TodX
Authors:van den Berg, B.
Deposit date:2020-05-19
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Uptake of monoaromatic hydrocarbons during biodegradation by FadL channel-mediated lateral diffusion.
Nat Commun, 11, 2020
6Z8I
DownloadVisualize
BU of 6z8i by Molmil
Fructo-oligosaccharide transporter BT 1762-63
Descriptor: MAGNESIUM ION, PHOSPHATE ION, SusC homolog, ...
Authors:van den Berg, B.
Deposit date:2020-06-02
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
6ZAZ
DownloadVisualize
BU of 6zaz by Molmil
Fructo-oligosaccharide transporter BT 1762-63
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:van den Berg, B.
Deposit date:2020-06-06
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
4V3H
DownloadVisualize
BU of 4v3h by Molmil
Crystal structure of CymA from Klebsiella oxytoca
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA PROTEIN, NITRATE ION
Authors:van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
Deposit date:2014-10-18
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4V3G
DownloadVisualize
BU of 4v3g by Molmil
Crystal structure of CymA from Klebsiella oxytoca
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CYMA PROTEIN
Authors:van den Berg, B, Bhamidimarri, S.P, Kleinekathoefer, U, Winterhalter, M.
Deposit date:2014-10-18
Release date:2015-06-03
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.513 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
6EJH
DownloadVisualize
BU of 6ejh by Molmil
Crystal structure of the G343C mutant of Candida albicans Mep2
Descriptor: Ammonium transporter
Authors:van den Berg, B, van den Berg, B.
Deposit date:2017-09-21
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of the G343C mutant of Candida albicans Mep2
To Be Published
5AID
DownloadVisualize
BU of 5aid by Molmil
Crystal structure of the Mep2 mutant delta442 from Candida albicans
Descriptor: MEP2
Authors:van den Berg, B, Chembath, A, Rutherford, J.
Deposit date:2015-02-12
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5AH3
DownloadVisualize
BU of 5ah3 by Molmil
Crystal structure of the Mep2 mutant R452D,S453D from Candida albicans
Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, MEP2
Authors:van den Berg, B, Chembath, A, Rutherford, J.
Deposit date:2015-02-04
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
7NL4
DownloadVisualize
BU of 7nl4 by Molmil
OsNIP2;1 silicon transporter from rice
Descriptor: Aquaporin NIP2-1, CADMIUM ION
Authors:van den Berg, B.
Deposit date:2021-02-22
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Silicic Acid Uptake by Higher Plants.
J.Mol.Biol., 433, 2021
3KVN
DownloadVisualize
BU of 3kvn by Molmil
Crystal structure of the full-length autotransporter EstA from Pseudomonas aeruginosa
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Esterase estA
Authors:van den Berg, B.
Deposit date:2009-11-30
Release date:2010-01-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structure of a full-length autotransporter.
J.Mol.Biol., 396, 2010
8A60
DownloadVisualize
BU of 8a60 by Molmil
Crystal structure of FhuA in complex with the superinfection exclusion lipoprotein Llp
Descriptor: Ferrichrome outer membrane transporter/phage receptor, Lytic conversion lipoprotein
Authors:van den Berg, B.
Deposit date:2022-06-16
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Structural basis for host recognition and superinfection exclusion by bacteriophage T5.
Proc.Natl.Acad.Sci.USA, 119, 2022
6EJ6
DownloadVisualize
BU of 6ej6 by Molmil
Crystal structure of the N240A mutant of Candida albicans Mep2
Descriptor: Ammonium transporter
Authors:van den Berg, B.
Deposit date:2017-09-20
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the N240A mutant of Candida albicans Mep2
To Be Published
6EHC
DownloadVisualize
BU of 6ehc by Molmil
OmpUdeltaN (N-terminus deletion mutant of OmpU), outer membrane protein of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein U
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6EHD
DownloadVisualize
BU of 6ehd by Molmil
OmpT (in-vitro folded), an outer membrane protein of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, OmpT protein
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6ENE
DownloadVisualize
BU of 6ene by Molmil
OmpF orthologue from Enterobacter cloacae (OmpE35)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein (Porin), SULFATE ION, ...
Authors:van den Berg, B, Abellon-Ruiz, J, Basle, A.
Deposit date:2017-10-04
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins.
Acs Infect Dis., 4, 2018
6EHF
DownloadVisualize
BU of 6ehf by Molmil
OmpT (in-vitro folded), an outer membrane protein Vibrio cholerae (trimer form)
Descriptor: CALCIUM ION, OmpT protein
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6EHB
DownloadVisualize
BU of 6ehb by Molmil
OmpU, an outer membrane protein, of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein U
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
6EHE
DownloadVisualize
BU of 6ehe by Molmil
OmpTdeltaL8 (loop L8 deletion mutant of OmpT), an outer membrane protein of Vibrio cholerae
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ACETATE ION, MAGNESIUM ION, ...
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-13
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
5FUF
DownloadVisualize
BU of 5fuf by Molmil
Crystal structure of the Mep2 mutant S453D from Candida albicans
Descriptor: AMMONIUM TRANSPORTER, DECYL-BETA-D-MALTOPYRANOSIDE
Authors:van den Berg, B, Chembath, A, Jefferies, D, Basle, A, Khalid, S, Rutherford, J.
Deposit date:2016-01-26
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.066 Å)
Cite:Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5OYK
DownloadVisualize
BU of 5oyk by Molmil
Outer-membrane expressed OmpT of Vibrio cholerae
Descriptor: Gram-negative porin family protein
Authors:van den berg, B, Pathania, M.
Deposit date:2017-09-11
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
5O77
DownloadVisualize
BU of 5o77 by Molmil
Klebsiella pneumoniae OmpK35
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, OmpK35
Authors:van den berg, B, Pathania, M, Zahn, M.
Deposit date:2017-06-08
Release date:2018-06-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins.
Acs Infect Dis., 4, 2018

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon