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PDB: 33 件
2RTS
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Chitin binding domain1
分子名称: chitinase
著者Uegaki, K.
登録日2013-08-19
公開日2014-04-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the chitin-binding domain 1 (ChBD1) of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Biochem., 155, 2014
2CWR
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Crystal structure of chitin biding domain of chitinase from Pyrococcus furiosus
分子名称: chitinase
著者Uegaki, K, Nakamura, T, Ishikawa, K, Matsumura, H.
登録日2005-06-24
公開日2006-07-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Tertiary structure and carbohydrate recognition by the chitin-binding domain of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Mol.Biol., 381, 2008
1IRG
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INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES
分子名称: INTERFERON REGULATORY FACTOR-2
著者Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y.
登録日1997-11-25
公開日1998-03-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1IRF
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INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: INTERFERON REGULATORY FACTOR-2
著者Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y.
登録日1997-11-24
公開日1998-01-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1F2R
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NMR STRUCTURE OF THE HETERODIMERIC COMPLEX BETWEEN CAD DOMAINS OF CAD AND ICAD
分子名称: CASPASE-ACTIVATED DNASE, INHIBITOR OF CASPASE-ACTIVATED DNASE
著者Otomo, T, Sakahira, H, Uegaki, K, Nagata, S, Yamazaki, T.
登録日2000-05-29
公開日2000-06-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the heterodimeric complex between CAD domains of CAD and ICAD.
Nat.Struct.Biol., 7, 2000
7FBW
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Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
分子名称: NICKEL (II) ION, Predicted xylanase/chitin deacetylase
著者Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nishiya, Y, Nakamura, T.
登録日2021-07-13
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.
Acta Crystallogr.,Sect.F, 77, 2021
7Y51
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Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis TTE0866 delta100 mutant
分子名称: GLYCEROL, NICKEL (II) ION, Predicted xylanase/chitin deacetylase
著者Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nakamura, T, Nishiya, Y.
登録日2022-06-16
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Functional analysis of the N-terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.
Febs Open Bio, 12, 2022
1C9F
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NMR STRUCTURE OF THE CAD DOMAIN OF CASPASE-ACTIVATED DNASE
分子名称: CASPASE-ACTIVATED DNASE
著者Yamazaki, T, Uegaki, K.
登録日1999-08-02
公開日2000-02-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the CAD domain of caspase-activated DNase and interaction with the CAD domain of its inhibitor.
J.Mol.Biol., 297, 2000
1X0R
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Thioredoxin Peroxidase from Aeropyrum pernix K1
分子名称: 1,2-ETHANEDIOL, Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Inoue, T, Matsumura, H, Kobayashi, A, Hagihara, Y, Uegaki, K, Ataka, M, Kai, Y, Ishikawa, K.
登録日2005-03-28
公開日2005-12-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of thioredoxin peroxidase from aerobic hyperthermophilic archaeon Aeropyrum pernix K1
Proteins, 62, 2006
5B2E
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N,N'-diacetylchitobiose deacetylase from Pyrococcus horikoshii complexed with its inhibitor MPG (acetate-containing condition)
分子名称: 2-deoxy-2-{[(S)-hydroxy(methyl)phosphoryl]amino}-beta-D-glucopyranose, HEXANE-1,6-DIOL, Putative uncharacterized protein PH0499, ...
著者Nakamura, T, Niiyama, M, Ida, K, Uegaki, K.
登録日2016-01-15
公開日2016-08-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Substrate recognition of N,N'-diacetylchitobiose deacetylase from Pyrococcus horikoshii
J.Struct.Biol., 195, 2016
5B2F
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N,N'-diacetylchitobiose deacetylase from Pyrococcus horikoshii complexed with its inhibitor MPG (phosphate-containing condition)
分子名称: 2-deoxy-2-{[(S)-hydroxy(methyl)phosphoryl]amino}-beta-D-glucopyranose, Putative uncharacterized protein PH0499, ZINC ION
著者Nakamura, T, Niiyama, M, Ida, K, Uegaki, K.
登録日2016-01-15
公開日2016-08-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate recognition of N,N'-diacetylchitobiose deacetylase from Pyrococcus horikoshii
J.Struct.Biol., 195, 2016
4XM0
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N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the absence of cadmium
分子名称: Uncharacterized protein, ZINC ION
著者Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
登録日2015-01-14
公開日2015-06-10
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
4XM2
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N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium
分子名称: Uncharacterized protein, ZINC ION
著者Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
登録日2015-01-14
公開日2015-06-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
4XLZ
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N,N'-diacetylchitobiose deacetylase (SeMet derivative) from Pyrococcus furiosus in the presence of cadmium
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CADMIUM ION, CHLORIDE ION, ...
著者Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
登録日2015-01-14
公開日2015-06-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
4XM1
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N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium
分子名称: CADMIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
登録日2015-01-14
公開日2015-06-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
2DSK
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Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus
分子名称: GLYCEROL, SULFATE ION, chitinase
著者Nakamura, T, Mine, S, Hagihara, Y, Ishikawa, K, Uegaki, K.
登録日2006-06-30
公開日2007-02-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the catalytic domain of the hyperthermophilic chitinase from Pyrococcus furiosus
ACTA CRYSTALLOGR.,SECT.F, 63, 2007
3AK1
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Superoxide dismutase from Aeropyrum pernix K1, apo-form
分子名称: 1,2-ETHANEDIOL, Superoxide dismutase [Mn/Fe]
著者Nakamura, T, Uegaki, K.
登録日2010-06-30
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Febs J., 278, 2011
3AK2
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Superoxide dismutase from Aeropyrum pernix K1, Mn-bound form
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, Superoxide dismutase [Mn/Fe]
著者Nakamura, T, Uegaki, K.
登録日2010-06-30
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Febs J., 278, 2011
3AK3
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Superoxide dismutase from Aeropyrum pernix K1, Fe-bound form
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Superoxide dismutase [Mn/Fe]
著者Nakamura, T, Uegaki, K.
登録日2010-06-30
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Febs J., 278, 2011
3A4X
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Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase, GLYCEROL, ...
著者Tsuji, H, Nishimura, S, Inui, T, Ishikawa, K, Nakamura, T, Uegaki, K.
登録日2009-07-22
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Kinetic and crystallographic analyses of the catalytic domain of chitinase from Pyrococcus furiosus- the role of conserved residues in the active site
Febs J., 277, 2010
3A4W
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Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, MAGNESIUM ION, ...
著者Tsuji, H, Nishimura, S, Inui, T, Ishikawa, K, Nakamura, T, Uegaki, K.
登録日2009-07-22
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Kinetic and crystallographic analyses of the catalytic domain of chitinase from Pyrococcus furiosus- the role of conserved residues in the active site
Febs J., 277, 2010
3VP8
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Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p
分子名称: General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
5XBR
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Peroxiredoxin from Pyrococcus horikoshii (sulfonic acid form)
分子名称: GLYCEROL, Peroxiredoxin
著者Nakamura, T, Uegaki, K.
登録日2017-03-21
公開日2018-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Alteration of molecular assembly of peroxiredoxins from hyperthermophilic archaea
J. Biochem., 162, 2017
5XQY
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Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 8
分子名称: Immunoglobulin kappa variable 1D-33
著者Mine, S, Nakamura, T, Uegaki, K, Hamada, D.
登録日2017-06-07
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Heat-induced native dimerization prevents amyloid formation by variable domain from immunoglobulin light-chain REI
FEBS J., 284, 2017
3VP9
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Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p mutant
分子名称: 1,4-DIETHYLENE DIOXIDE, General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012

 

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