5Y33
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5Z7Y
| Crystal structure of Striga hermonthica HTL7 (ShHTL7) | Descriptor: | 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, Hyposensitive to light 7, ... | Authors: | Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M. | Deposit date: | 2018-01-30 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga. Nat Commun, 9, 2018
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2D7J
| Crystal Structure Analysis of Glutamine Amidotransferase from Pyrococcus horikoshii OT3 | Descriptor: | GMP synthase [glutamine-hydrolyzing] subunit A | Authors: | Maruoka, S, Lee, W.C, Kamo, M, Kudo, N, Nagata, K, Tanokura, M. | Deposit date: | 2005-11-21 | Release date: | 2006-11-21 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.89 Å) | Cite: | Crystal structure of glutamine amidotransferase from Pyrococcus horikoshii OT3 PROC.JPN.ACAD.,SER.B, 81, 2005
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5Z7Z
| Crystal structure of Striga hermonthica Dwarf14 (ShD14) | Descriptor: | 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Dwarf 14, ... | Authors: | Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M. | Deposit date: | 2018-01-30 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.978 Å) | Cite: | Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga. Nat Commun, 9, 2018
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5Z7W
| Crystal structure of Striga hermonthica HTL1 (ShHTL1) | Descriptor: | GLYCEROL, Hyposensitive to light 1, MAGNESIUM ION, ... | Authors: | Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M. | Deposit date: | 2018-01-30 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.657 Å) | Cite: | Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga. Nat Commun, 9, 2018
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5ZB8
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5ZHS
| Crystal structure of OsD14 in complex with covalently bound KK052 | Descriptor: | (4-phenylpiperazin-1-yl)(1H-1,2,3-triazol-1-yl)methanone, Strigolactone esterase D14 | Authors: | Hirabayashi, K, Miyakawa, T, Tanokura, M. | Deposit date: | 2018-03-13 | Release date: | 2018-11-21 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.49 Å) | Cite: | Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses. Mol Plant, 12, 2019
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5ZHT
| Crystal structure of OsD14 in complex with covalently bound KK073 | Descriptor: | (1H-1,2,3-triazol-1-yl){4-[4-(trifluoromethyl)phenyl]piperazin-1-yl}methanone, Strigolactone esterase D14 | Authors: | Hirabayashi, K, Miyakawa, T, Tanokura, M. | Deposit date: | 2018-03-13 | Release date: | 2018-11-21 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.532 Å) | Cite: | Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses. Mol Plant, 12, 2019
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5YZ7
| Crystal structure of OsD14 in complex with D-ring-opened 7'-carba-4BD | Descriptor: | (2Z,4S)-5-(4-bromophenyl)-4-hydroxy-2-methylpent-2-enoic acid, Strigolactone esterase D14 | Authors: | Hirabayashi, K, Jiang, K, Xu, Y, Miyakawa, T, Asami, T, Tanokura, M. | Deposit date: | 2017-12-13 | Release date: | 2018-05-30 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.898 Å) | Cite: | Rationally Designed Strigolactone Analogs as Antagonists of the D14 Receptor. Plant Cell Physiol., 59, 2018
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5ZHR
| Crystal structure of OsD14 in complex with covalently bound KK094 | Descriptor: | (2,3-dihydro-1H-indol-1-yl)(1H-1,2,3-triazol-1-yl)methanone, Strigolactone esterase D14 | Authors: | Hirabayashi, K, Miyakawa, T, Tanokura, M. | Deposit date: | 2018-03-13 | Release date: | 2018-11-21 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses. Mol Plant, 12, 2019
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5Z7X
| Crystal structure of Striga hermonthica HTL4 (ShHTL4) | Descriptor: | 1,2-ETHANEDIOL, Hyposensitive to light 4, MAGNESIUM ION | Authors: | Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M. | Deposit date: | 2018-01-30 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.055 Å) | Cite: | Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga. Nat Commun, 9, 2018
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5ZD4
| Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA | Descriptor: | 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*CP*AP*CP*AP*CP*GP*TP*GP*TP*GP*AP*AP*A)-3'), Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1, ... | Authors: | Nosaki, S, Miyakawa, T, Xu, Y, Nakamura, A, Hirabayashi, K, Tanokura, M. | Deposit date: | 2018-02-22 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.17 Å) | Cite: | Structural basis for brassinosteroid response by BIL1/BZR1. Nat Plants, 4, 2018
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2Z1N
| Crystal structure of APE0912 from Aeropyrum pernix K1 | Descriptor: | SODIUM ION, dehydrogenase | Authors: | Ichimura, T, Yamamura, A, Mimoto, F, Ohtsuka, J, Miyazono, K, Okai, M, Kamo, M, Lee, W.-C, Nagata, K, Tanokura, M. | Deposit date: | 2007-05-10 | Release date: | 2008-03-18 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | A unique catalytic triad revealed by the crystal structure of APE0912, a short-chain dehydrogenase/reductase family protein from Aeropyrum pernix K1 Proteins, 70, 2008
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2D5I
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3AAD
| Structure of the histone chaperone CIA/ASF1-double bromodomain complex linking histone modifications and site-specific histone eviction | Descriptor: | Histone chaperone ASF1A, SULFATE ION, Transcription initiation factor TFIID subunit 1 | Authors: | Akai, Y, Adachi, N, Hayashi, Y, Eitoku, M, Sano, N, Natsume, R, Kudo, N, Tanokura, M, Senda, T, Horikoshi, M. | Deposit date: | 2009-11-16 | Release date: | 2010-04-28 | Last modified: | 2017-10-11 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Structure of the histone chaperone CIA/ASF1-double bromodomain complex linking histone modifications and site-specific histone eviction Proc.Natl.Acad.Sci.USA, 107, 2010
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3A76
| The crystal structure of LinA | Descriptor: | GLYCEROL, Gamma-hexachlorocyclohexane dehydrochlorinase, SPERMIDINE | Authors: | Okai, M, Kubota, K, Fukuda, M, Nagata, Y, Nagata, K, Tanokura, M. | Deposit date: | 2009-09-15 | Release date: | 2010-09-15 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | Crystal structure of g-hexachlorocyclohexane dehydrochlorinase LinA from Sphingobium japonicum UT26 J.Mol.Biol., 2010
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2E0Q
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2ZUA
| Crystal structure of nucleoside diphosphate kinase from Haloarcula quadrata | Descriptor: | Nucleoside diphosphate kinase | Authors: | Ichimura, T, Yamamura, A, Ohtsuka, J, Miyazono, K, Okai, M, Nagata, K, Tanokura, M. | Deposit date: | 2008-10-15 | Release date: | 2009-08-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.59 Å) | Cite: | Molecular mechanism of distinct salt-dependent enzyme activity of two halophilic nucleoside diphosphate kinases Biophys.J., 96, 2009
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2YYS
| Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8 | Descriptor: | GLYCEROL, Proline iminopeptidase-related protein | Authors: | Okai, M, Miyauchi, Y, Ebihara, A, Lee, W.C, Nagata, K, Tanokura, M. | Deposit date: | 2007-05-01 | Release date: | 2008-02-26 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8 Proteins, 70, 2008
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2ZBC
| Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7. | Descriptor: | 83aa long hypothetical transcriptional regulator asnC, ISOLEUCINE | Authors: | Miyazono, K, Tsujimura, M, Kawarabayasi, Y, Tanokura, M. | Deposit date: | 2007-10-19 | Release date: | 2008-03-11 | Last modified: | 2017-10-11 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7 Proteins, 71, 2008
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3AI2
| The crystal structure of L-sorbose reductase from Gluconobacter frateurii complexed with NADPH | Descriptor: | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-sorbose reductase | Authors: | Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M. | Deposit date: | 2010-05-07 | Release date: | 2011-02-09 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose J.Mol.Biol., 407, 2011
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3AK4
| Crystal structure of NADH-dependent quinuclidinone reductase from agrobacterium tumefaciens | Descriptor: | NADH-dependent quinuclidinone reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | Authors: | Miyakawa, T, Kataoka, M, Takeshita, D, Nomoto, F, Nagata, K, Shimizu, S, Tanokura, M. | Deposit date: | 2010-07-07 | Release date: | 2011-07-13 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of NADH-dependent quinuclidinone reductase from Agrobacterium tumefaciens To be Published
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3AI3
| The crystal structure of L-Sorbose reductase from Gluconobacter frateurii complexed with NADPH and L-sorbose | Descriptor: | L-sorbose, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-sorbose reductase, ... | Authors: | Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M. | Deposit date: | 2010-05-07 | Release date: | 2011-02-09 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose J.Mol.Biol., 407, 2011
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3AI1
| The crystal structure of L-sorbose reductase from Gluconobacter frateurii complexed with NADPH and L-sorbose reveals the structure bases of its catalytic mechanism and high substrate selectivity | Descriptor: | NADPH-sorbose reductase | Authors: | Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M. | Deposit date: | 2010-05-06 | Release date: | 2011-02-09 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.38 Å) | Cite: | The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose J.Mol.Biol., 407, 2011
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1V5Y
| Binding of coumarins to NAD(P)H:FMN oxidoreductase | Descriptor: | 4-HYDROXY-2H-CHROMEN-2-ONE, FLAVIN MONONUCLEOTIDE, Major NAD(P)H-flavin oxidoreductase | Authors: | Kobori, T, Koike, H, Sasaki, H, Zenno, S, Saigo, K, Tanokura, M. | Deposit date: | 2003-11-26 | Release date: | 2005-03-08 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Binding of coumarins to NAD(P)H:FMN oxidoreductase To be Published
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