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PDB: 211 件
1ZR7
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Solution structure of the first WW domain of FBP11
分子名称: huntingtin-interacting protein HYPA/FBP11
著者Kato, Y, Hino, Y, Tanokura, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-19
公開日2006-05-30
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure and binding specificity of FBP11/HYPA WW domain as Group-II/III
Proteins, 63, 2006
5XOD
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Crystal structure of human Smad2-Ski complex
分子名称: Mothers against decapentaplegic homolog 2, Ski oncogene
著者Miyazono, K, Moriwaki, S, Ito, T, Tanokura, M.
登録日2017-05-27
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Hydrophobic patches on SMAD2 and SMAD3 determine selective binding to cofactors
Sci Signal, 11, 2018
5XOC
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Crystal structure of human Smad3-FoxH1 complex
分子名称: Mothers against decapentaplegic homolog 3, Thioredoxin 1,Forkhead box protein H1
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2017-05-27
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Hydrophobic patches on SMAD2 and SMAD3 determine selective binding to cofactors
Sci Signal, 11, 2018
2D37
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The Crystal Structure of Flavin Reductase HpaC complexed with NAD+
分子名称: FLAVIN MONONUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, hypothetical NADH-dependent FMN oxidoreductase
著者Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M.
登録日2005-09-26
公開日2006-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
2D36
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The Crystal Structure of Flavin Reductase HpaC
分子名称: FLAVIN MONONUCLEOTIDE, hypothetical NADH-dependent FMN oxidoreductase
著者Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M.
登録日2005-09-26
公開日2006-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
2D38
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The Crystal Structure of Flavin Reductase HpaC complexed with NADP+
分子名称: FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, hypothetical NADH-dependent FMN oxidoreductase
著者Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M.
登録日2005-09-26
公開日2006-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
5ZB8
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Crystal structure of the novel lesion-specific endonuclease PfuEndoQ from Pyrococcus furiosus
分子名称: PfuEndoQ, SAMARIUM (III) ION, ZINC ION
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2018-02-10
公開日2018-04-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the novel lesion-specific endonuclease PfuEndoQ from Pyrococcus furiosus.
Nucleic Acids Res., 46, 2018
6AGZ
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Crystal structure of Old Yellow Enzyme from Pichia sp. AKU4542
分子名称: FLAVIN MONONUCLEOTIDE, Old Yellow Enzyme
著者Horita, S, Kataoka, M, Kitamura, N, Nakagawa, T, Miyakawa, T, Ohtsuka, J, Nagata, K, Shimizu, S, Tanokura, M.
登録日2018-08-15
公開日2019-06-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of different substrate preferences of two old yellow enzymes from yeasts in the asymmetric reduction of enone compounds.
Biosci.Biotechnol.Biochem., 83, 2019
5ZOJ
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Crystal structure of human SMAD2-MAN1 complex
分子名称: Inner nuclear membrane protein Man1, Mothers against decapentaplegic homolog 2
著者Miyazono, K, Ohno, Y, Ito, T, Tanokura, M.
登録日2018-04-13
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.794 Å)
主引用文献Structural basis for receptor-regulated SMAD recognition by MAN1
Nucleic Acids Res., 46, 2018
2ZUA
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Crystal structure of nucleoside diphosphate kinase from Haloarcula quadrata
分子名称: Nucleoside diphosphate kinase
著者Ichimura, T, Yamamura, A, Ohtsuka, J, Miyazono, K, Okai, M, Nagata, K, Tanokura, M.
登録日2008-10-15
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Molecular mechanism of distinct salt-dependent enzyme activity of two halophilic nucleoside diphosphate kinases
Biophys.J., 96, 2009
5ZOK
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Crystal structure of human SMAD1-MAN1 complex.
分子名称: Inner nuclear membrane protein Man1, Mothers against decapentaplegic homolog 1
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2018-04-13
公開日2018-10-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis for receptor-regulated SMAD recognition by MAN1
Nucleic Acids Res., 46, 2018
2D7J
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Crystal Structure Analysis of Glutamine Amidotransferase from Pyrococcus horikoshii OT3
分子名称: GMP synthase [glutamine-hydrolyzing] subunit A
著者Maruoka, S, Lee, W.C, Kamo, M, Kudo, N, Nagata, K, Tanokura, M.
登録日2005-11-21
公開日2006-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of glutamine amidotransferase from Pyrococcus horikoshii OT3
PROC.JPN.ACAD.,SER.B, 81, 2005
5Z7Y
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Crystal structure of Striga hermonthica HTL7 (ShHTL7)
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, Hyposensitive to light 7, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2018-01-30
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5Z7Z
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Crystal structure of Striga hermonthica Dwarf14 (ShD14)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Dwarf 14, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2018-01-30
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.978 Å)
主引用文献Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5ZD4
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Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*CP*AP*CP*AP*CP*GP*TP*GP*TP*GP*AP*AP*A)-3'), Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1, ...
著者Nosaki, S, Miyakawa, T, Xu, Y, Nakamura, A, Hirabayashi, K, Tanokura, M.
登録日2018-02-22
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural basis for brassinosteroid response by BIL1/BZR1.
Nat Plants, 4, 2018
2GXG
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Crystal structure of EmrR homolog from hyperthermophilic archaea Sulfolobus tokodaii strain7
分子名称: 146aa long hypothetical transcriptional regulator
著者Miyazono, K, Tsujimura, M, Kawarabayasi, Y, Tanokura, M.
登録日2006-05-08
公開日2007-03-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of archaeal homolog of multi drug resistance repressor protein, EmrR, from hyperthermophilic archaea Sulfolobus tokodaii strain7
To be Published
2D5I
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The crystal structure of AzoR (Azo Reductase) from Escherichia coli
分子名称: Azo Reductase, FLAVIN MONONUCLEOTIDE, GLYCEROL
著者Ito, K, Tanokura, M.
登録日2005-11-02
公開日2006-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Three-dimensional structure of AzoR from Escherichia coli. An oxidereductase conserved in microorganisms
J.Biol.Chem., 281, 2006
2Z1N
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Crystal structure of APE0912 from Aeropyrum pernix K1
分子名称: SODIUM ION, dehydrogenase
著者Ichimura, T, Yamamura, A, Mimoto, F, Ohtsuka, J, Miyazono, K, Okai, M, Kamo, M, Lee, W.-C, Nagata, K, Tanokura, M.
登録日2007-05-10
公開日2008-03-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A unique catalytic triad revealed by the crystal structure of APE0912, a short-chain dehydrogenase/reductase family protein from Aeropyrum pernix K1
Proteins, 70, 2008
3AAD
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Structure of the histone chaperone CIA/ASF1-double bromodomain complex linking histone modifications and site-specific histone eviction
分子名称: Histone chaperone ASF1A, SULFATE ION, Transcription initiation factor TFIID subunit 1
著者Akai, Y, Adachi, N, Hayashi, Y, Eitoku, M, Sano, N, Natsume, R, Kudo, N, Tanokura, M, Senda, T, Horikoshi, M.
登録日2009-11-16
公開日2010-04-28
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the histone chaperone CIA/ASF1-double bromodomain complex linking histone modifications and site-specific histone eviction
Proc.Natl.Acad.Sci.USA, 107, 2010
2E0Q
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Crystal structure of K53E thioredoxin from Sulfolobus tokodaii strain7
分子名称: thioredoxin
著者Ming, H, Tanokura, M.
登録日2006-10-11
公開日2007-10-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystal structure of thioredoxin domain of ST2123 from thermophilic archaea Sulfolobus tokodaii strain7
Proteins, 69, 2007
3A76
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The crystal structure of LinA
分子名称: GLYCEROL, Gamma-hexachlorocyclohexane dehydrochlorinase, SPERMIDINE
著者Okai, M, Kubota, K, Fukuda, M, Nagata, Y, Nagata, K, Tanokura, M.
登録日2009-09-15
公開日2010-09-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of g-hexachlorocyclohexane dehydrochlorinase LinA from Sphingobium japonicum UT26
J.Mol.Biol., 2010
2ZBC
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Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7.
分子名称: 83aa long hypothetical transcriptional regulator asnC, ISOLEUCINE
著者Miyazono, K, Tsujimura, M, Kawarabayasi, Y, Tanokura, M.
登録日2007-10-19
公開日2008-03-11
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7
Proteins, 71, 2008
3AI2
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The crystal structure of L-sorbose reductase from Gluconobacter frateurii complexed with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-sorbose reductase
著者Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M.
登録日2010-05-07
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose
J.Mol.Biol., 407, 2011
3AI3
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The crystal structure of L-Sorbose reductase from Gluconobacter frateurii complexed with NADPH and L-sorbose
分子名称: L-sorbose, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-sorbose reductase, ...
著者Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M.
登録日2010-05-07
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose
J.Mol.Biol., 407, 2011
3WGB
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Crystal structure of aeromonas jandaei L-allo-threonine aldolase
分子名称: GLYCINE, L-allo-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
著者Qin, H.M, Imai, F.L, Miyakawa, T, Kataoka, M, Okai, M, Ohtsuka, J, Hou, F, Nagata, K, Shimizu, S, Tanokura, M.
登録日2013-08-03
公開日2014-07-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献L-allo-Threonine aldolase with an H128Y/S292R mutation from Aeromonas jandaei DK-39 reveals the structural basis of changes in substrate stereoselectivity.
Acta Crystallogr.,Sect.D, 70, 2014

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