4YOT
 
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4YOX
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4YOU
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5B0H
 | | CRYSTAL STRUCTURE OF HUMAN LEUKOCYTE CELL-DERIVED CHEMOTAXIN 2 | | Descriptor: | Leukocyte cell-derived chemotaxin-2, SULFATE ION, ZINC ION | | Authors: | Zheng, H, Miyakawa, T, Sawano, Y, Tanokura, M. | | Deposit date: | 2015-10-29 | | Release date: | 2016-07-06 | | Last modified: | 2020-02-26 | | Method: | X-RAY DIFFRACTION (1.94 Å) | | Cite: | Crystal Structure of Human Leukocyte Cell-derived Chemotaxin 2 (LECT2) Reveals a Mechanistic Basis of Functional Evolution in a Mammalian Protein with an M23 Metalloendopeptidase Fold
J.Biol.Chem., 291, 2016
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1V4B
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5ZHS
 | | Crystal structure of OsD14 in complex with covalently bound KK052 | | Descriptor: | (4-phenylpiperazin-1-yl)(1H-1,2,3-triazol-1-yl)methanone, Strigolactone esterase D14 | | Authors: | Hirabayashi, K, Miyakawa, T, Tanokura, M. | | Deposit date: | 2018-03-13 | | Release date: | 2018-11-21 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.49 Å) | | Cite: | Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses.
Mol Plant, 12, 2019
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5Z7W
 | | Crystal structure of Striga hermonthica HTL1 (ShHTL1) | | Descriptor: | GLYCEROL, Hyposensitive to light 1, MAGNESIUM ION, ... | | Authors: | Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M. | | Deposit date: | 2018-01-30 | | Release date: | 2018-08-29 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.657 Å) | | Cite: | Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
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5ZHT
 | | Crystal structure of OsD14 in complex with covalently bound KK073 | | Descriptor: | (1H-1,2,3-triazol-1-yl){4-[4-(trifluoromethyl)phenyl]piperazin-1-yl}methanone, Strigolactone esterase D14 | | Authors: | Hirabayashi, K, Miyakawa, T, Tanokura, M. | | Deposit date: | 2018-03-13 | | Release date: | 2018-11-21 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.532 Å) | | Cite: | Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses.
Mol Plant, 12, 2019
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5YZ7
 | | Crystal structure of OsD14 in complex with D-ring-opened 7'-carba-4BD | | Descriptor: | (2Z,4S)-5-(4-bromophenyl)-4-hydroxy-2-methylpent-2-enoic acid, Strigolactone esterase D14 | | Authors: | Hirabayashi, K, Jiang, K, Xu, Y, Miyakawa, T, Asami, T, Tanokura, M. | | Deposit date: | 2017-12-13 | | Release date: | 2018-05-30 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.898 Å) | | Cite: | Rationally Designed Strigolactone Analogs as Antagonists of the D14 Receptor.
Plant Cell Physiol., 59, 2018
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5ZHR
 | | Crystal structure of OsD14 in complex with covalently bound KK094 | | Descriptor: | (2,3-dihydro-1H-indol-1-yl)(1H-1,2,3-triazol-1-yl)methanone, Strigolactone esterase D14 | | Authors: | Hirabayashi, K, Miyakawa, T, Tanokura, M. | | Deposit date: | 2018-03-13 | | Release date: | 2018-11-21 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.45 Å) | | Cite: | Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses.
Mol Plant, 12, 2019
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5Z7X
 | | Crystal structure of Striga hermonthica HTL4 (ShHTL4) | | Descriptor: | 1,2-ETHANEDIOL, Hyposensitive to light 4, MAGNESIUM ION | | Authors: | Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M. | | Deposit date: | 2018-01-30 | | Release date: | 2018-08-29 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.055 Å) | | Cite: | Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
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2DVY
 | | Crystal structure of restriction endonucleases PabI | | Descriptor: | Restriction endonuclease PabI | | Authors: | Miyazono, K, Watanabe, M, Kamo, M, Sawasaki, T, Nagata, K, Endo, Y, Tanokura, M, Kobayashi, I. | | Deposit date: | 2006-08-01 | | Release date: | 2007-05-08 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (3 Å) | | Cite: | Novel protein fold discovered in the PabI family of restriction enzymes
Nucleic Acids Res., 35, 2007
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1EQK
 | | SOLUTION STRUCTURE OF ORYZACYSTATIN-I, A CYSTEINE PROTEINASE INHIBITOR OF THE RICE, ORYZA SATIVA L. JAPONICA | | Descriptor: | ORYZACYSTATIN-I | | Authors: | Nagata, K, Kudo, N, Abe, K, Arai, S, Tanokura, M. | | Deposit date: | 2000-04-05 | | Release date: | 2001-01-10 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Three-dimensional solution structure of oryzacystatin-I, a cysteine proteinase inhibitor of the rice, Oryza sativa L. japonica.
Biochemistry, 39, 2000
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2D37
 | | The Crystal Structure of Flavin Reductase HpaC complexed with NAD+ | | Descriptor: | FLAVIN MONONUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, hypothetical NADH-dependent FMN oxidoreductase | | Authors: | Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M. | | Deposit date: | 2005-09-26 | | Release date: | 2006-05-30 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
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2D36
 | | The Crystal Structure of Flavin Reductase HpaC | | Descriptor: | FLAVIN MONONUCLEOTIDE, hypothetical NADH-dependent FMN oxidoreductase | | Authors: | Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M. | | Deposit date: | 2005-09-26 | | Release date: | 2006-05-30 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
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2D38
 | | The Crystal Structure of Flavin Reductase HpaC complexed with NADP+ | | Descriptor: | FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, hypothetical NADH-dependent FMN oxidoreductase | | Authors: | Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M. | | Deposit date: | 2005-09-26 | | Release date: | 2006-05-30 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.05 Å) | | Cite: | Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
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1V46
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1V5Z
 | | Binding of coumarins to NAD(P)H:FMN oxidoreductase | | Descriptor: | (2E)-3-(2-HYDROXYPHENYL)ACRYLIC ACID, FLAVIN MONONUCLEOTIDE, Major NAD(P)H-flavin oxidoreductase | | Authors: | Kobori, T, Koike, H, Sasaki, H, Zenno, S, Saigo, K, Tanokura, M. | | Deposit date: | 2003-11-26 | | Release date: | 2005-03-08 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Binding of coumarins to NAD(P)H:FMN oxidoreductase
To be Published
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1V5Y
 | | Binding of coumarins to NAD(P)H:FMN oxidoreductase | | Descriptor: | 4-HYDROXY-2H-CHROMEN-2-ONE, FLAVIN MONONUCLEOTIDE, Major NAD(P)H-flavin oxidoreductase | | Authors: | Kobori, T, Koike, H, Sasaki, H, Zenno, S, Saigo, K, Tanokura, M. | | Deposit date: | 2003-11-26 | | Release date: | 2005-03-08 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Binding of coumarins to NAD(P)H:FMN oxidoreductase
To be Published
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1V3Z
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1VDI
 | | Solution structure of actin-binding domain of troponin in Ca2+-free state | | Descriptor: | Troponin I, fast skeletal muscle | | Authors: | Murakami, K, Yumoto, F, Ohki, S, Yasunaga, T, Tanokura, M, Wakabayashi, T. | | Deposit date: | 2004-03-22 | | Release date: | 2005-09-06 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Structural Basis for Ca(2+)-regulated Muscle Relaxation at Interaction Sites of Troponin with Actin and Tropomyosin
J.Mol.Biol., 352, 2005
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1VDJ
 | | Solution structure of actin-binding domain of troponin in Ca2+-bound state | | Descriptor: | Troponin I, fast skeletal muscle | | Authors: | Murakami, K, Yumoto, F, Ohki, S, Yasunaga, T, Tanokura, M, Wakabayashi, T. | | Deposit date: | 2004-03-22 | | Release date: | 2005-09-06 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Structural Basis for Ca(2+)-regulated Muscle Relaxation at Interaction Sites of Troponin with Actin and Tropomyosin
J.Mol.Biol., 352, 2005
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2ZUA
 | | Crystal structure of nucleoside diphosphate kinase from Haloarcula quadrata | | Descriptor: | Nucleoside diphosphate kinase | | Authors: | Ichimura, T, Yamamura, A, Ohtsuka, J, Miyazono, K, Okai, M, Nagata, K, Tanokura, M. | | Deposit date: | 2008-10-15 | | Release date: | 2009-08-25 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.59 Å) | | Cite: | Molecular mechanism of distinct salt-dependent enzyme activity of two halophilic nucleoside diphosphate kinases
Biophys.J., 96, 2009
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2D7J
 | | Crystal Structure Analysis of Glutamine Amidotransferase from Pyrococcus horikoshii OT3 | | Descriptor: | GMP synthase [glutamine-hydrolyzing] subunit A | | Authors: | Maruoka, S, Lee, W.C, Kamo, M, Kudo, N, Nagata, K, Tanokura, M. | | Deposit date: | 2005-11-21 | | Release date: | 2006-11-21 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.89 Å) | | Cite: | Crystal structure of glutamine amidotransferase from Pyrococcus horikoshii OT3
PROC.JPN.ACAD.,SER.B, 81, 2005
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3WGB
 | | Crystal structure of aeromonas jandaei L-allo-threonine aldolase | | Descriptor: | GLYCINE, L-allo-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE] | | Authors: | Qin, H.M, Imai, F.L, Miyakawa, T, Kataoka, M, Okai, M, Ohtsuka, J, Hou, F, Nagata, K, Shimizu, S, Tanokura, M. | | Deposit date: | 2013-08-03 | | Release date: | 2014-07-09 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | L-allo-Threonine aldolase with an H128Y/S292R mutation from Aeromonas jandaei DK-39 reveals the structural basis of changes in substrate stereoselectivity.
Acta Crystallogr.,Sect.D, 70, 2014
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