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PDB: 409 件
2ZOM
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Crystal structure of CutA1 from Oryza sativa
分子名称: GLYCEROL, Protein CutA, chloroplast, ...
著者Kezuka, Y, Bagautdinov, B, Katoh, S, Ohtake, Y, Yutani, K, Nonaka, T, Katoh, E.
登録日2008-05-23
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Crystal structure of CutA1 from Oryza sativa
To be Published
5YNA
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BU of 5yna by Molmil
Crystal structure of Pullulanase from Klebsiella pneumoniae complex at 1 mM alpha-cyclodextrin
分子名称: ACETATE ION, CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), ...
著者Saka, N, Iwamoto, H, Takahashi, N, Mizutani, K, Mikami, B.
登録日2017-10-24
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Elucidation of the mechanism of interaction between Klebsiella pneumoniae pullulanase and cyclodextrin
Acta Crystallogr D Struct Biol, 74, 2018
5YNC
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Crystal structure of Pullulanase from Klebsiella pneumoniae complex at 1 mM beta-cyclodextrin
分子名称: ACETATE ION, CALCIUM ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
著者Saka, N, Iwamoto, H, Takahashi, N, Mizutani, K, Mikami, B.
登録日2017-10-24
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Elucidation of the mechanism of interaction between Klebsiella pneumoniae pullulanase and cyclodextrin
Acta Crystallogr D Struct Biol, 74, 2018
1V5X
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BU of 1v5x by Molmil
Crystal structure of Phosphoribosyl anthranilate isomerase from Thermus Thermophilus
分子名称: Phosphoribosylanthranilate isomerase
著者Taka, J, Kunishima, N, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-26
公開日2003-12-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Stabilization due to dimer formation of phosphoribosyl anthranilate isomerase from Thermus thermophilus HB8: X-ray Analysis and DSC experiments.
J.Biochem.(Tokyo), 137, 2005
3AA9
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Crystal Structure Analysis of the Mutant CutA1 (E61V) from E. coli
分子名称: Divalent-cation tolerance protein cutA
著者Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
登録日2009-11-12
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
1IWF
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BU of 1iwf by Molmil
Solution structure of the N-terminal domain of pig gastric H/K-ATPase
分子名称: gastric H/K-ATPase
著者Fujitani, N, Kanagawa, M, Aizawa, T, Ohkubo, T, Kaya, S, Demura, M, Kawano, K, Taniguchi, K, Nitta, K.
登録日2002-05-06
公開日2002-11-27
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure determination and conformational change induced by tyrosine phosphorylation of the N-terminal domain of the alpha-chain of pig gastric H+/K+-ATPase
Biochem.Biophys.Res.Commun., 300, 2003
2DZV
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BU of 2dzv by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D146A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZP
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BU of 2dzp by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D17N) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZX
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Structure of mutant tryptophan synthase alpha-subunit (E131-132A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
5CL2
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BU of 5cl2 by Molmil
Crystal structure of Spo0M, sporulation control protein, from Bacillus subtilis.
分子名称: SODIUM ION, Sporulation-control protein spo0M
著者Sonoda, Y, Mizutani, K, Mikami, B.
登録日2015-07-16
公開日2015-12-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Spo0M, a sporulation-control protein from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 71, 2015
2DZT
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BU of 2dzt by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D110A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZU
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BU of 2dzu by Molmil
Structure of mutant tryptophan synthase alpha-subunit (D110N) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZS
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BU of 2dzs by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E103A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2DZW
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BU of 2dzw by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E244A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-30
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2E09
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BU of 2e09 by Molmil
Structure of mutant tryptophan synthase alpha-subunit (E74A) from a hyperthermophile, Pyrococcus furiosus
分子名称: Tryptophan synthase alpha chain
著者Ogasahara, K, Yamagata, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-10-02
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of mutant tryptophan synthase alpha-subunits from a hyperthermophile, Pyrococcus furiosus
To be Published
2EO8
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BU of 2eo8 by Molmil
Crystal structure of a mutant pyrrolidone carboxyl peptidase (A199P) from P. furiosus
分子名称: Pyrrolidone-carboxylate peptidase
著者Sakamoto, K, Okazaki, N, Yutani, K.
登録日2007-03-29
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a mutant pyrrolidone carboxyl peptidase (A199P) from P. furiosus
To be Published
3VR2
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BU of 3vr2 by Molmil
Crystal structure of nucleotide-free A3B3 complex from Enterococcus hirae V-ATPase [eA3B3]
分子名称: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
著者Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
登録日2012-04-03
公開日2013-01-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR4
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BU of 3vr4 by Molmil
Crystal structure of Enterococcus hirae V1-ATPase [eV1]
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Saijo, S, Arai, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
登録日2012-04-03
公開日2013-01-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.172 Å)
主引用文献Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR6
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Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1]
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ...
著者Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
登録日2012-04-03
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR3
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BU of 3vr3 by Molmil
Crystal structure of AMP-PNP bound A3B3 complex from Enterococcus hirae V-ATPase [bA3B3]
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ...
著者Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
登録日2012-04-03
公開日2013-01-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR5
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BU of 3vr5 by Molmil
Crystal structure of nucleotide-free Enterococcus hirae V1-ATPase [eV1(L)]
分子名称: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
著者Saijo, S, Arai, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
登録日2012-04-03
公開日2013-01-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3WA3
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Crystal structure of copper amine oxidase from arthrobacter globiformis in N2 condition
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
著者Murakawa, T, Hayashi, H, Sunami, T, Kurihara, K, Tamada, T, Kuroki, R, Suzuki, M, Tanizawa, K, Okajima, T.
登録日2013-04-22
公開日2013-09-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
3WA2
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High resolution crystal structure of copper amine oxidase from arthrobacter globiformis
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
著者Murakawa, T, Hayashi, H, Sunami, T, Kurihara, K, Tamada, T, Kuroki, R, Suzuki, M, Tanizawa, K, Okajima, T.
登録日2013-04-22
公開日2013-09-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
2OHE
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Structural and mutational analysis of tRNA-Intron splicing endonuclease from Thermoplasma acidophilum DSM 1728
分子名称: tRNA-splicing endonuclease
著者Kim, Y.K, Mizutani, K, Rhee, K.H, Lee, W.H, Park, S.Y, Hwang, K.Y.
登録日2007-01-10
公開日2007-11-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Mutational Analysis of tRNA Intron-Splicing Endonuclease from Thermoplasma acidophilum DSM 1728: Catalytic Mechanism of tRNA Intron-Splicing Endonucleases
J.Bacteriol., 189, 2007
1WMN
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Crystal structure of topaquinone-containing amine oxidase activated by cobalt ion
分子名称: COBALT (II) ION, Phenylethylamine oxidase
著者Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K.
登録日2004-07-13
公開日2005-08-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase
Biochemistry, 44, 2005

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