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PDB: 409 件

2ZWB
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Neutron crystal structure of wild type human lysozyme in D2O
分子名称: Lysozyme C
著者Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N.
登録日2008-12-02
公開日2009-12-08
最終更新日2023-11-01
実験手法NEUTRON DIFFRACTION (1.8 Å)
主引用文献Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme
To be Published
2ZPI
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Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 440min at 293K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.491 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPB
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nitrosylated Fe-type nitrile hydratase
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-09
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
7YRK
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Crystal structure of the hen egg lysozyme-2-oxidobenzylidene-threoninato-copper (II) complex
分子名称: (6~{S})-6-[(1~{R})-1-oxidanylethyl]-2,4-dioxa-7$l^{4}-aza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(13),7,9,11-tetraen-5-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Unno, M, Furuya, T, Kitanishi, K, Akitsu, T.
登録日2022-08-10
公開日2023-05-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献A novel hybrid protein composed of superoxide-dismutase-active Cu(II) complex and lysozyme.
Sci Rep, 13, 2023
3AH6
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Remarkable improvement of the heat stability of CutA1 from E.coli by rational protein designing
分子名称: Divalent-cation tolerance protein cutA
著者Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
登録日2010-04-15
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
2Z9X
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Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-L-alanine
分子名称: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, ALANINE, Aspartate aminotransferase, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
1V8E
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Thermus thermophilus HB8
分子名称: putative glycerophosphoryl diester phosphodiesterase
著者Ishijima, J, Ida, K, Yutani, K, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-05
公開日2005-01-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of glycerophosphoryl diester phosphodiesterase from Thermus thermophilus HB8
To be Published
1V8Z
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X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus
分子名称: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, Tryptophan synthase beta chain 1
著者Hioki, Y, Ogasahara, K, Lee, S.J, Ma, J, Ishida, M, Yamagata, Y, Matsuura, Y, Ota, M, Kuramitsu, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-15
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure of the tryptophan synthase beta subunit from the hyperthermophile Pyrococcus furiosus. Investigation of stabilization factors
Eur.J.Biochem., 271, 2004
2ZPG
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Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 120min at 293K
分子名称: FE (III) ION, MAGNESIUM ION, Nitrile hydratase subunit alpha, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2Z9V
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Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine
分子名称: 4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL, Aspartate aminotransferase, GLYCEROL, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZPH
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Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 340min at 293K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2Z9U
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Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution
分子名称: Aspartate aminotransferase, GLYCEROL, SULFATE ION
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZPF
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Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 18min at 293K
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.482 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPE
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nitrosylated Fe-type nitrile hydratase with tert-butylisonitrile
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-10
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2DH6
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Crystal structure of E. coli Apo-TrpB
分子名称: SULFATE ION, tryptophan synthase beta subunit
著者Nishio, K, Morimoto, Y, Ogasahara, K, Yasuoka, N, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Large conformational changes in the Escherichia coli tryptophan synthase beta(2) subunit upon pyridoxal 5'-phosphate binding
Febs J., 277, 2010
2DH5
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Crystal structure of E. coli Holo-TrpB
分子名称: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, ...
著者Nishio, K, Morimoto, Y, Ogasahara, K, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Large conformational changes in the Escherichia coli tryptophan synthase beta(2) subunit upon pyridoxal 5'-phosphate binding
Febs J., 277, 2010
5XCA
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Crystal structure of GH45 endoglucanase EG27II D137A mutant in complex with cellobiose
分子名称: Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B.
登録日2017-03-22
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean.
Acta Crystallogr D Struct Biol, 75, 2019
5XC8
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Crystal structure of GH45 endoglucanase EG27II at pH5.5, in complex with cellobiose
分子名称: Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B.
登録日2017-03-22
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean.
Acta Crystallogr D Struct Biol, 75, 2019
5XBX
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BU of 5xbx by Molmil
Crystal structure of GH45 endoglucanase EG27II in complex with cellobiose
分子名称: Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B.
登録日2017-03-21
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean.
Acta Crystallogr D Struct Biol, 75, 2019
5XC4
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Crystal structure of GH45 endoglucanase EG27II at pH4.0, in complex with cellobiose
分子名称: Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B.
登録日2017-03-22
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean.
Acta Crystallogr D Struct Biol, 75, 2019
5XC9
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Crystal structure of GH45 endoglucanase EG27II at pH8.0, in complex with cellobiose
分子名称: Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B.
登録日2017-03-22
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean.
Acta Crystallogr D Struct Biol, 75, 2019
5XBU
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Crystal structure of GH45 endoglucanase EG27II in apo-form
分子名称: Endo-beta-1,4-glucanase
著者Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B.
登録日2017-03-21
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean.
Acta Crystallogr D Struct Biol, 75, 2019
1IWC
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TFE-induded structure of the N-terminal domain of pig gastric H/K-ATPase
分子名称: gastric H/K-ATPase
著者Fujitani, N, Kanagawa, M, Aizawa, T, Ohkubo, T, Kaya, S, Demura, M, Kawano, K, Taniguchi, K, Nitta, K.
登録日2002-05-02
公開日2002-11-27
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure determination and conformational change induced by tyrosine phosphorylation of the N-terminal domain of the alpha-chain of pig gastric H+/K+-ATPase
Biochem.Biophys.Res.Commun., 300, 2003
6J33
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Crystal structure of ligand-free of PulA from Klebsiella pneumoniae
分子名称: ACETATE ION, CALCIUM ION, MAGNESIUM ION, ...
著者Saka, N, Iwamoto, H, Takahashi, N, Mizutani, K, Mikami, B.
登録日2019-01-09
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.297 Å)
主引用文献Relationship between the induced-fit loop and the activity of Klebsiella pneumoniae pullulanase.
Acta Crystallogr D Struct Biol, 75, 2019
6J34
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Crystal Structure of maltotriose-complex of PulA from Klebsiella pneumoniae
分子名称: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
著者Saka, N, Iwamoto, H, Takahashi, N, Mizutani, K, Mikami, B.
登録日2019-01-09
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Relationship between the induced-fit loop and the activity of Klebsiella pneumoniae pullulanase.
Acta Crystallogr D Struct Biol, 75, 2019

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