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PDB: 1036 results

2RRU
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BU of 2rru by Molmil
Solution structure of the UBA omain of p62 and its interaction with ubiquitin
Descriptor: Sequestosome-1
Authors:Isogai, S, Morimoto, D, Arita, K, Unzai, S, Tenno, T, Hasegawa, J, Sou, Y, Komatsu, M, Tanaka, K, Shirakawa, M, Tochio, H.
Deposit date:2011-06-09
Release date:2011-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Crystal structure of the UBA omain of p62 and its interaction with ubiquitin
To be Published
5ZE9
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BU of 5ze9 by Molmil
Crystal structure of AMP-PNP bound mutant A3B3 complex from Enterococcus hirae V-ATPase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MAGNESIUM ION, ...
Authors:Maruyama, S, Suzuki, K, Sasaki, H, Mizutani, K, Saito, Y, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Ichiro, Y, Murata, T.
Deposit date:2018-02-27
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Metastable asymmetrical structure of a shaftless V1motor.
Sci Adv, 5, 2019
1MH6
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BU of 1mh6 by Molmil
Solution Structure of the Transposon Tn5-encoding Bleomycin-binding Protein, BLMT
Descriptor: BLEOMYCIN RESISTANCE PROTEIN
Authors:Kumagai, T, Ohtani, K, Tsuboi, Y, Koike, T, Sugiyama, M.
Deposit date:2002-08-19
Release date:2003-02-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the transposon Tn5-encoding bleomycin-binding protein complexed with an activated bleomycin analogue.
To be published
5YY3
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BU of 5yy3 by Molmil
Crystal structure of AsqI
Descriptor: Uncharacterized protein AsqI
Authors:Hara, K, Hashimoto, H, Kishimoto, S, Watanabe, K.
Deposit date:2017-12-07
Release date:2018-08-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Enzymatic one-step ring contraction for quinolone biosynthesis.
Nat Commun, 9, 2018
5IAU
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BU of 5iau by Molmil
A C69-family cysteine dipeptidase from Lactobacillus farciminis
Descriptor: 1,2-ETHANEDIOL, Dipeptidase
Authors:Kono, R, Watanabe, K.
Deposit date:2016-02-21
Release date:2017-03-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.781 Å)
Cite:A C69-family cysteine dipeptidase from Lactobacillus farciminis; substrate recognition mechanism and autoproteolytic mechanism in enzyme maturation
To Be Published
1CKF
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BU of 1ckf by Molmil
T52A MUTANT HUMAN LYSOZYME
Descriptor: PROTEIN (LYSOZYME), SODIUM ION
Authors:Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
Deposit date:1999-04-22
Release date:1999-04-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ6
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BU of 1cj6 by Molmil
T11A MUTANT HUMAN LYSOZYME
Descriptor: PROTEIN (LYSOZYME), SODIUM ION
Authors:Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
Deposit date:1999-04-22
Release date:1999-04-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ8
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BU of 1cj8 by Molmil
T40A MUTANT HUMAN LYSOZYME
Descriptor: PROTEIN (LYSOZYME), SODIUM ION
Authors:Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
Deposit date:1999-04-22
Release date:1999-04-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ7
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BU of 1cj7 by Molmil
T11V MUTANT HUMAN LYSOZYME
Descriptor: PROTEIN (LYSOZYME), SODIUM ION
Authors:Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
Deposit date:1999-04-22
Release date:1999-04-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1DI3
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BU of 1di3 by Molmil
ROLE OF AMINO ACID RESIDUES AT TURNS IN THE CONFORMATIONAL STABILITY AND FOLDING OF HUMAN LYSOZYME
Descriptor: LYSOZYME C, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1999-11-28
Release date:1999-12-08
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of amino acid residues at turns in the conformational stability and folding of human lysozyme.
Biochemistry, 39, 2000
1DI4
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BU of 1di4 by Molmil
ROLE OF AMINO ACID RESIDUES AT TURNS IN THE CONFORMATIONAL STABILITY AND FOLDING OF HUMAN LYSOZYME
Descriptor: LYSOZYME C, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1999-11-29
Release date:1999-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of amino acid residues at turns in the conformational stability and folding of human lysozyme.
Biochemistry, 39, 2000
5INX
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BU of 5inx by Molmil
A C69-family cysteine dipeptidase in complex with Met and Ala from Lactobacillus farciminis
Descriptor: ALANINE, Dipeptidase, METHIONINE
Authors:Kono, R, Watanabe, K.
Deposit date:2016-03-08
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.681 Å)
Cite:A C69-family cysteine dipeptidase from Lactobacillus farciminis; substrate recognition mechanism and autoproteolytic mechanism in enzyme maturation
To Be Published
6KFG
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BU of 6kfg by Molmil
Undocked INX-6 hemichannel in detergent
Descriptor: Innexin-6
Authors:Burendei, B, Shinozaki, R, Watanabe, M, Terada, T, Tani, K, Fujiyoshi, Y, Oshima, A.
Deposit date:2019-07-07
Release date:2020-02-12
Last modified:2020-03-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structures of undocked innexin-6 hemichannels in phospholipids.
Sci Adv, 6, 2020
1CKC
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BU of 1ckc by Molmil
T43A MUTANT HUMAN LYSOZYME
Descriptor: PROTEIN (LYSOZYME), SODIUM ION
Authors:Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
Deposit date:1999-04-22
Release date:1999-04-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
7CPK
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BU of 7cpk by Molmil
Xylanase R from Bacillus sp. TAR-1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Endo-1,4-beta-xylanase A, ...
Authors:Kuwata, K, Suzuki, M, Takita, T, Nakatani, K, Li, T, Katano, Y, Kojima, K, Mizutani, K, Mikami, B, Yatsunami, R, Nakamura, S, Yasukawa, K.
Deposit date:2020-08-07
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Insight into the mechanism of thermostabilization of GH10 xylanase from Bacillus sp. strain TAR-1 by the mutation of S92 to E.
Biosci.Biotechnol.Biochem., 85, 2021
1X23
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BU of 1x23 by Molmil
Crystal structure of ubch5c
Descriptor: Ubiquitin-conjugating enzyme E2 D3
Authors:Nakanishi, M, Teshima, N, Mizushima, T, Murata, S, Tanaka, K, Yamane, T.
Deposit date:2005-04-19
Release date:2005-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of ubch5c
To be Published
1OUG
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BU of 1oug by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V2A MUTANT
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1996-08-23
Release date:1997-02-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
1OUB
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BU of 1oub by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V100A MUTANT
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1996-08-23
Release date:1997-02-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
1OUH
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BU of 1ouh by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V74A MUTANT
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1996-08-23
Release date:1997-02-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
1OUF
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BU of 1ouf by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V130A MUTANT
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1996-08-23
Release date:1997-02-12
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
1WZV
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BU of 1wzv by Molmil
Crystal Structure of UbcH8
Descriptor: Ubiquitin-conjugating enzyme E2 L6
Authors:Mizushima, T, Suzuki, M, Teshima, N, Yamane, T, Murata, S, Tanaka, K.
Deposit date:2005-03-10
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of UbcH8
To be Published
1X25
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BU of 1x25 by Molmil
Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)
Descriptor: Hypothetical UPF0076 protein ST0811
Authors:Miyakawa, T, Lee, W.C, Hatano, K, Kato, Y, Sawano, Y, Miyazono, K, Nagata, K, Tanokura, M.
Deposit date:2005-04-20
Release date:2006-02-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7
Proteins, 62, 2006
2Z84
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BU of 2z84 by Molmil
Insights from crystal and solution structures of mouse UfSP1
Descriptor: Ufm1-specific protease 1
Authors:Ha, B.H, Ahn, H.C, Kang, S.H, Tanaka, K, Chung, C.H, Kim, E.E.
Deposit date:2007-08-30
Release date:2008-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for Ufm1 processing by UfSP1
J. Biol. Chem., 283, 2008
4TKC
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BU of 4tkc by Molmil
Japanese Marasmius oreades lectin complexed with mannose
Descriptor: GLYCEROL, Mannose recognizing lectin, alpha-D-mannopyranose, ...
Authors:Noma, Y, Shimokawa, M, Maeganeku, C, Motoshima, H, Watanabe, K, Minami, Y, Yagi, F.
Deposit date:2014-05-26
Release date:2015-06-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Structure of Japanese Marasmius oreades lectin complexed with mannose.
To Be Published
1WZW
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BU of 1wzw by Molmil
Crystal Structure of UbcH8
Descriptor: Ubiquitin-conjugating enzyme E2 L6
Authors:Mizushima, T, Suzuki, M, Teshima, N, Yamane, T, Murata, S, Tanaka, K.
Deposit date:2005-03-10
Release date:2005-03-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of UbcH8
To be Published

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