6LL8
| Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mg-PNP form | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, FLUORIDE ION, ... | 著者 | Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K. | 登録日 | 2019-12-21 | 公開日 | 2020-03-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase. Sci Rep, 10, 2020
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1WXS
| Solution Structure of Ufm1, a ubiquitin-fold modifier | 分子名称: | Ubiquitin-fold Modifier 1 | 著者 | Sasakawa, H, Sakata, E, Yamaguchi, Y, Komatsu, M, Tatsumi, K, Kominami, E, Tanaka, K, Kato, K. | 登録日 | 2005-02-01 | 公開日 | 2006-04-18 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1 Biochem.Biophys.Res.Commun., 343, 2006
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3FE0
| X-ray crystal structure of wild type human lysozyme in D2O | 分子名称: | Lysozyme C | 著者 | Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N. | 登録日 | 2008-11-27 | 公開日 | 2009-12-08 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme hydrogen To be Published
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6LL7
| Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mn-activated form | 分子名称: | CALCIUM ION, Inorganic pyrophosphatase, MANGANESE (II) ION | 著者 | Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K. | 登録日 | 2019-12-21 | 公開日 | 2020-03-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase. Sci Rep, 10, 2020
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1XPA
| SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE | 分子名称: | XPA, ZINC ION | 著者 | Ikegami, T, Kuraoka, I, Saijo, M, Kodo, N, Kyogoku, Y, Morikawa, K, Tanaka, K, Shirakawa, M. | 登録日 | 1998-07-06 | 公開日 | 1999-07-22 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the DNA- and RPA-binding domain of the human repair factor XPA. Nat.Struct.Biol., 5, 1998
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8W7D
| Crystal structure of EcPPAT-FR901483 complex | 分子名称: | Amidophosphoribosyltransferase, [(1S,3S,6S,7S,8R,9S)-6-[(4-methoxyphenyl)methyl]-3-(methylamino)-7-oxidanyl-5-azatricyclo[6.3.1.0^1,5]dodecan-9-yl] dihydrogen phosphate | 著者 | Hara, K, Hashimoto, H, Nakahara, M, Sato, M, Watanabe, K. | 登録日 | 2023-08-30 | 公開日 | 2023-12-13 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.81 Å) | 主引用文献 | Uncommon Arrangement of Self-resistance Allows Biosynthesis of de novo Purine Biosynthesis Inhibitor that Acts as an Immunosuppressor. J.Am.Chem.Soc., 145, 2023
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1EQ5
| CRYSTAL STRUCTURES OF SALT BRIDGE MUTANTS OF HUMAN LYSOZYME | 分子名称: | LYSOZYME, SODIUM ION | 著者 | Takano, K, Tsuchimori, K, Yamagata, Y, Yutani, K. | 登録日 | 2000-04-03 | 公開日 | 2000-04-19 | 最終更新日 | 2021-11-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of salt bridges near the surface of a protein to the conformational stability. Biochemistry, 39, 2000
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1EQE
| CRYSTAL STRUCTURES OF SALT BRIDGE MUTANTS OF HUMAN LYSOZYME | 分子名称: | LYSOZYME, SODIUM ION | 著者 | Takano, K, Tsuchimori, K, Yamagata, Y, Yutani, K. | 登録日 | 2000-04-04 | 公開日 | 2000-04-19 | 最終更新日 | 2021-11-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of salt bridges near the surface of a protein to the conformational stability. Biochemistry, 39, 2000
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5IAU
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5IMH
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5INR
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5IMG
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5FHI
| Crystallographic structure of PsoE without Co | 分子名称: | GLUTATHIONE, Glutathione S-transferase, putative | 著者 | Hara, K, Hashimoto, H, Yamamoto, T, Tsunematsu, Y, Watanabe, K. | 登録日 | 2015-12-22 | 公開日 | 2016-04-20 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.41 Å) | 主引用文献 | Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis. Angew. Chem. Int. Ed. Engl., 55, 2016
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7BR0
| Crystal structure of AclR, a thioredoxin oxidoreductase fold protein carrying the CXXH catalytic motif | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, Pyr_redox_2 domain-containing protein | 著者 | Hara, K, Hashimoto, H, Maeda, N, Watanabe, K, Hertweck, C, Tsunematsu, Y. | 登録日 | 2020-03-26 | 公開日 | 2020-12-23 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.003 Å) | 主引用文献 | Specialized Flavoprotein Promotes Sulfur Migration and Spiroaminal Formation in Aspirochlorine Biosynthesis. J.Am.Chem.Soc., 143, 2021
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5F8B
| Crystallographic Structure of PsoE with Co | 分子名称: | (5~{S},8~{S},9~{R})-2-[(~{E})-hex-1-enyl]-8-methoxy-3-methyl-9-oxidanyl-8-(phenylcarbonyl)-1-oxa-7-azaspiro[4.4]non-2-ene-4,6-dione, COBALT (II) ION, GLUTATHIONE, ... | 著者 | Hara, K, Hashimoto, H, Yamamoto, T, Tsunematsu, Y, Watanabe, K. | 登録日 | 2015-12-09 | 公開日 | 2016-04-20 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | 主引用文献 | Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis. Angew. Chem. Int. Ed. Engl., 55, 2016
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1GEV
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1GF5
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1GF7
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1EQ4
| CRYSTAL STRUCTURES OF SALT BRIDGE MUTANTS OF HUMAN LYSOZYME | 分子名称: | LYSOZYME, SODIUM ION | 著者 | Takano, K, Tsuchimori, K, Yamagata, Y, Yutani, K. | 登録日 | 2000-04-03 | 公開日 | 2000-04-19 | 最終更新日 | 2021-11-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of salt bridges near the surface of a protein to the conformational stability. Biochemistry, 39, 2000
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5INX
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1GF0
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1GF6
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1GF3
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1IRU
| Crystal Structure of the mammalian 20S proteasome at 2.75 A resolution | 分子名称: | 20S proteasome, MAGNESIUM ION | 著者 | Unno, M, Mizushima, T, Morimoto, Y, Tomisugi, Y, Tanaka, K, Yasuoka, N, Tsukihara, T. | 登録日 | 2001-10-24 | 公開日 | 2002-05-22 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | The structure of the mammalian 20S proteasome at 2.75 A resolution. Structure, 10, 2002
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1UMI
| Structural basis of sugar-recognizing ubiquitin ligase | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, F-box only protein 2 | 著者 | Mizushima, T, Hirao, T, Yoshida, Y, Lee, S.J, Chiba, T, Iwai, K, Yamaguchi, Y, Kato, K, Tsukihara, T, Tanaka, K. | 登録日 | 2003-10-01 | 公開日 | 2004-04-06 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis of sugar-recognizing ubiquitin ligase. Nat.Struct.Mol.Biol., 11, 2004
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