Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 144 件

6QSE
DownloadVisualize
BU of 6qse by Molmil
Crystal structure of Pizza6S in the presence of Anderson-Evans (TEW)
分子名称: 6-tungstotellurate(VI), Pizza6S
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
6QSF
DownloadVisualize
BU of 6qsf by Molmil
Crystal structure of Pizza6S in the presence of Keggin (STA)
分子名称: Keggin (STA), Pizza6S
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
6QSD
DownloadVisualize
BU of 6qsd by Molmil
Crystal structure of Pizza6S
分子名称: Pizza6S, SULFATE ION
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
6QSH
DownloadVisualize
BU of 6qsh by Molmil
Crystal structure of the hybrid bioinorganic complex of Pizza6S linked by the 1:2 Ce-substituted Keggin
分子名称: 1:2 Ce-substituted Keggin, Pizza6S
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
6QSG
DownloadVisualize
BU of 6qsg by Molmil
Crystal structure of the hybrid bioinorganic complex of Pizza6S and Keggin (STA)
分子名称: Keggin (STA), Pizza6S
著者Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
3WMU
DownloadVisualize
BU of 3wmu by Molmil
The structure of an anti-cancer lectin mytilec apo-form from the mussel Mytilus galloprovincialis
分子名称: GLYCEROL, Lectin
著者Terada, D, Kawai, F, Noguchi, H, Unzai, S, Park, S.-Y, Ozeki, Y, Tame, J.R.H.
登録日2013-11-27
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types
Sci Rep, 6, 2016
3WW8
DownloadVisualize
BU of 3ww8 by Molmil
Crystal structure of the computationally designed Pizza3 protein
分子名称: GLYCEROL, Pizza3 protein, SULFATE ION
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ZCN
DownloadVisualize
BU of 4zcn by Molmil
Crystal structure of nvPizza2-S16S58
分子名称: IODIDE ION, SULFATE ION, nvPizza2-S16S58
著者Voet, A.R.D, Noguchi, H, Addy, C, Zhang, K.Y.J, Tame, J.R.H.
登録日2015-04-16
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of nvPizza2-S16S58
To Be Published
1RKM
DownloadVisualize
BU of 1rkm by Molmil
STRUCTURE OF OPPA
分子名称: OLIGO-PEPTIDE BINDING PROTEIN
著者Sleigh, S.H, Tame, J.R.H, Wilkinson, A.J.
登録日1997-03-25
公開日1997-07-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Peptide binding in OppA, the crystal structures of the periplasmic oligopeptide binding protein in the unliganded form and in complex with lysyllysine.
Biochemistry, 36, 1997
5CHB
DownloadVisualize
BU of 5chb by Molmil
Crystal structure of nvPizza2-S16H58 coordinating a CdCl2 nanocrystal
分子名称: CADMIUM ION, CHLORIDE ION, SULFATE ION, ...
著者Voet, A.R.D, Noguchi, H, Addy, C, Zhang, K.Y.J, Tame, J.R.H.
登録日2015-07-10
公開日2015-07-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein
Angew.Chem.Int.Ed.Engl., 54, 2015
5Z01
DownloadVisualize
BU of 5z01 by Molmil
Native Escherichia coli L,D-carboxypeptidase A (LdcA)
分子名称: MAGNESIUM ION, Murein tetrapeptide carboxypeptidase
著者Meyer, K, Tame, J.R.H.
登録日2017-12-18
公開日2018-04-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018
6AB9
DownloadVisualize
BU of 6ab9 by Molmil
The crystal structure of the relaxed state of Nonlabens marinus Rhodopsin 3
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.-H, Ohki, M, Park, J.-H, Jin, Z, Lee, W, Liu, H, Tame, J.R.H, Shibayama, N, Park, S.-Y.
登録日2018-07-20
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The pumping mechanism of NM-R3, a light-driven cyanobacterial chloride importer in the rhodopsin family
To Be Published
6ABA
DownloadVisualize
BU of 6aba by Molmil
The crystal structure of the photoactivated state of Nonlabens marinus Rhodopsin 3
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.-H, Ohki, M, Park, J.-H, Jin, Z, Lee, W, Liu, H, Tame, J.R.H, Shibayama, N, Park, S.-Y.
登録日2018-07-20
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献The pumping mechanism of NM-R3, a light-driven marine bacterial chloride importer in the rhodopsin family
To Be Published
5Z03
DownloadVisualize
BU of 5z03 by Molmil
Mutant (S106A) Escherichia coli L,D-carboxypeptidase A (LdcA)
分子名称: Murein tetrapeptide carboxypeptidase
著者Meyer, K, Tame, J.R.H.
登録日2017-12-18
公開日2018-04-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018
5XG5
DownloadVisualize
BU of 5xg5 by Molmil
Crystal structure of Mitsuba-1 with bound NAcGal
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MITSUBA-1
著者Terada, D, Voet, A.R.D, Kamata, K, Zhang, K.Y.J, Tame, J.R.H.
登録日2017-04-12
公開日2017-07-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity.
Sci Rep, 7, 2017
3AEH
DownloadVisualize
BU of 3aeh by Molmil
Integral membrane domain of autotransporter Hbp
分子名称: Hemoglobin-binding protease hbp autotransporter
著者Tajima, N, Park, S.-Y, Tame, J.R.H.
登録日2010-02-04
公開日2010-07-07
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel intein-like autoproteolytic mechanism in autotransporter proteins.
J.Mol.Biol., 402, 2010
7VUR
DownloadVisualize
BU of 7vur by Molmil
Crystal structure of AlleyCat9 with calcium but no inhibitor
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, AlleyCat, CALCIUM ION
著者Margheritis, E, Takahashi, K, Korendovych, I.V, Tame, J.R.H.
登録日2021-11-04
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献NMR-guided directed evolution.
Nature, 610, 2022
7VUC
DownloadVisualize
BU of 7vuc by Molmil
Myoglobin mutant L29I/H64G/V68A
分子名称: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Takahashi, K, Korendovych, I.V, Tame, J.R.H.
登録日2021-11-02
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献NMR-guided directed evolution.
Nature, 610, 2022
8Y6D
DownloadVisualize
BU of 8y6d by Molmil
Norovirus GII.10 P domain and 2'-FL (tablet)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'-FL (tablet), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (tablet)
To Be Published
8Y5V
DownloadVisualize
BU of 8y5v by Molmil
GII.4 Sydney PD and 2'-FL
分子名称: 1,2-ETHANEDIOL, GII.4 Sydney PD in complex with 2'-FL (powder), alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-01
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献GII.4 Sydney PD and 2'-FL
To Be Published
8Y6C
DownloadVisualize
BU of 8y6c by Molmil
Norovirus GII.10 P domain and 2'-FL (powder)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'FL (powder), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (powder)
To Be Published
3A3J
DownloadVisualize
BU of 3a3j by Molmil
Crystal structures of penicillin binding protein 5 from Haemophilus influenzae
分子名称: PBP5, SULFATE ION
著者Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H.
登録日2009-06-12
公開日2009-12-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
3A3D
DownloadVisualize
BU of 3a3d by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae
分子名称: GLYCEROL, Penicillin-binding protein 4
著者Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H.
登録日2009-06-12
公開日2009-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
6LF1
DownloadVisualize
BU of 6lf1 by Molmil
SeviL, a GM1b/asialo-GM1 binding lectin
分子名称: CHLORIDE ION, SeviL
著者Kamata, K, Ozeki, Y, Park, S.-Y, Tame, J.R.H.
登録日2019-11-28
公開日2020-12-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata.
Sci Rep, 10, 2020
6LF2
DownloadVisualize
BU of 6lf2 by Molmil
SeviL bound to asialo-GM1 saccharide
分子名称: SeviL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Kamata, K, Ozeki, Y, Park, S.-Y, Tame, J.R.H.
登録日2019-11-28
公開日2020-12-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata.
Sci Rep, 10, 2020

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon