3N38
| Ribonucleotide Reductase NrdF from Escherichia coli Soaked with Ferrous Ions | 分子名称: | FE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta | 著者 | Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C. | 登録日 | 2010-05-19 | 公開日 | 2010-08-18 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for activation of class Ib ribonucleotide reductase. Science, 329, 2010
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3N3B
| Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI with a Trapped Peroxide | 分子名称: | FLAVIN MONONUCLEOTIDE, HYDROGEN PEROXIDE, MANGANESE (II) ION, ... | 著者 | Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C. | 登録日 | 2010-05-19 | 公開日 | 2010-08-18 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.36 Å) | 主引用文献 | Structural basis for activation of class Ib ribonucleotide reductase. Science, 329, 2010
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3N3A
| Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI | 分子名称: | FLAVIN MONONUCLEOTIDE, MANGANESE (II) ION, Protein nrdI, ... | 著者 | Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C. | 登録日 | 2010-05-19 | 公開日 | 2010-08-18 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Structural basis for activation of class Ib ribonucleotide reductase. Science, 329, 2010
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3N39
| Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with NrdI | 分子名称: | FLAVIN MONONUCLEOTIDE, MANGANESE (II) ION, Protein nrdI, ... | 著者 | Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C. | 登録日 | 2010-05-19 | 公開日 | 2010-08-18 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structural basis for activation of class Ib ribonucleotide reductase. Science, 329, 2010
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2HSL
| NMR structure of 13mer duplex DNA containing an abasic site, averaged structure (alpha anomer) | 分子名称: | 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' | 著者 | Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J. | 登録日 | 2006-07-22 | 公開日 | 2007-05-29 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry, 46, 2007
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2HSS
| 13mer duplex DNA containg an abasic site with beta anomer, averaged structure | 分子名称: | 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' | 著者 | Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J. | 登録日 | 2006-07-22 | 公開日 | 2007-05-29 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry, 46, 2007
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2HOU
| Structure ensembles of duplex DNA containing a 4'-oxidized abasic site. | 分子名称: | 5'-D(*CP*CP*AP*AP*AP*GP*(X4A)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' | 著者 | Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J. | 登録日 | 2006-07-16 | 公開日 | 2007-05-29 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry, 46, 2007
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2HSK
| NMR Structure of 13mer Duplex DNA containing an abasic site (Y) in 5'-CCAAAGYACCGGG-3' (10 structures, alpha anomer) | 分子名称: | 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' | 著者 | Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J. | 登録日 | 2006-07-21 | 公開日 | 2007-05-29 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry, 46, 2007
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2HPX
| 13mer Duplex DNA containing a 4'-oxidized abasic site, averaged structure | 分子名称: | 5'-D(*CP*CP*AP*AP*AP*GP*(X4A)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' | 著者 | Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J. | 登録日 | 2006-07-17 | 公開日 | 2007-05-29 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry, 46, 2007
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2HSR
| 13mer duplex DNA containing an abasic site with beta anomer | 分子名称: | 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' | 著者 | Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J. | 登録日 | 2006-07-22 | 公開日 | 2007-05-29 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry, 46, 2007
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1L1L
| CRYSTAL STRUCTURE OF B-12 DEPENDENT (CLASS II) RIBONUCLEOTIDE REDUCTASE | 分子名称: | RIBONUCLEOSIDE TRIPHOSPHATE REDUCTASE | 著者 | Sintchak, M.D, Arjara, G, Kellogg, B.A, Stubbe, J, Drennan, C.L. | 登録日 | 2002-02-18 | 公開日 | 2002-04-10 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer. Nat.Struct.Biol., 9, 2002
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1GJ2
| CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION | 分子名称: | 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ... | 著者 | Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J. | 登録日 | 2000-11-01 | 公開日 | 2001-06-06 | 最終更新日 | 2024-07-10 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage. Biochemistry, 40, 2001
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1G5L
| CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION | 分子名称: | 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ... | 著者 | Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J. | 登録日 | 2000-11-01 | 公開日 | 2001-06-06 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage. Biochemistry, 40, 2001
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1G5K
| NMR Structrure of d(CCAAAGXACTGGG), X is a 3'-phosphoglycolate, 5'-phosphate gapped lesion, 10 structures | 分子名称: | 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ... | 著者 | Junker, H.-D, Hoehn, S.T, Bunt, R.C, Marathius, V, Chen, J, Turner, C.J, Stubbe, J. | 登録日 | 2002-10-14 | 公開日 | 2003-01-07 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Synthesis, Characterization and Solution Structure of Tethered Oligonucleotides Containing an Internal 3'-Phosphoglycolate, 5'-Phosphate Gapped Lesion Nucleic Acids Res., 30, 2002
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1GJ1
| NMR structure of d(CCAAAGXACTGGG), X is a 3'phosphoglycolate, 5'phosphate gapped lesion | 分子名称: | 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ... | 著者 | Junker, H.-D, Hoehn, S.T, Bunt, R.C, Marathius, V, Chen, J, Turner, C.J, Stubbe, J. | 登録日 | 2002-10-14 | 公開日 | 2003-01-07 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Synthesis, Characterization and Solution Structure of Tethered Oligonucleotides Containing an Internal 3'-Phosphoglycolate, 5'-Phosphate Gapped Lesion Nucleic Acids Res., 30, 2002
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2X0X
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2XAZ
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2XAK
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2XAV
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2XAX
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2XOF
| Ribonucleotide reductase Y122NO2Y modified R2 subunit of E. coli | 分子名称: | MU-OXO-DIIRON, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA | 著者 | Yokoyama, K, Uhlin, U, Stubbe, J. | 登録日 | 2010-08-15 | 公開日 | 2010-08-25 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | A Hot Oxidant, 3-No(2)Y(122) Radical, Unmasks Conformational Gating in Ribonucleotide Reductase. J.Am.Chem.Soc., 132, 2010
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2XO5
| RIBONUCLEOTIDE REDUCTASE Y731NH2Y MODIFIED R1 SUBUNIT OF E. COLI | 分子名称: | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA | 著者 | Minnihan, E.C, Seyedsayamdost, M.R, Uhlin, U, Stubbe, J. | 登録日 | 2010-08-09 | 公開日 | 2010-08-18 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Kinetics of Radical Intermediate Formation and Deoxynucleotide Production in 3-Aminotyrosine- Substituted Escherichia Coli Ribonucleotide Reductases. J.Am.Chem.Soc., 133, 2011
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2XO4
| RIBONUCLEOTIDE REDUCTASE Y730NH2Y MODIFIED R1 SUBUNIT OF E. COLI | 分子名称: | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA | 著者 | Minnihan, E.C, Seyedsayamdost, M.R, Uhlin, U, Stubbe, J. | 登録日 | 2010-08-09 | 公開日 | 2010-08-18 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Kinetics of Radical Intermediate Formation and Deoxynucleotide Production in 3-Aminotyrosine- Substituted Escherichia Coli Ribonucleotide Reductases. J.Am.Chem.Soc., 133, 2011
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2XAP
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2XAW
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