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PDB: 2801 件

8CIE
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BU of 8cie by Molmil
Crystal structure of the human CDKL5 kinase domain with compound YL-354
分子名称: 4-[[3,5-bis(fluoranyl)phenyl]carbonylamino]-~{N}-piperidin-4-yl-1~{H}-pyrazole-3-carboxamide, Cyclin-dependent kinase-like 5, SULFATE ION
著者Richardson, W, Chen, X, Newman, J.A, Bakshi, S, Lakshminarayana, B, Brooke, L, Bullock, A.N.
登録日2023-02-09
公開日2023-06-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of a Potent and Selective CDKL5/GSK3 Chemical Probe That Is Neuroprotective.
Acs Chem Neurosci, 14, 2023
5CBZ
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AncMR DNA Binding Domain - (+)GRE Complex
分子名称: AncMR DNA Binding Domain, DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3'), ...
著者Hudson, W.H, Ortlund, E.A.
登録日2015-07-01
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space.
Proc.Natl.Acad.Sci.USA, 113, 2016
5XZJ
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BU of 5xzj by Molmil
Crystal structure of the Zn-directed tetramer of the engineered cyt cb562 variant, C96T/AB5
分子名称: CHLORIDE ION, HEME C, Soluble cytochrome b562, ...
著者Song, W.J, Tezcan, F.A.
登録日2017-07-12
公開日2017-12-20
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Importance of Scaffold Flexibility/Rigidity in the Design and Directed Evolution of Artificial Metallo-beta-lactamases.
J. Am. Chem. Soc., 139, 2017
5CBY
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BU of 5cby by Molmil
AncGR2 DNA Binding Domain - (+)GRE Complex
分子名称: AncGR2 DNA Binding Domain, DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3'), ...
著者Hudson, W.H, Ortlund, E.A.
登録日2015-07-01
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space.
Proc.Natl.Acad.Sci.USA, 113, 2016
5CC0
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BU of 5cc0 by Molmil
AncSR2 - TSLP nGRE complex
分子名称: AncSR2 DNA Binding Domain, DNA (5'-D(*AP*GP*CP*TP*CP*TP*CP*CP*CP*GP*GP*AP*GP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*CP*TP*CP*CP*GP*GP*GP*AP*GP*AP*GP*CP*T)-3'), ...
著者Hudson, W.H, Ortlund, E.A.
登録日2015-07-01
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.405 Å)
主引用文献Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space.
Proc.Natl.Acad.Sci.USA, 113, 2016
5XZI
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BU of 5xzi by Molmil
Crystal structure of the Zn-directed tetramer of the engineered cyt cb562 variant, AB5
分子名称: CHLORIDE ION, HEME C, Soluble cytochrome b562, ...
著者Song, W.J, Tezcan, F.A.
登録日2017-07-12
公開日2017-12-20
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Importance of Scaffold Flexibility/Rigidity in the Design and Directed Evolution of Artificial Metallo-beta-lactamases.
J. Am. Chem. Soc., 139, 2017
5E6A
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BU of 5e6a by Molmil
Glucocorticoid receptor DNA binding domain - PLAU NF-kB response element complex
分子名称: DNA (5'-D(*AP*TP*CP*AP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*TP*GP*AP*T)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
3AL1
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BU of 3al1 by Molmil
DESIGNED PEPTIDE ALPHA-1, RACEMIC P1BAR FORM
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ETHANOLAMINE, PROTEIN (D, ...
著者Patterson, W.R, Anderson, D.H, Degrado, W.F, Cascio, D, Eisenberg, D.
登録日1998-10-26
公開日1998-11-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (0.75 Å)
主引用文献Centrosymmetric bilayers in the 0.75 A resolution structure of a designed alpha-helical peptide, D,L-Alpha-1.
Protein Sci., 8, 1999
8JZD
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BU of 8jzd by Molmil
Crystal structure of Escherichia coli NarJ in complex with the signal peptide of E. coli NarG
分子名称: Nitrate reductase molybdenum cofactor assembly chaperone NarJ, Respiratory nitrate reductase 1 alpha chain
著者Song, W.S, Kim, J.H, Namgung, B, Cho, H.Y, Oh, H.B, Yoon, S.I.
登録日2023-07-05
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Complementary hydrophobic interaction of the redox enzyme maturation protein NarJ with the signal peptide of the respiratory nitrate reductase NarG.
Int.J.Biol.Macromol., 262, 2024
8JZC
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BU of 8jzc by Molmil
Crystal structure of Geobacillus stearothermophilus NarJ
分子名称: Nitrate reductase molybdenum cofactor assembly chaperone
著者Song, W.S, Kim, J.H, Namgung, B, Cho, H.Y, Oh, H.B, Yoon, S.I.
登録日2023-07-05
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Complementary hydrophobic interaction of the redox enzyme maturation protein NarJ with the signal peptide of the respiratory nitrate reductase NarG.
Int.J.Biol.Macromol., 262, 2024
5H5V
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BU of 5h5v by Molmil
Crystal structure of the flagellar cap protein FliD D1-D2-D3 domains from Escherichia coli
分子名称: Flagellar hook-associated protein 2
著者Song, W.S, Cho, S.Y, Hong, H.J, Yoon, S.I.
登録日2016-11-09
公開日2017-02-22
最終更新日2017-04-05
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Self-Oligomerizing Structure of the Flagellar Cap Protein FliD and Its Implication in Filament Assembly.
J. Mol. Biol., 429, 2017
5GY2
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BU of 5gy2 by Molmil
Crystal structure of a complex between Bacillus subtilis flagellin and zebrafish Toll-like receptor 5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Flagellin, ...
著者Song, W.S, Yoon, S.I.
登録日2016-09-21
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A conserved TLR5 binding and activation hot spot on flagellin
Sci Rep, 7, 2017
5H5W
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BU of 5h5w by Molmil
Crystal structure of the flagellar cap protein FliD D2-D3 domains from Escherichia coli
分子名称: Flagellar hook-associated protein 2
著者Song, W.S, Cho, S.Y, Hong, H.J, Yoon, S.I.
登録日2016-11-09
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Self-Oligomerizing Structure of the Flagellar Cap Protein FliD and Its Implication in Filament Assembly.
J. Mol. Biol., 429, 2017
5HZ0
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BU of 5hz0 by Molmil
Plant peptide hormone receptor RGFR1 in complex with RGF2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASP-PTR-TRP-LYS-PRO-ARG-HIS-HIS-PRO-HYP-ARG-ASN-ASN, ...
著者Song, W, Han, Z, Chai, J.
登録日2016-02-02
公開日2017-04-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Plant Receptor
To Be Published
5H5T
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BU of 5h5t by Molmil
Crystal structure of the flagellar cap protein FliD D2-D3 domains from Salmonella Typhimurium
分子名称: Flagellar hook-associated protein 2
著者Song, W.S, Cho, S.Y, Hong, H.J, Yoon, S.I.
登録日2016-11-09
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Self-Oligomerizing Structure of the Flagellar Cap Protein FliD and Its Implication in Filament Assembly.
J. Mol. Biol., 429, 2017
7ZNM
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BU of 7znm by Molmil
Artificial Unspecific Peroxygenase expressed in Pichia pastoris at 2.01 Angstrom resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Artificial Unspecific Peroxygenase, ...
著者Robinson, W.X.Q, Mielke, T, Grogan, G.
登録日2022-04-21
公開日2023-03-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Comparing the Catalytic and Structural Characteristics of a 'Short' Unspecific Peroxygenase (UPO) Expressed in Pichia pastoris and Escherichia coli.
Chembiochem, 24, 2023
7ZNV
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BU of 7znv by Molmil
Artificial Unspecific Peroxygenase expressed in Pichia pastoris at 1.21 Angstrom resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
著者Robinson, W.X.Q, Mielke, T, Grogan, G.
登録日2022-04-22
公開日2023-03-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Comparing the Catalytic and Structural Characteristics of a 'Short' Unspecific Peroxygenase (UPO) Expressed in Pichia pastoris and Escherichia coli.
Chembiochem, 24, 2023
7ZNW
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BU of 7znw by Molmil
Artificial Unspecific Peroxygenase expressed in Escherichia coli at 2.09 Angstrom resolution
分子名称: MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, artificial unspecific peoxygenase
著者Robinson, W.X.Q, Mielke, T, Grogan, G.
登録日2022-04-22
公開日2023-03-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Comparing the Catalytic and Structural Characteristics of a 'Short' Unspecific Peroxygenase (UPO) Expressed in Pichia pastoris and Escherichia coli.
Chembiochem, 24, 2023
6AI5
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BU of 6ai5 by Molmil
Disulfide-free, Zn-directed tetramer of the engineered cyt cb562 variant, C96T/A104AB3
分子名称: CHLORIDE ION, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Song, W.J, Tezcan, F.A.
登録日2018-08-21
公開日2019-09-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Disulfide-free, Zn-directed tetramer of the engineered cyt cb562 variant, C96T/A104AB3
To Be Published
1RKT
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BU of 1rkt by Molmil
Crystal structure of yfiR, a putative transcriptional regulator from Bacillus subtilis
分子名称: UNKNOWN ATOM OR ION, protein yfiR
著者Anderson, W.F, Rajan, S.S, Yang, X, Midwest Center for Structural Genomics (MCSG)
登録日2003-11-23
公開日2004-04-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of YfiR, an unusual TetR/CamR-type putative transcriptional regulator from Bacillus subtilis.
Proteins, 65, 2006
1K4J
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BU of 1k4j by Molmil
Crystal Structure of the Acyl-homoserinelactone Synthase EsaI Complexed with Rhenate
分子名称: PERRHENATE, acyl-homoserinelactone synthase EsaI
著者Watson, W.T, Minogue, T.D, Val, D.L, Beck von Bodman, S, Churchill, M.E.A.
登録日2001-10-08
公開日2002-04-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing.
Mol.Cell, 9, 2002
2QXL
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BU of 2qxl by Molmil
Crystal Structure Analysis of Sse1, a yeast Hsp110
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein homolog SSE1, MAGNESIUM ION, ...
著者Hendrickson, W.A, Liu, Q.
登録日2007-08-12
公開日2007-10-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Insights into hsp70 chaperone activity from a crystal structure of the yeast hsp110 Sse1.
Cell(Cambridge,Mass.), 131, 2007
5E6B
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BU of 5e6b by Molmil
Glucocorticoid receptor DNA binding domain - RELB NF-kB response element complex
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*GP*AP*AP*TP*TP*CP*CP*GP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*AP*AP*TP*TP*CP*CP*CP*CP*GP*G)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
5E6C
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BU of 5e6c by Molmil
Glucocorticoid receptor DNA binding domain - CCL2 NF-kB response element complex
分子名称: DNA (5'-D(*AP*GP*TP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*AP*CP*T)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
5E69
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BU of 5e69 by Molmil
Glucocorticoid receptor DNA binding domain - IL8 NF-kB response element complex
分子名称: DNA (5'-D(*AP*TP*CP*GP*TP*GP*GP*AP*AP*TP*TP*TP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*AP*AP*AP*TP*TP*CP*CP*AP*CP*GP*AP*T)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018

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