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PDB: 632 results

1NON
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BU of 1non by Molmil
PyrR, the regulator of the pyrimidine biosynthetic operon in Bacillus caldolyticus
Descriptor: PyrR bifunctional protein
Authors:Switzer, R.L, Chander, P, Smith, J.L, Halbig, K.M, Miller, J.K, Bonner, H.K, Grabner, G.K.
Deposit date:2003-01-16
Release date:2004-05-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides
J.Bacteriol., 187, 2005
1O57
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BU of 1o57 by Molmil
CRYSTAL STRUCTURE OF THE PURINE OPERON REPRESSOR OF BACILLUS SUBTILIS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, ...
Authors:Sinha, S.C, Krahn, J, Shin, B.S, Tomchick, D.R, Zalkin, H, Smith, J.L.
Deposit date:2003-04-20
Release date:2003-08-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Purine Repressor of Bacillus Subtilis: A Novel Combination of Domains Adapted for Transcription Regulation
J.Bacteriol., 185, 2003
5VE4
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BU of 5ve4 by Molmil
Crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans
Descriptor: BpPRF, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
Deposit date:2017-04-03
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5VE5
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BU of 5ve5 by Molmil
Crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans in complex with glutathione
Descriptor: BpPRF, CHLORIDE ION, FE (III) ION, ...
Authors:Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
Deposit date:2017-04-03
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5W3V
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BU of 5w3v by Molmil
Crystal Structure of macaque APOBEC3H in complex with RNA
Descriptor: Apobec3H, RNA (5'-R(P*AP*AP*CP*CP*CP*CP*GP*GP*GP*C)-3'), RNA (5'-R(P*AP*AP*CP*CP*CP*GP*GP*GP*GP*A)-3'), ...
Authors:Bohn, J.A, Thummar, K, York, A, Raymond, A, Brown, W.C, Bieniasz, P.D, Hatziioannou, T, Smith, J.L.
Deposit date:2017-06-08
Release date:2017-10-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.243 Å)
Cite:APOBEC3H structure reveals an unusual mechanism of interaction with duplex RNA.
Nat Commun, 8, 2017
5VE3
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BU of 5ve3 by Molmil
Crystal structure of wild-type persulfide dioxygenase-rhodanese fusion protein from Burkholderia phytofirmans
Descriptor: BpPRF, FE (III) ION
Authors:Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
Deposit date:2017-04-03
Release date:2017-07-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.793 Å)
Cite:Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
1JVN
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BU of 1jvn by Molmil
CRYSTAL STRUCTURE OF IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE: A TUNNEL THROUGH A (BETA/ALPHA)8 BARREL JOINS TWO ACTIVE SITES
Descriptor: BIFUNCTIONAL HISTIDINE BIOSYNTHESIS PROTEIN HISHF, NICKEL (II) ION, PYROPHOSPHATE 2-, ...
Authors:Chaudhuri, B.N, Smith, J.L, Davisson, V.J, Myers, R.S, Lange, S.C, Chittur, S.V.
Deposit date:2001-08-30
Release date:2001-10-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of imidazole glycerol phosphate synthase: a tunnel through a (beta/alpha)8 barrel joins two active sites.
Structure, 9, 2001
6A91
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BU of 6a91 by Molmil
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with saxitoxin and Dc1a
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
6A95
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BU of 6a95 by Molmil
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with tetrodotoxin and Dc1a
Descriptor: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
4H5Q
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BU of 4h5q by Molmil
Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Hexamer Bound to Single-stranded DNA
Descriptor: 30-mer poly(T) DNA, Nucleocapsid protein
Authors:Raymond, D.D, Smith, J.L.
Deposit date:2012-09-18
Release date:2012-11-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Phleboviruses encapsidate their genomes by sequestering RNA bases.
Proc.Natl.Acad.Sci.USA, 109, 2012
5WGT
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BU of 5wgt by Molmil
Crystal Structure of MalA' H253A, premalbrancheamide complex
Descriptor: (5aS,12aS,13aS)-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, CADMIUM ION, CHLORIDE ION, ...
Authors:Fraley, A.E, Smith, J.L.
Deposit date:2017-07-14
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids.
J. Am. Chem. Soc., 139, 2017
1P4A
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BU of 1p4a by Molmil
Crystal Structure of the PurR complexed with cPRPP
Descriptor: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, Pur operon repressor
Authors:Bera, A.K, Zhu, J, Zalkin, H, Smith, J.L.
Deposit date:2003-04-22
Release date:2003-12-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Functional dissection of the Bacillus subtilis pur operator site.
J.Bacteriol., 185, 2003
5WM2
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BU of 5wm2 by Molmil
Crystal Structure of CahJ in Complex with Salicylic Acid and AMP
Descriptor: 2-HYDROXYBENZOIC ACID, ACETATE ION, ADENOSINE MONOPHOSPHATE, ...
Authors:Sikkema, A.P, Smith, J.L.
Deposit date:2017-07-28
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.548 Å)
Cite:A Defined and Flexible Pocket Explains Aryl Substrate Promiscuity of the Cahuitamycin Starter Unit-Activating Enzyme CahJ.
Chembiochem, 19, 2018
4H5M
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BU of 4h5m by Molmil
Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Hexamer
Descriptor: Nucleocapsid protein, SULFATE ION
Authors:Raymond, D.D, Smith, J.L.
Deposit date:2012-09-18
Release date:2012-11-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Phleboviruses encapsidate their genomes by sequestering RNA bases.
Proc.Natl.Acad.Sci.USA, 109, 2012
9CEL
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BU of 9cel by Molmil
Juvenimicin Thioesterase
Descriptor: Type I PKS module 7
Authors:Akey, D.L, Smith, J.S, Choudhary, V.
Deposit date:2024-06-26
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Substrate Trapping in Polyketide Synthase Thioesterase Domains: Structural Basis for Macrolactone Formation
Acs Catalysis, 14, 2024
9CGL
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BU of 9cgl by Molmil
Pikromycin Thioesterase Doubly Protected DAP
Descriptor: 2-{[(1R)-1-(6-nitro-2H-1,3-benzodioxol-5-yl)ethyl]sulfanyl}ethyl formate, Narbonolide/10-deoxymethynolide synthase PikA4, module 6
Authors:McCullough, T.M, Smith, J.L.
Deposit date:2024-06-29
Release date:2024-09-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Substrate Trapping in Polyketide Synthase Thioesterase Domains: Structural Basis for Macrolactone Formation
Acs Catalysis, 14, 2024
9CBD
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BU of 9cbd by Molmil
Pikromycin Thioesterase Domain
Descriptor: Narbonolide/10-deoxymethynolide synthase PikA4, module 6
Authors:McCullough, T.M, Smith, J.L.
Deposit date:2024-06-19
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate Trapping in Polyketide Synthase Thioesterase Domains: Structural Basis for Macrolactone Formation
Acs Catalysis, 14, 2024
9CFJ
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BU of 9cfj by Molmil
Fluvirucin Thioesterase Domain (FluC TE)
Descriptor: FluC, GLYCEROL, PENTAETHYLENE GLYCOL
Authors:Choudhary, V, Smith, J.L.
Deposit date:2024-06-27
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Substrate Trapping in Polyketide Synthase Thioesterase Domains: Structural Basis for Macrolactone Formation
Acs Catalysis, 14, 2024
1CI3
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BU of 1ci3 by Molmil
CYTOCHROME F FROM THE B6F COMPLEX OF PHORMIDIUM LAMINOSUM
Descriptor: HEME C, PROTEIN (CYTOCHROME F), ZINC ION
Authors:Carrell, C.J, Schlarb, B.G, Howe, C.J, Bendall, D.S, Cramer, W.A, Smith, J.L.
Deposit date:1999-04-07
Release date:1999-08-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the soluble domain of cytochrome f from the cyanobacterium Phormidium laminosum.
Biochemistry, 38, 1999
5THY
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BU of 5thy by Molmil
Crystal structure of SeMet-Substituted CurJ carbon methyltransferase
Descriptor: CurJ, OXIDIZED GLUTATHIONE DISULFIDE, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Skiba, M.A, Smith, J.L.
Deposit date:2016-09-30
Release date:2016-10-19
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.087 Å)
Cite:Domain Organization and Active Site Architecture of a Polyketide Synthase C-methyltransferase.
ACS Chem. Biol., 11, 2016
4V1U
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BU of 4v1u by Molmil
Heterocyclase in complex with substrate and Cofactor
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, LYND, ...
Authors:Koehnke, J, Naismith, J.H.
Deposit date:2014-10-02
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing.
Nat.Chem.Biol., 11, 2015
4V1T
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BU of 4v1t by Molmil
Heterocyclase in complex with substrate and Cofactor
Descriptor: ADENOSINE-5'-DIPHOSPHATE, LYND, MAGNESIUM ION, ...
Authors:Koehnke, J, Naismith, J.H.
Deposit date:2014-10-02
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing
Nat.Chem.Biol., 11, 2015
4V1V
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BU of 4v1v by Molmil
Heterocyclase in complex with substrate and Cofactor
Descriptor: LYND, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Koehnke, J, Naismith, J.H.
Deposit date:2014-10-02
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing.
Nat.Chem.Biol., 11, 2015
1ECJ
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BU of 1ecj by Molmil
ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 AMP PER TETRAMER
Descriptor: ADENOSINE MONOPHOSPHATE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE
Authors:Muchmore, C.R, Krahn, J.M, Smith, J.L.
Deposit date:1997-07-16
Release date:1998-04-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of glutamine phosphoribosylpyrophosphate amidotransferase from Escherichia coli.
Protein Sci., 7, 1998
4TPL
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BU of 4tpl by Molmil
West Nile Virus Non-structural protein 1 (NS1) Form 1 crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, OXTOXYNOL-10, ...
Authors:Akey, D.L, Smith, J.L.
Deposit date:2014-06-08
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Use of massively multiple merged data for low-resolution S-SAD phasing and refinement of flavivirus NS1.
Acta Crystallogr.,Sect.D, 70, 2014

226707

数据于2024-10-30公开中

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