Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 67 results

6ET6
DownloadVisualize
BU of 6et6 by Molmil
Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
Descriptor: GLYCEROL, Lysozyme, SULFATE ION
Authors:Boyko, K.M, Nikolaeva, A.Y, Sykilinda, N.N, Shneider, M.M, Miroshnikov, K.A, Popov, V.O.
Deposit date:2017-10-25
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of anAcinetobacterBroad-Range Prophage Endolysin Reveals a C-Terminal alpha-Helix with the Proposed Role in Activity against Live Bacterial Cells.
Viruses, 10, 2018
6EU4
DownloadVisualize
BU of 6eu4 by Molmil
Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
Descriptor: Tail spike protein, ZINC ION
Authors:Taylor, N.M.I, Shneider, M.M, Leiman, P.G.
Deposit date:2017-10-27
Release date:2018-11-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.794 Å)
Cite:Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
To Be Published
6RJU
DownloadVisualize
BU of 6rju by Molmil
C-terminal domain of TssA protein from T6SS of Escherichia coli.
Descriptor: Putative type VI secretion protein
Authors:Nazarov, S, Shneider, M, Basler, M, Leiman, P.
Deposit date:2019-04-29
Release date:2020-06-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of TssA protein from Type VI secretion system of E. coli.
To Be Published
5CES
DownloadVisualize
BU of 5ces by Molmil
C-terminal domain of the R-type pyocin baseplate protein PA0618
Descriptor: PA0618
Authors:Plattner, M, Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2015-07-07
Release date:2016-07-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
1YUE
DownloadVisualize
BU of 1yue by Molmil
Bacteriophage T4 capsid vertex protein gp24
Descriptor: Head vertex protein Gp24
Authors:Fokine, A, Leiman, P.G, Shneider, M.M, Ahvazi, B, Boeshans, K.M, Steven, A.C, Black, L.W, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2005-02-14
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4Y9V
DownloadVisualize
BU of 4y9v by Molmil
Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-alpha-D-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-mannopyranuronic acid, CHLORIDE ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2015-02-17
Release date:2017-02-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Structure of Acinetobacter baumannii bacteriophage AP22 polysaccharide degrading lyase in complex with A. baumannii capsular saccharide at 0.9 A resolution
TO BE PUBLISHED
4GBF
DownloadVisualize
BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
Authors:Sycheva, L.V, Shneider, M.M, Leiman, P.G.
Deposit date:2012-07-27
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
5IW9
DownloadVisualize
BU of 5iw9 by Molmil
Structure of bacteriophage T4 gp25, sheath polymerization initiator
Descriptor: Baseplate wedge protein gp25
Authors:Leiman, P.G, Browning, C, Shneider, M.M.
Deposit date:2016-03-22
Release date:2016-05-11
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
6P20
DownloadVisualize
BU of 6p20 by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
Descriptor: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5,PHIKZ164, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-20
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
To Be Published
6P1Z
DownloadVisualize
BU of 6p1z by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
Descriptor: 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5, MAGNESIUM ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-20
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
To Be Published
6P22
DownloadVisualize
BU of 6p22 by Molmil
Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
Descriptor: 9-OCTADECENOIC ACID, CHIMERA OF CENTRAL SPIKE PROTEINS GP5 FROM PHAGE T4 AND PVC8 FROM PVC, MAGNESIUM ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-20
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.291 Å)
Cite:Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
To Be Published
6P2A
DownloadVisualize
BU of 6p2a by Molmil
Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
Descriptor: 9-OCTADECENOIC ACID, CHIMERA OF BACTERIOPHAGE OBP GP146 AND A T4 GP5, FE (II) ION, ...
Authors:Buth, S.A, Shneider, M.M, Leiman, P.G.
Deposit date:2019-05-21
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
To Be Published
3BKV
DownloadVisualize
BU of 3bkv by Molmil
X-ray structure of the bacteriophage phiKZ lytic transglycosylase, gp144, in complex with chitotetraose, (NAG)4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, SULFATE ION, ...
Authors:Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2007-12-07
Release date:2008-01-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
3BKH
DownloadVisualize
BU of 3bkh by Molmil
Crystal structure of the bacteriophage phiKZ lytic transglycosylase, gp144
Descriptor: NICKEL (II) ION, SULFATE ION, lytic transglycosylase
Authors:Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2007-12-06
Release date:2008-01-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
8OQ0
DownloadVisualize
BU of 8oq0 by Molmil
Crystal structure of tailspike depolymerase (APK09_gp48) from Acinetobacter phage APK09
Descriptor: DI(HYDROXYETHYL)ETHER, Tailspike protein
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Popova, A.V, Miroshnikov, K.A, Popov, V.O.
Deposit date:2023-04-10
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii .
Int J Mol Sci, 24, 2023
8OPZ
DownloadVisualize
BU of 8opz by Molmil
Crystal structure of a tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16
Descriptor: GLYCEROL, Tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O.
Deposit date:2023-04-10
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii .
Int J Mol Sci, 24, 2023
8OQ1
DownloadVisualize
BU of 8oq1 by Molmil
Crystal structure of tailspike depolymerase (APK14_gp49) from Acinetobacter phage vB_AbaP_APK14
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O.
Deposit date:2023-04-10
Release date:2023-06-07
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii.
Int J Mol Sci, 24, 2023
8QJA
DownloadVisualize
BU of 8qja by Molmil
T6SS-linked Rhs repeat protein - Advenella mimigardefordensis VgrG-Rhs core
Descriptor: Putative type VI secretion system YD repeat-containing Rhs element Vgr protein
Authors:Kielkopf, C.S, Shneider, M.M, Leiman, P.G, Taylor, N.M.I.
Deposit date:2023-09-13
Release date:2024-09-25
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:T6SS-associated Rhs proteins form toxin containers: Structural and functional insights into bacterial weaponry and self-protection
To Be Published
8QJB
DownloadVisualize
BU of 8qjb by Molmil
T6SS-linked Rhs repeat protein - Salmonella bongori Rhs-core domain extended N-terminus
Descriptor: T6SS-associated Rhs core domain
Authors:Kielkopf, C.S, Shneider, M.M, Leiman, P.G, Taylor, N.M.I.
Deposit date:2023-09-13
Release date:2024-09-25
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:T6SS-associated Rhs proteins form toxin containers: Structural and functional insights into bacterial weaponry and self-protection
To Be Published
8QJC
DownloadVisualize
BU of 8qjc by Molmil
T6SS-linked Rhs repeat protein - Salmonella bongori Rhs-core domain with toxin domain
Descriptor: T6SS-associated Rhs core and toxin domain
Authors:Kielkopf, C.S, Shneider, M.M, Leiman, P.G, Taylor, N.M.I.
Deposit date:2023-09-13
Release date:2024-09-25
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:T6SS-associated Rhs proteins form toxin containers: Structural and functional insights into bacterial weaponry and self-protection
To Be Published
3PQI
DownloadVisualize
BU of 3pqi by Molmil
Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138
Descriptor: FE (III) ION, POTASSIUM ION, gene product 138
Authors:Browning, C, Shneider, M, Leiman, P.G.
Deposit date:2010-11-26
Release date:2012-02-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
3QR7
DownloadVisualize
BU of 3qr7 by Molmil
Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV
Descriptor: Baseplate assembly protein V, CALCIUM ION, CHLORIDE ION, ...
Authors:Browning, C, Shneider, M, Leiman, P.G.
Deposit date:2011-02-17
Release date:2012-02-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
3QR8
DownloadVisualize
BU of 3qr8 by Molmil
Crystal structure of the bacteriophage P2 membrane-piercing protein gpV
Descriptor: Baseplate assembly protein V, CHLORIDE ION, GLYCEROL
Authors:Browning, C, Shneider, M, Leiman, P.G.
Deposit date:2011-02-17
Release date:2012-02-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
3PQH
DownloadVisualize
BU of 3pqh by Molmil
Crystal structure of the C-terminal fragment of the bacteriophage phi92 membrane-piercing protein gp138
Descriptor: FE (III) ION, SODIUM ION, gene product 138
Authors:Browning, C, Shneider, M, Leiman, P.G.
Deposit date:2010-11-26
Release date:2012-02-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.295 Å)
Cite:Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
1N7Z
DownloadVisualize
BU of 1n7z by Molmil
Structure and location of gene product 8 in the bacteriophage T4 baseplate
Descriptor: CHLORIDE ION, baseplate structural protein gp8
Authors:Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2002-11-18
Release date:2003-06-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003

 

123>

227111

数据于2024-11-06公开中

PDB statisticsPDBj update infoContact PDBjnumon