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PDB: 63 件
6CL5
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BU of 6cl5 by Molmil
Structure of P. aeruginosa R1 pyocin fiber PALES_06171 comprising C-terminal residues 323-701
分子名称: FE (III) ION, MAGNESIUM ION, SODIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2018-03-01
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.324 Å)
主引用文献Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
Viruses, 10, 2018
4Y9V
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BU of 4y9v by Molmil
Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-alpha-D-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-mannopyranuronic acid, CHLORIDE ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-02-17
公開日2017-02-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Structure of Acinetobacter baumannii bacteriophage AP22 polysaccharide degrading lyase in complex with A. baumannii capsular saccharide at 0.9 A resolution
TO BE PUBLISHED
1YUE
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BU of 1yue by Molmil
Bacteriophage T4 capsid vertex protein gp24
分子名称: Head vertex protein Gp24
著者Fokine, A, Leiman, P.G, Shneider, M.M, Ahvazi, B, Boeshans, K.M, Steven, A.C, Black, L.W, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2005-02-14
公開日2005-04-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5CES
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BU of 5ces by Molmil
C-terminal domain of the R-type pyocin baseplate protein PA0618
分子名称: PA0618
著者Plattner, M, Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-07-07
公開日2016-07-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6C72
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BU of 6c72 by Molmil
Crystal structure of a tailspike protein gp49 from Acinetobacter baumannii bacteriophage Fri1, a capsular polysaccharide depolymerase
分子名称: Particle-associated glycoside hydrolase, ZINC ION
著者Buth, S.A, Garcon, A, Popova, A.V, Shneider, M.M, Leiman, P.G.
登録日2018-01-19
公開日2019-01-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Exopolysaccharide degrading enzymes - specificity determinants of Acinetobacter baumannii phages
To Be Published
4GBF
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BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
分子名称: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2012-07-27
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
6P20
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BU of 6p20 by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
分子名称: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5,PHIKZ164, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.749 Å)
主引用文献Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164
To Be Published
6P1Z
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BU of 6p1z by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
分子名称: 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5, MAGNESIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
To Be Published
6P2A
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BU of 6p2a by Molmil
Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
分子名称: 9-OCTADECENOIC ACID, CHIMERA OF BACTERIOPHAGE OBP GP146 AND A T4 GP5, FE (II) ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-21
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
To Be Published
6PYT
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BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
分子名称: Pyocin sheath PA0622, Pyocin tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-07-30
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6P22
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BU of 6p22 by Molmil
Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
分子名称: 9-OCTADECENOIC ACID, CHIMERA OF CENTRAL SPIKE PROTEINS GP5 FROM PHAGE T4 AND PVC8 FROM PVC, MAGNESIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.291 Å)
主引用文献Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
To Be Published
3BKV
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BU of 3bkv by Molmil
X-ray structure of the bacteriophage phiKZ lytic transglycosylase, gp144, in complex with chitotetraose, (NAG)4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, SULFATE ION, ...
著者Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2007-12-07
公開日2008-01-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
4S37
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BU of 4s37 by Molmil
Crystal structure of R2 pyocin membrane-piercing spike
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Browning, C.B, Leiman, P.G, Shneider, M.M.
登録日2015-01-26
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of R2 pyocin membrane-piercing spike
To be Published
5IW9
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BU of 5iw9 by Molmil
Structure of bacteriophage T4 gp25, sheath polymerization initiator
分子名称: Baseplate wedge protein gp25
著者Leiman, P.G, Browning, C, Shneider, M.M.
登録日2016-03-22
公開日2016-05-11
最終更新日2016-06-08
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
6RJU
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BU of 6rju by Molmil
C-terminal domain of TssA protein from T6SS of Escherichia coli.
分子名称: Putative type VI secretion protein
著者Nazarov, S, Shneider, M, Basler, M, Leiman, P.
登録日2019-04-29
公開日2020-06-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of TssA protein from Type VI secretion system of E. coli.
To Be Published
3BKH
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BU of 3bkh by Molmil
Crystal structure of the bacteriophage phiKZ lytic transglycosylase, gp144
分子名称: NICKEL (II) ION, SULFATE ION, lytic transglycosylase
著者Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2007-12-06
公開日2008-01-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
8OQ0
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BU of 8oq0 by Molmil
Crystal structure of tailspike depolymerase (APK09_gp48) from Acinetobacter phage APK09
分子名称: DI(HYDROXYETHYL)ETHER, Tailspike protein
著者Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Popova, A.V, Miroshnikov, K.A, Popov, V.O.
登録日2023-04-10
公開日2023-05-31
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii .
Int J Mol Sci, 24, 2023
8OQ1
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BU of 8oq1 by Molmil
Crystal structure of tailspike depolymerase (APK14_gp49) from Acinetobacter phage vB_AbaP_APK14
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O.
登録日2023-04-10
公開日2023-06-07
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii.
Int J Mol Sci, 24, 2023
8OPZ
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BU of 8opz by Molmil
Crystal structure of a tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16
分子名称: GLYCEROL, Tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16
著者Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O.
登録日2023-04-10
公開日2023-05-31
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii .
Int J Mol Sci, 24, 2023
4RU4
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BU of 4ru4 by Molmil
Crystal structure of the tailspike protein gp49 from Pseudomonas phage LKA1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
4RU5
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BU of 4ru5 by Molmil
Crystal Structure of the Pseudomonas phage phi297 tailspike gp61
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Browning, C, Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
1N80
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BU of 1n80 by Molmil
Bacteriophage T4 baseplate structural protein gp8
分子名称: CHLORIDE ION, baseplate structural protein gp8
著者Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2002-11-18
公開日2003-06-10
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003
4S36
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BU of 4s36 by Molmil
Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
分子名称: FE (III) ION, Phage baseplate protein
著者Browning, C.B, Leiman, P.G, Shneider, M.M.
登録日2015-01-26
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
To be Published
4RU3
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BU of 4ru3 by Molmil
Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
分子名称: CALCIUM ION, FE (III) ION, GLYCEROL, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.172 Å)
主引用文献Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
To be Published
1N7Z
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BU of 1n7z by Molmil
Structure and location of gene product 8 in the bacteriophage T4 baseplate
分子名称: CHLORIDE ION, baseplate structural protein gp8
著者Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2002-11-18
公開日2003-06-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003

 

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