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PDB: 838 results

2CWJ
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crystal structure of APE1501, a putative endonuclease from Aeropyrum pernix
Descriptor: putative endonuclease
Authors:Takemoto-hori, C, Suetsugu-hanawa, K, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-21
Release date:2005-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:crystal structure of APE1501, a putative endonuclease from Aeropyrum pernix
To be Published
2CWQ
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Crystal structure of conserved protein TTHA0727 from Thermus thermophilus HB8
Descriptor: hypothetical protein TTHA0727
Authors:Ito, K, Arai, R, Fusatomi, E, Kamo-Uchikubo, T, Kawaguchi, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-23
Release date:2005-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the conserved protein TTHA0727 from Thermus thermophilus HB8 at 1.9 A resolution: A CMD family member distinct from carboxymuconolactone decarboxylase (CMD) and AhpD
Protein Sci., 15, 2006
2CX1
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Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (tartrate complex)
Descriptor: L(+)-TARTARIC ACID, hypothetical protein APE0525
Authors:Mizohata, E, Morita, S, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (tartrate complex)
To be Published
2CWX
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Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
Descriptor: Ribulose bisphosphate carboxylase
Authors:Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
To be Published
2DYY
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Crystal structure of putative translation initiation inhibitor PH0854 from Pyrococcus horikoshii
Descriptor: UPF0076 protein PH0854
Authors:Ihsanawati, Kishishita, S, Murayama, K, Chen, L, Liu, Z.J, Wang, B.C, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-19
Release date:2007-03-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of putative translation initiation inhibitor PH0854 from Pyrococcus horikoshii
To be Published
2EGW
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Crystal structure of rRNA methyltransferase with SAH ligand
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, UPF0088 protein aq_165
Authors:Dong, X, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of rRNA methyltransferase with SAH ligand
To be Published
2EJ8
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Crystal structure of APPL1 PTB domain at 1.8A
Descriptor: DCC-interacting protein 13 alpha
Authors:Tanabe, H, Hosaka, T, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-15
Release date:2008-03-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of APPL1 PTB domain at 1.8A
To be Published
2DX6
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Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8
Descriptor: ACETATE ION, Hypothetical protein TTHA0132, ISOPROPYL ALCOHOL
Authors:Kishishita, S, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-24
Release date:2007-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8
To be Published
2EK1
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Crystal structure of RNA-binding motif of human rna-binding protein 12
Descriptor: RNA-binding protein 12
Authors:Ihsanawati, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-22
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of RNA-binding motif of human rna-binding protein 12
To be Published
2CWN
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Crystal structure of mouse transaldolase
Descriptor: Transaldolase
Authors:Handa, N, Arai, R, Nishino, A, Uchikubo, T, Takemoto, C, Morita, S, Kinoshita, Y, Nagano, Y, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-22
Release date:2005-12-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of mouse transaldolase
To be Published
2CX0
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Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)
Descriptor: SULFATE ION, hypothetical protein APE0525
Authors:Mizohata, E, Morita, S, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)
To be Published
2CX9
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Crystal structure of acyl-CoA dehydrogenase
Descriptor: CHLORIDE ION, acyl-CoA dehydrogenase
Authors:Murayama, K, Kinebuchi, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-28
Release date:2005-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of acyl-CoA dehydrogenase
To be Published
2CYD
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Crystal structure of Lithium bound rotor ring of the V-ATPase from Enterococcus hirae
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, LITHIUM ION, UNDECYL-MALTOSIDE, ...
Authors:Murata, T, Yamato, I, Kakinuma, Y, Shirouzu, M, Walker, J.E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-06
Release date:2006-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Lithium bound rotor ring of the V-ATPase from Enterococcus hirae
To be Published
2CX8
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Crystal structure of methyltransferase with ligand(SAH)
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, methyl transferase
Authors:Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-28
Release date:2005-12-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of methyltransferase with ligand(SAH)
To be Published
2CXK
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Crystal structure of the TIG domain of human calmodulin-binding transcription activator 1 (CAMTA1)
Descriptor: SULFATE ION, calmodulin binding transcription activator 1
Authors:Pioszak, A.A, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-30
Release date:2005-12-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the TIG domain of human calmodulin-binding transcription activator 1 (CAMTA1)
To be Published
2CY4
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Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)
Descriptor: CALCIUM ION, epidermal growth factor receptor pathway substrate 8-like protein 1
Authors:Mizohata, E, Hamana, H, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-04
Release date:2006-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)
To be Published
2CZE
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Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 complexed with UMP
Descriptor: CITRIC ACID, GLYCEROL, Orotidine 5'-phosphate decarboxylase, ...
Authors:Arai, R, Ito, K, Kishishita, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-13
Release date:2006-01-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 complexed with UMP
To be Published
2CWW
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Crystal structure of Thermus thermophilus TTHA1280, a putative SAM-dependent RNA methyltransferase, in complex with S-adenosyl-L-homocysteine
Descriptor: ACETIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Pioszak, A.A, Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine.
Acta Crystallogr.,Sect.F, 61, 2005
2CV4
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Crystal Structure of an Archaeal Peroxiredoxin from the Aerobic Hyperthermophilic Crenarchaeon Aeropyrum pernix K1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ISOPROPYL ALCOHOL, peroxiredoxin
Authors:Mizohata, E, Sakai, H, Fusatomi, E, Terada, T, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-31
Release date:2005-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of an Archaeal Peroxiredoxin from the Aerobic Hyperthermophilic Crenarchaeon Aeropyrum pernix K1
J.Mol.Biol., 354, 2005
2CZ2
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Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-1 crystal)
Descriptor: GLUTATHIONE, GLYCEROL, Maleylacetoacetate isomerase
Authors:Mizohata, E, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-10
Release date:2006-01-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-1 crystal)
To be Published
2CXE
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Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)
Descriptor: Ribulose bisphosphate carboxylase
Authors:Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-28
Release date:2005-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)
To be Published
2CZD
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Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 at 1.6 A resolution
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Arai, R, Ito, K, Kamo-Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-13
Release date:2006-01-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 at 1.6 A resolution
To be Published
2CZH
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Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) with phosphate ion (orthorhombic form)
Descriptor: Inositol monophosphatase 2, PHOSPHATE ION
Authors:Ito, K, Arai, R, Kamo-Uchikubo, T, Ohnishi, T, Ohba, H, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-13
Release date:2006-07-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures
Proteins, 67, 2007
2DUC
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Crystal structure of SARS coronavirus main proteinase(3CLPRO)
Descriptor: Replicase polyprotein 1ab
Authors:Wang, H, Kim, Y.T, Muramatsu, T, Takemoto, C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-21
Release date:2007-07-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:SARS-CoV 3CL protease cleaves its C-terminal autoprocessing site by novel subsite cooperativity
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2D8N
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Crystal structure of human recoverin at 2.2 A resolution
Descriptor: Recoverin
Authors:Kamo, S, Kishishita, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-07
Release date:2007-02-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human recoverin at 2.2 A resolution
To be Published

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