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PDB: 412 results

3E5J
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Crystal structure of CYP105P1 wild-type ligand-free form
Descriptor: Cytochrome P450 (Cytochrome P450 hydroxylase), PROTOPORPHYRIN IX CONTAINING FE
Authors:Xu, L.H, Fushinobu, S, Ikeda, H, Wakagi, T, Shoun, H.
Deposit date:2008-08-14
Release date:2008-12-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of cytochrome P450 105P1 from Streptomyces avermitilis: conformational flexibility and histidine ligation state
J.Bacteriol., 191, 2009
3VPG
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L-lactate dehydrogenase from Thermus caldophilus GK24
Descriptor: GLYCEROL, L-lactate dehydrogenase
Authors:Arai, K, Ohno, T, Miyanaga, A, Fushinobu, S, Taguchi, H.
Deposit date:2012-03-01
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The core of allosteric motion in Thermus caldophilus L-lactate dehydrogenase.
J.Biol.Chem., 2014
1J3P
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Crystal structure of Thermococcus litoralis phosphoglucose isomerase
Descriptor: FE (III) ION, Phosphoglucose Isomerase
Authors:Jeong, J.-J, Fushinobu, S, Ito, S, Hidaka, M, Shoun, H, Wakagi, T.
Deposit date:2003-02-11
Release date:2004-02-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of a novel cupin-type phosphoglucose isomerase
To be Published
3E5K
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Crystal structure of CYP105P1 wild-type 4-phenylimidazole complex
Descriptor: 4-PHENYL-1H-IMIDAZOLE, Cytochrome P450 (Cytochrome P450 hydroxylase), PROTOPORPHYRIN IX CONTAINING FE
Authors:Xu, L.H, Fushinobu, S, Ikeda, H, Wakagi, T, Shoun, H.
Deposit date:2008-08-14
Release date:2008-12-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of cytochrome P450 105P1 from Streptomyces avermitilis: conformational flexibility and histidine ligation state
J.Bacteriol., 191, 2009
1J3R
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BU of 1j3r by Molmil
Crystal structure of Thermococcus litoralis phosphogrucose isomerase complexed with gluconate-6-phosphate
Descriptor: 6-PHOSPHOGLUCONIC ACID, FE (III) ION, Phosphoglucose Isomerase
Authors:Jeong, J.-J, Fushinobu, S, Ito, S, Hidaka, M, Shoun, H, Wakagi, T.
Deposit date:2003-02-11
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal structure of a novel cupin-type phosphoglucose isomerase
To be Published
3WH5
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Crystal structure of GH1 beta-glucosidase Td2F2
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, SODIUM ION, ...
Authors:Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
Deposit date:2013-08-21
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2.
Febs J., 283, 2016
1J3Q
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Crystal structure of Thermococcus litoralis phosphogrucose isomerase soaked with FeSO4
Descriptor: FE (III) ION, Phosphoglucose Isomerase
Authors:Jeong, J.-J, Fushinobu, S, Ito, S, Hidaka, M, Shoun, H, Wakagi, T.
Deposit date:2003-02-11
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a novel cupin-type phosphoglucose isomerase
To be Published
3E5L
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BU of 3e5l by Molmil
Crystal structure of CYP105P1 H72A mutant
Descriptor: Cytochrome P450 (Cytochrome P450 hydroxylase), PROTOPORPHYRIN IX CONTAINING FE
Authors:Xu, L.H, Fushinobu, S, Ikeda, H, Wakagi, T, Shoun, H.
Deposit date:2008-08-14
Release date:2008-12-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of cytochrome P450 105P1 from Streptomyces avermitilis: conformational flexibility and histidine ligation state
J.Bacteriol., 191, 2009
4IIB
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BU of 4iib by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
5YB7
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L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-ornithine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-amino acid oxidase/monooxygenase, L-ornithine
Authors:Im, D, Matsui, D, Arakawa, T, Isobe, K, Asano, Y, Fushinobu, S.
Deposit date:2017-09-03
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand complex structures of l-amino acid oxidase/monooxygenase from
FEBS Open Bio, 8, 2018
3EQO
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Crystal structure of beta-1,3-glucanase from Phanerochaete chrysosporium (Lam55A) gluconolactone complex
Descriptor: D-glucono-1,5-lactone, Glucan 1,3-beta-glucosidase, ZINC ION, ...
Authors:Ishida, T, Fushinobu, S, Kawai, R, Kitaoka, M, Igarashi, K, Samejima, M.
Deposit date:2008-10-01
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of glycoside hydrolase family 55 beta -1,3-glucanase from the basidiomycete Phanerochaete chrysosporium
J.Biol.Chem., 284, 2009
4IID
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BU of 4iid by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with 1-deoxynojirimycin
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-DEOXYNOJIRIMYCIN, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
4IIC
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BU of 4iic by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
4EI7
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Crystal structure of Bacillus cereus TubZ, GDP-form
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Plasmid replication protein RepX
Authors:Hayashi, I, Hoshino, S.
Deposit date:2012-04-05
Release date:2012-08-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Filament formation of the FtsZ/tubulin-like protein TubZ from the Bacillus cereus pXO1 plasmid.
J.Biol.Chem., 287, 2012
4IIE
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BU of 4iie by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with calystegine B(2)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
4EI9
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Crystal structure of Bacillus cereus TubZ, GTP-form
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Plasmid replication protein RepX
Authors:Hayashi, I, Hoshino, S.
Deposit date:2012-04-05
Release date:2012-08-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Filament formation of the FtsZ/tubulin-like protein TubZ from the Bacillus cereus pXO1 plasmid.
J.Biol.Chem., 287, 2012
5YB6
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L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-lysine complex
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, FLAVIN-ADENINE DINUCLEOTIDE, L-amino acid oxidase/monooxygenase, ...
Authors:Im, D, Matsui, D, Arakawa, T, Isobe, K, Asano, Y, Fushinobu, S.
Deposit date:2017-09-03
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand complex structures of l-amino acid oxidase/monooxygenase from
FEBS Open Bio, 8, 2018
3WH6
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BU of 3wh6 by Molmil
Crystal structure of GH1 beta-glucosidase Td2F2 glucose complex
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, alpha-D-glucopyranose, ...
Authors:Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
Deposit date:2013-08-21
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2.
Febs J., 283, 2016
3WMT
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BU of 3wmt by Molmil
Crystal structure of feruloyl esterase B from Aspergillus oryzae
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Probable feruloyl esterase B-1
Authors:Suzuki, K, Ishida, T, Igarashi, K, Koseki, T, Fushinobu, S.
Deposit date:2013-11-25
Release date:2014-08-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a feruloyl esterase belonging to the tannase family: a disulfide bond near a catalytic triad.
Proteins, 82, 2014
3WH7
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BU of 3wh7 by Molmil
Crystal structure of GH1 beta-glucosidase Td2F2 L-fucose complex
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, beta-D-fucopyranose, ...
Authors:Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
Deposit date:2013-08-21
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2.
Febs J., 283, 2016
3WH8
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Crystal structure of GH1 beta-glucosidase Td2F2 isofagomine complex
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, GLYCEROL, ...
Authors:Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
Deposit date:2013-08-21
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2.
Febs J., 283, 2016
5YB8
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L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-arginine complex
Descriptor: ARGININE, FLAVIN-ADENINE DINUCLEOTIDE, L-amino acid oxidase/monooxygenase
Authors:Im, D, Matsui, D, Arakawa, T, Isobe, K, Asano, Y, Fushinobu, S.
Deposit date:2017-09-03
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand complex structures of l-amino acid oxidase/monooxygenase from
FEBS Open Bio, 8, 2018
4IIF
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BU of 4iif by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with castanospermine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
4IIG
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BU of 4iig by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with D-glucose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
1IRE
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BU of 1ire by Molmil
Crystal Structure of Co-type nitrile hydratase from Pseudonocardia thermophila
Descriptor: COBALT (II) ION, Nitrile Hydratase
Authors:Miyanaga, A, Fushinobu, S, Ito, K, Wakagi, T.
Deposit date:2001-10-01
Release date:2002-10-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of cobalt-containing nitrile hydratase.
Biochem.Biophys.Res.Commun., 288, 2001

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